EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000001168 (Gene tree)
Gene ID: -
Gene Symbol: XRCC6
Alias: D22S671|D22S731|G22P1|KU70|ML8
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 18869 bases
Position: chrGeneScaffold_599:211523-230391
Accession: 4055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000001101	SAP	PF02037.27	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000001168	XRCC6-201	1827	-	ENSPVAP00000001101	608 (aa)	-	UPI00018B4759

Gene Model

Click here to download ENSPVAG00000001168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000001168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000001168	XRCC6	99	84.704	ENSG00000196419	XRCC6	99	85.033	Homo_sapiens
ENSPVAG00000001168	XRCC6	99	54.290	ENSAPOG00000012704	xrcc6	99	54.785	Acanthochromis_polyacanthus
ENSPVAG00000001168	XRCC6	99	55.281	ENSACIG00000021277	xrcc6	99	55.446	Amphilophus_citrinellus
ENSPVAG00000001168	XRCC6	99	54.455	ENSAOCG00000021344	xrcc6	99	54.455	Amphiprion_ocellaris
ENSPVAG00000001168	XRCC6	99	54.785	ENSAPEG00000020712	xrcc6	99	54.785	Amphiprion_percula
ENSPVAG00000001168	XRCC6	99	54.455	ENSATEG00000007119	xrcc6	99	54.950	Anabas_testudineus
ENSPVAG00000001168	XRCC6	91	68.897	ENSAPLG00000004469	XRCC6	99	68.897	Anas_platyrhynchos
ENSPVAG00000001168	XRCC6	99	84.539	ENSANAG00000018684	XRCC6	99	84.926	Aotus_nancymaae
ENSPVAG00000001168	XRCC6	99	75.413	ENSANAG00000020017	-	99	75.083	Aotus_nancymaae
ENSPVAG00000001168	XRCC6	99	73.520	ENSANAG00000035230	-	99	74.013	Aotus_nancymaae
ENSPVAG00000001168	XRCC6	99	72.250	ENSANAG00000023445	-	99	72.578	Aotus_nancymaae
ENSPVAG00000001168	XRCC6	99	55.446	ENSACLG00000018608	xrcc6	99	55.941	Astatotilapia_calliptera
ENSPVAG00000001168	XRCC6	99	55.611	ENSAMXG00000007545	xrcc6	99	55.611	Astyanax_mexicanus
ENSPVAG00000001168	XRCC6	99	84.539	ENSCJAG00000045512	XRCC6	99	84.868	Callithrix_jacchus
ENSPVAG00000001168	XRCC6	100	84.918	ENSTSYG00000011348	XRCC6	100	85.082	Carlito_syrichta
ENSPVAG00000001168	XRCC6	99	67.763	ENSCCAG00000035711	-	99	67.928	Cebus_capucinus
ENSPVAG00000001168	XRCC6	90	87.188	ENSCCAG00000030468	-	99	87.812	Cebus_capucinus
ENSPVAG00000001168	XRCC6	99	79.934	ENSCCAG00000030041	-	95	79.770	Cebus_capucinus
ENSPVAG00000001168	XRCC6	99	69.802	ENSCCAG00000037663	-	97	69.802	Cebus_capucinus
ENSPVAG00000001168	XRCC6	99	84.211	ENSCATG00000042366	XRCC6	99	84.539	Cercocebus_atys
ENSPVAG00000001168	XRCC6	100	85.057	ENSCLAG00000016669	XRCC6	100	85.057	Chinchilla_lanigera
ENSPVAG00000001168	XRCC6	99	84.211	ENSCSAG00000005784	XRCC6	99	84.539	Chlorocebus_sabaeus
ENSPVAG00000001168	XRCC6	99	73.727	ENSCPBG00000020535	XRCC6	99	74.056	Chrysemys_picta_bellii
ENSPVAG00000001168	XRCC6	99	34.102	ENSCING00000000633	-	96	34.524	Ciona_intestinalis
ENSPVAG00000001168	XRCC6	99	84.211	ENSCANG00000031032	XRCC6	99	84.539	Colobus_angolensis_palliatus
ENSPVAG00000001168	XRCC6	100	77.796	ENSCGRG00001019029	Xrcc6	100	77.796	Cricetulus_griseus_chok1gshd
ENSPVAG00000001168	XRCC6	100	84.704	ENSCGRG00000001528	Xrcc6	100	84.704	Cricetulus_griseus_crigri
ENSPVAG00000001168	XRCC6	99	54.918	ENSCSEG00000020434	xrcc6	99	54.918	Cynoglossus_semilaevis
ENSPVAG00000001168	XRCC6	99	55.848	ENSCVAG00000002189	xrcc6	99	55.848	Cyprinodon_variegatus
ENSPVAG00000001168	XRCC6	99	55.139	ENSDARG00000071551	xrcc6	100	55.628	Danio_rerio
ENSPVAG00000001168	XRCC6	78	80.000	ENSETEG00000015333	-	78	81.538	Echinops_telfairi
ENSPVAG00000001168	XRCC6	100	86.043	ENSEASG00005001514	XRCC6	100	86.864	Equus_asinus_asinus
ENSPVAG00000001168	XRCC6	100	85.550	ENSECAG00000017563	XRCC6	100	86.679	Equus_caballus
ENSPVAG00000001168	XRCC6	99	53.279	ENSELUG00000020301	xrcc6	99	53.279	Esox_lucius
ENSPVAG00000001168	XRCC6	99	68.197	ENSFALG00000011908	XRCC6	97	68.197	Ficedula_albicollis
ENSPVAG00000001168	XRCC6	99	57.237	ENSFHEG00000016833	xrcc6	99	57.049	Fundulus_heteroclitus
ENSPVAG00000001168	XRCC6	99	46.711	ENSGMOG00000013524	xrcc6	99	46.962	Gadus_morhua
ENSPVAG00000001168	XRCC6	99	67.267	ENSGALG00000011932	XRCC6	99	67.267	Gallus_gallus
ENSPVAG00000001168	XRCC6	99	54.918	ENSGAFG00000008130	xrcc6	99	54.918	Gambusia_affinis
ENSPVAG00000001168	XRCC6	99	52.597	ENSGACG00000004868	xrcc6	99	52.597	Gasterosteus_aculeatus
ENSPVAG00000001168	XRCC6	99	73.235	ENSGAGG00000017518	XRCC6	99	73.563	Gopherus_agassizii
ENSPVAG00000001168	XRCC6	99	84.539	ENSGGOG00000015885	XRCC6	99	84.868	Gorilla_gorilla
ENSPVAG00000001168	XRCC6	91	56.150	ENSHBUG00000023281	xrcc6	99	56.150	Haplochromis_burtoni
ENSPVAG00000001168	XRCC6	100	83.882	ENSHGLG00000018078	XRCC6	100	83.882	Heterocephalus_glaber_female
ENSPVAG00000001168	XRCC6	100	83.882	ENSHGLG00100011264	XRCC6	100	83.882	Heterocephalus_glaber_male
ENSPVAG00000001168	XRCC6	99	52.231	ENSHCOG00000009821	xrcc6	99	52.231	Hippocampus_comes
ENSPVAG00000001168	XRCC6	99	55.065	ENSIPUG00000000767	xrcc6	100	55.065	Ictalurus_punctatus
ENSPVAG00000001168	XRCC6	100	87.849	ENSSTOG00000009490	XRCC6	100	88.177	Ictidomys_tridecemlineatus
ENSPVAG00000001168	XRCC6	100	78.161	ENSJJAG00000017136	Xrcc6	100	79.146	Jaculus_jaculus
ENSPVAG00000001168	XRCC6	99	55.189	ENSKMAG00000002141	xrcc6	99	55.519	Kryptolebias_marmoratus
ENSPVAG00000001168	XRCC6	99	56.066	ENSLBEG00000002691	xrcc6	99	56.066	Labrus_bergylta
ENSPVAG00000001168	XRCC6	89	55.882	ENSLOCG00000011533	xrcc6	99	55.882	Lepisosteus_oculatus
ENSPVAG00000001168	XRCC6	99	84.211	ENSMFAG00000003352	XRCC6	99	84.539	Macaca_fascicularis
ENSPVAG00000001168	XRCC6	99	84.211	ENSMMUG00000001856	XRCC6	99	84.539	Macaca_mulatta
ENSPVAG00000001168	XRCC6	99	84.211	ENSMNEG00000035076	XRCC6	99	84.539	Macaca_nemestrina
ENSPVAG00000001168	XRCC6	99	84.211	ENSMLEG00000019869	XRCC6	99	84.539	Mandrillus_leucophaeus
ENSPVAG00000001168	XRCC6	96	53.231	ENSMAMG00000003405	xrcc6	97	53.231	Mastacembelus_armatus
ENSPVAG00000001168	XRCC6	99	53.783	ENSMAMG00000003368	xrcc6	99	53.947	Mastacembelus_armatus
ENSPVAG00000001168	XRCC6	99	55.116	ENSMZEG00005028080	xrcc6	99	55.611	Maylandia_zebra
ENSPVAG00000001168	XRCC6	99	67.267	ENSMGAG00000012146	XRCC6	99	67.047	Meleagris_gallopavo
ENSPVAG00000001168	XRCC6	99	84.679	ENSMAUG00000017340	Xrcc6	100	84.679	Mesocricetus_auratus
ENSPVAG00000001168	XRCC6	99	83.855	ENSMOCG00000015717	Xrcc6	100	83.855	Microtus_ochrogaster
ENSPVAG00000001168	XRCC6	99	53.377	ENSMMOG00000003536	xrcc6	99	52.787	Mola_mola
ENSPVAG00000001168	XRCC6	99	56.436	ENSMALG00000013912	xrcc6	94	57.096	Monopterus_albus
ENSPVAG00000001168	XRCC6	100	77.467	MGP_CAROLIEiJ_G0020067	Xrcc6	100	77.467	Mus_caroli
ENSPVAG00000001168	XRCC6	100	83.717	ENSMUSG00000022471	Xrcc6	100	83.717	Mus_musculus
ENSPVAG00000001168	XRCC6	100	82.895	MGP_PahariEiJ_G0020069	Xrcc6	100	82.895	Mus_pahari
ENSPVAG00000001168	XRCC6	97	83.022	MGP_SPRETEiJ_G0020967	Xrcc6	100	83.362	Mus_spretus
ENSPVAG00000001168	XRCC6	100	84.375	ENSNGAG00000013750	Xrcc6	100	84.375	Nannospalax_galili
ENSPVAG00000001168	XRCC6	99	56.106	ENSNBRG00000004125	xrcc6	99	56.601	Neolamprologus_brichardi
ENSPVAG00000001168	XRCC6	95	83.276	ENSOPRG00000002386	XRCC6	99	83.276	Ochotona_princeps
ENSPVAG00000001168	XRCC6	100	82.102	ENSODEG00000015847	XRCC6	100	82.266	Octodon_degus
ENSPVAG00000001168	XRCC6	99	56.766	ENSONIG00000019715	xrcc6	99	56.766	Oreochromis_niloticus
ENSPVAG00000001168	XRCC6	68	77.724	ENSOANG00000011328	XRCC6	99	77.724	Ornithorhynchus_anatinus
ENSPVAG00000001168	XRCC6	99	85.008	ENSOCUG00000006948	XRCC6	99	85.997	Oryctolagus_cuniculus
ENSPVAG00000001168	XRCC6	99	54.337	ENSORLG00020007820	xrcc6	99	54.337	Oryzias_latipes_hni
ENSPVAG00000001168	XRCC6	99	53.519	ENSORLG00015006406	xrcc6	99	53.682	Oryzias_latipes_hsok
ENSPVAG00000001168	XRCC6	99	53.519	ENSOMEG00000008998	xrcc6	99	53.846	Oryzias_melastigma
ENSPVAG00000001168	XRCC6	99	86.020	ENSOGAG00000008821	XRCC6	100	86.678	Otolemur_garnettii
ENSPVAG00000001168	XRCC6	99	74.342	ENSPPAG00000037167	XRCC6	99	74.671	Pan_paniscus
ENSPVAG00000001168	XRCC6	99	84.704	ENSPTRG00000045824	XRCC6	99	85.862	Pan_troglodytes
ENSPVAG00000001168	XRCC6	99	84.704	ENSPTRG00000022548	XRCC6	99	85.862	Pan_troglodytes
ENSPVAG00000001168	XRCC6	99	84.046	ENSPANG00000001252	XRCC6	99	85.172	Papio_anubis
ENSPVAG00000001168	XRCC6	99	58.007	ENSPKIG00000003974	xrcc6	100	57.516	Paramormyrops_kingsleyae
ENSPVAG00000001168	XRCC6	99	54.063	ENSPMGG00000014220	xrcc6	100	54.395	Periophthalmus_magnuspinnatus
ENSPVAG00000001168	XRCC6	100	84.375	ENSPEMG00000023446	Xrcc6	100	84.375	Peromyscus_maniculatus_bairdii
ENSPVAG00000001168	XRCC6	99	78.161	ENSPCIG00000026409	XRCC6	99	78.489	Phascolarctos_cinereus
ENSPVAG00000001168	XRCC6	99	55.410	ENSPFOG00000017173	xrcc6	99	55.410	Poecilia_formosa
ENSPVAG00000001168	XRCC6	99	55.246	ENSPLAG00000000562	xrcc6	99	55.246	Poecilia_latipinna
ENSPVAG00000001168	XRCC6	99	55.574	ENSPMEG00000018478	xrcc6	99	55.574	Poecilia_mexicana
ENSPVAG00000001168	XRCC6	99	55.392	ENSPREG00000020957	xrcc6	93	55.719	Poecilia_reticulata
ENSPVAG00000001168	XRCC6	99	74.507	ENSPPYG00000011876	XRCC6	99	74.836	Pongo_abelii
ENSPVAG00000001168	XRCC6	99	55.446	ENSPNYG00000003815	xrcc6	99	53.218	Pundamilia_nyererei
ENSPVAG00000001168	XRCC6	100	83.224	ENSRNOG00000006392	Xrcc6	100	83.224	Rattus_norvegicus
ENSPVAG00000001168	XRCC6	99	77.961	ENSRBIG00000039794	XRCC6	99	78.289	Rhinopithecus_bieti
ENSPVAG00000001168	XRCC6	99	84.211	ENSRROG00000030297	XRCC6	99	84.539	Rhinopithecus_roxellana
ENSPVAG00000001168	XRCC6	67	72.167	ENSSBOG00000024724	-	99	71.921	Saimiri_boliviensis_boliviensis
ENSPVAG00000001168	XRCC6	99	77.340	ENSSHAG00000010790	XRCC6	99	77.833	Sarcophilus_harrisii
ENSPVAG00000001168	XRCC6	99	58.007	ENSSFOG00015014409	xrcc6	100	58.170	Scleropages_formosus
ENSPVAG00000001168	XRCC6	99	55.611	ENSSMAG00000006496	xrcc6	99	55.776	Scophthalmus_maximus
ENSPVAG00000001168	XRCC6	99	55.082	ENSSDUG00000007542	xrcc6	99	55.574	Seriola_dumerili
ENSPVAG00000001168	XRCC6	99	54.590	ENSSLDG00000009974	xrcc6	99	55.082	Seriola_lalandi_dorsalis
ENSPVAG00000001168	XRCC6	99	73.235	ENSSPUG00000012086	XRCC6	99	73.563	Sphenodon_punctatus
ENSPVAG00000001168	XRCC6	99	54.918	ENSSPAG00000015199	xrcc6	99	55.410	Stegastes_partitus
ENSPVAG00000001168	XRCC6	95	69.948	ENSTGUG00000009852	-	100	68.249	Taeniopygia_guttata
ENSPVAG00000001168	XRCC6	99	54.711	ENSTRUG00000017070	xrcc6	99	54.876	Takifugu_rubripes
ENSPVAG00000001168	XRCC6	95	55.763	ENSTNIG00000012947	xrcc6	99	55.763	Tetraodon_nigroviridis
ENSPVAG00000001168	XRCC6	95	77.586	ENSTBEG00000011736	XRCC6	99	77.453	Tupaia_belangeri
ENSPVAG00000001168	XRCC6	99	71.711	ENSTTRG00000006749	XRCC6	99	72.368	Tursiops_truncatus
ENSPVAG00000001168	XRCC6	99	55.574	ENSXMAG00000009691	xrcc6	99	55.574	Xiphophorus_maculatus