EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000001436 (Gene tree)
Gene ID: -
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 21996 bases
Position: chrGeneScaffold_2511:1160-23155
Accession: 23818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000001352	Nop52	PF05997.12	1.7e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000001436	RRP1B-201	2268	-	ENSPVAP00000001352	755 (aa)	-	UPI00018B1214

Gene Model

Click here to download ENSPVAG00000001436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000001436's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000001436	RRP1B	99	66.886	ENSG00000160208	RRP1B	99	66.623	Homo_sapiens
ENSPVAG00000001436	RRP1B	63	45.113	ENSAPOG00000007490	-	53	41.830	Acanthochromis_polyacanthus
ENSPVAG00000001436	RRP1B	71	76.984	ENSAMEG00000011401	RRP1B	79	76.984	Ailuropoda_melanoleuca
ENSPVAG00000001436	RRP1B	57	47.222	ENSAOCG00000017894	-	97	50.000	Amphiprion_ocellaris
ENSPVAG00000001436	RRP1B	63	42.520	ENSAPEG00000024150	-	50	43.750	Amphiprion_percula
ENSPVAG00000001436	RRP1B	94	42.780	ENSAPLG00000004310	RRP1B	100	42.005	Anas_platyrhynchos
ENSPVAG00000001436	RRP1B	99	65.879	ENSANAG00000034889	RRP1B	99	65.748	Aotus_nancymaae
ENSPVAG00000001436	RRP1B	99	64.729	ENSBTAG00000017418	RRP1B	99	63.720	Bos_taurus
ENSPVAG00000001436	RRP1B	99	63.158	ENSCJAG00000017077	RRP1B	99	63.026	Callithrix_jacchus
ENSPVAG00000001436	RRP1B	94	64.993	ENSCAFG00000010621	RRP1B	99	64.993	Canis_familiaris
ENSPVAG00000001436	RRP1B	99	65.789	ENSCAFG00020018901	RRP1B	99	65.921	Canis_lupus_dingo
ENSPVAG00000001436	RRP1B	99	64.550	ENSCHIG00000021519	RRP1B	99	63.408	Capra_hircus
ENSPVAG00000001436	RRP1B	99	54.485	ENSCPOG00000002396	RRP1B	99	53.088	Cavia_porcellus
ENSPVAG00000001436	RRP1B	99	64.136	ENSCCAG00000029384	RRP1B	99	63.874	Cebus_capucinus
ENSPVAG00000001436	RRP1B	99	65.314	ENSCATG00000017423	RRP1B	99	65.177	Cercocebus_atys
ENSPVAG00000001436	RRP1B	99	55.612	ENSCLAG00000005622	RRP1B	99	54.307	Chinchilla_lanigera
ENSPVAG00000001436	RRP1B	99	64.889	ENSCSAG00000007961	RRP1B	99	64.491	Chlorocebus_sabaeus
ENSPVAG00000001436	RRP1B	51	55.181	ENSCHOG00000002426	-	64	55.181	Choloepus_hoffmanni
ENSPVAG00000001436	RRP1B	94	44.399	ENSCPBG00000010310	RRP1B	98	44.415	Chrysemys_picta_bellii
ENSPVAG00000001436	RRP1B	99	65.576	ENSCANG00000040952	RRP1B	99	65.177	Colobus_angolensis_palliatus
ENSPVAG00000001436	RRP1B	99	55.599	ENSCGRG00001023882	-	99	55.263	Cricetulus_griseus_chok1gshd
ENSPVAG00000001436	RRP1B	99	55.731	ENSCGRG00001010889	-	99	55.395	Cricetulus_griseus_chok1gshd
ENSPVAG00000001436	RRP1B	94	54.596	ENSCGRG00000001553	Rrp1b	97	54.381	Cricetulus_griseus_crigri
ENSPVAG00000001436	RRP1B	58	52.809	ENSCSEG00000020711	-	83	53.333	Cynoglossus_semilaevis
ENSPVAG00000001436	RRP1B	99	58.947	ENSDNOG00000032774	RRP1B	99	58.870	Dasypus_novemcinctus
ENSPVAG00000001436	RRP1B	54	42.718	ENSDNOG00000019880	RRP1	52	61.039	Dasypus_novemcinctus
ENSPVAG00000001436	RRP1B	93	52.448	ENSDORG00000005496	Rrp1b	100	53.007	Dipodomys_ordii
ENSPVAG00000001436	RRP1B	99	53.088	ENSETEG00000019489	RRP1B	99	51.036	Echinops_telfairi
ENSPVAG00000001436	RRP1B	99	70.317	ENSEASG00005001687	RRP1B	99	70.053	Equus_asinus_asinus
ENSPVAG00000001436	RRP1B	99	70.317	ENSECAG00000018018	RRP1B	99	70.053	Equus_caballus
ENSPVAG00000001436	RRP1B	64	50.781	ENSELUG00000015885	-	89	41.523	Esox_lucius
ENSPVAG00000001436	RRP1B	99	64.690	ENSFCAG00000010272	RRP1B	99	64.559	Felis_catus
ENSPVAG00000001436	RRP1B	96	55.433	ENSFDAG00000010899	RRP1B	96	55.571	Fukomys_damarensis
ENSPVAG00000001436	RRP1B	71	38.554	ENSFHEG00000016314	-	66	38.554	Fundulus_heteroclitus
ENSPVAG00000001436	RRP1B	99	42.219	ENSGALG00000035696	RRP1B	99	42.416	Gallus_gallus
ENSPVAG00000001436	RRP1B	50	49.153	ENSGACG00000001438	rrp1	57	49.153	Gasterosteus_aculeatus
ENSPVAG00000001436	RRP1B	99	66.754	ENSGGOG00000012069	RRP1B	99	66.491	Gorilla_gorilla
ENSPVAG00000001436	RRP1B	99	55.658	ENSHGLG00000004968	RRP1B	100	56.636	Heterocephalus_glaber_female
ENSPVAG00000001436	RRP1B	77	59.244	ENSHGLG00100002232	RRP1B	78	59.244	Heterocephalus_glaber_male
ENSPVAG00000001436	RRP1B	66	40.278	ENSHCOG00000018388	-	64	40.972	Hippocampus_comes
ENSPVAG00000001436	RRP1B	99	58.245	ENSSTOG00000011790	RRP1B	96	59.079	Ictidomys_tridecemlineatus
ENSPVAG00000001436	RRP1B	99	53.153	ENSJJAG00000021279	Rrp1b	99	52.442	Jaculus_jaculus
ENSPVAG00000001436	RRP1B	50	49.378	ENSKMAG00000005539	rrp1	75	42.759	Kryptolebias_marmoratus
ENSPVAG00000001436	RRP1B	99	38.163	ENSLACG00000017332	-	75	47.059	Latimeria_chalumnae
ENSPVAG00000001436	RRP1B	63	50.394	ENSLOCG00000004064	-	70	50.758	Lepisosteus_oculatus
ENSPVAG00000001436	RRP1B	88	56.130	ENSLAFG00000000766	RRP1B	95	60.046	Loxodonta_africana
ENSPVAG00000001436	RRP1B	99	65.314	ENSMFAG00000039152	RRP1B	99	64.575	Macaca_fascicularis
ENSPVAG00000001436	RRP1B	99	62.958	ENSMMUG00000000104	RRP1B	99	61.961	Macaca_mulatta
ENSPVAG00000001436	RRP1B	99	65.314	ENSMNEG00000034269	RRP1B	99	64.575	Macaca_nemestrina
ENSPVAG00000001436	RRP1B	95	64.000	ENSMLEG00000040044	RRP1B	99	63.700	Mandrillus_leucophaeus
ENSPVAG00000001436	RRP1B	99	41.952	ENSMGAG00000014591	RRP1B	99	41.923	Meleagris_gallopavo
ENSPVAG00000001436	RRP1B	99	54.677	ENSMAUG00000021508	Rrp1b	99	54.474	Mesocricetus_auratus
ENSPVAG00000001436	RRP1B	99	64.947	ENSMICG00000004686	RRP1B	99	64.954	Microcebus_murinus
ENSPVAG00000001436	RRP1B	99	53.947	ENSMOCG00000001117	Rrp1b	99	53.614	Microtus_ochrogaster
ENSPVAG00000001436	RRP1B	99	59.555	ENSMODG00000021033	RRP1B	99	59.477	Monodelphis_domestica
ENSPVAG00000001436	RRP1B	99	53.088	MGP_CAROLIEiJ_G0021376	Rrp1b	99	53.482	Mus_caroli
ENSPVAG00000001436	RRP1B	99	52.037	ENSMUSG00000058392	Rrp1b	99	52.037	Mus_musculus
ENSPVAG00000001436	RRP1B	99	54.809	MGP_PahariEiJ_G0023695	Rrp1b	99	54.605	Mus_pahari
ENSPVAG00000001436	RRP1B	99	51.905	MGP_SPRETEiJ_G0022290	Rrp1b	99	52.431	Mus_spretus
ENSPVAG00000001436	RRP1B	84	57.477	ENSMPUG00000009810	RRP1B	99	56.786	Mustela_putorius_furo
ENSPVAG00000001436	RRP1B	100	71.260	ENSMLUG00000007738	RRP1B	100	70.604	Myotis_lucifugus
ENSPVAG00000001436	RRP1B	99	55.020	ENSNGAG00000021073	Rrp1b	99	55.878	Nannospalax_galili
ENSPVAG00000001436	RRP1B	99	62.794	ENSNLEG00000001490	RRP1B	99	62.924	Nomascus_leucogenys
ENSPVAG00000001436	RRP1B	83	86.325	ENSMEUG00000003226	-	80	85.593	Notamacropus_eugenii
ENSPVAG00000001436	RRP1B	99	54.749	ENSODEG00000013177	RRP1B	99	53.194	Octodon_degus
ENSPVAG00000001436	RRP1B	99	47.258	ENSOANG00000006470	RRP1B	99	47.382	Ornithorhynchus_anatinus
ENSPVAG00000001436	RRP1B	94	49.590	ENSOCUG00000025931	RRP1B	100	48.837	Oryctolagus_cuniculus
ENSPVAG00000001436	RRP1B	60	52.688	ENSORLG00020007199	-	55	53.763	Oryzias_latipes_hni
ENSPVAG00000001436	RRP1B	67	42.759	ENSORLG00015004425	-	61	41.067	Oryzias_latipes_hsok
ENSPVAG00000001436	RRP1B	67	44.595	ENSOMEG00000016910	-	60	41.781	Oryzias_melastigma
ENSPVAG00000001436	RRP1B	83	69.173	ENSOGAG00000009872	RRP1B	85	69.173	Otolemur_garnettii
ENSPVAG00000001436	RRP1B	94	61.765	ENSOARG00000011314	RRP1B	100	60.280	Ovis_aries
ENSPVAG00000001436	RRP1B	94	65.229	ENSPPAG00000035319	RRP1B	99	64.861	Pan_paniscus
ENSPVAG00000001436	RRP1B	99	64.822	ENSPPRG00000010356	RRP1B	99	64.427	Panthera_pardus
ENSPVAG00000001436	RRP1B	80	72.603	ENSPTIG00000016894	RRP1B	97	63.210	Panthera_tigris_altaica
ENSPVAG00000001436	RRP1B	99	66.754	ENSPTRG00000013958	RRP1B	99	66.491	Pan_troglodytes
ENSPVAG00000001436	RRP1B	99	65.707	ENSPANG00000011090	RRP1B	99	65.309	Papio_anubis
ENSPVAG00000001436	RRP1B	66	51.163	ENSPKIG00000003422	-	60	51.163	Paramormyrops_kingsleyae
ENSPVAG00000001436	RRP1B	99	55.863	ENSPEMG00000022490	Rrp1b	99	55.789	Peromyscus_maniculatus_bairdii
ENSPVAG00000001436	RRP1B	99	57.217	ENSPCIG00000015513	RRP1B	99	57.273	Phascolarctos_cinereus
ENSPVAG00000001436	RRP1B	66	43.151	ENSPMEG00000007042	-	60	43.151	Poecilia_mexicana
ENSPVAG00000001436	RRP1B	99	66.491	ENSPPYG00000011470	RRP1B	99	66.229	Pongo_abelii
ENSPVAG00000001436	RRP1B	85	77.895	ENSPCAG00000013723	RRP1B	91	77.895	Procavia_capensis
ENSPVAG00000001436	RRP1B	99	64.683	ENSPCOG00000017927	RRP1B	99	63.672	Propithecus_coquereli
ENSPVAG00000001436	RRP1B	99	55.995	ENSRNOG00000001194	Rrp1b	99	55.789	Rattus_norvegicus
ENSPVAG00000001436	RRP1B	99	62.073	ENSRBIG00000041689	RRP1B	99	61.235	Rhinopithecus_bieti
ENSPVAG00000001436	RRP1B	99	66.010	ENSRROG00000031499	RRP1B	99	65.440	Rhinopithecus_roxellana
ENSPVAG00000001436	RRP1B	94	60.054	ENSSBOG00000034727	RRP1B	99	58.988	Saimiri_boliviensis_boliviensis
ENSPVAG00000001436	RRP1B	50	40.885	ENSSBOG00000034689	RRP1	57	57.258	Saimiri_boliviensis_boliviensis
ENSPVAG00000001436	RRP1B	99	58.954	ENSSHAG00000017789	RRP1B	99	57.908	Sarcophilus_harrisii
ENSPVAG00000001436	RRP1B	64	45.669	ENSSMAG00000016847	-	59	52.966	Scophthalmus_maximus
ENSPVAG00000001436	RRP1B	66	46.923	ENSSDUG00000000551	-	56	42.568	Seriola_dumerili
ENSPVAG00000001436	RRP1B	66	46.923	ENSSLDG00000002538	-	56	42.568	Seriola_lalandi_dorsalis
ENSPVAG00000001436	RRP1B	58	74.611	ENSSARG00000003108	-	57	74.611	Sorex_araneus
ENSPVAG00000001436	RRP1B	74	55.738	ENSSPUG00000002834	RRP1B	73	52.604	Sphenodon_punctatus
ENSPVAG00000001436	RRP1B	50	48.855	ENSSPAG00000005370	-	52	45.669	Stegastes_partitus
ENSPVAG00000001436	RRP1B	99	62.566	ENSSSCG00000021698	RRP1B	99	61.691	Sus_scrofa
ENSPVAG00000001436	RRP1B	81	65.205	ENSTBEG00000000422	RRP1B	100	65.625	Tupaia_belangeri
ENSPVAG00000001436	RRP1B	99	62.698	ENSTTRG00000000723	RRP1B	99	62.483	Tursiops_truncatus
ENSPVAG00000001436	RRP1B	99	60.658	ENSUAMG00000026765	RRP1B	64	68.707	Ursus_americanus
ENSPVAG00000001436	RRP1B	63	78.030	ENSUMAG00000025510	RRP1B	95	76.515	Ursus_maritimus
ENSPVAG00000001436	RRP1B	94	64.435	ENSVVUG00000024509	RRP1B	99	64.714	Vulpes_vulpes
ENSPVAG00000001436	RRP1B	62	51.613	ENSXMAG00000023123	-	62	51.613	Xiphophorus_maculatus