EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000001484 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 2602 bases
Position: chrGeneScaffold_3499:33255-35856
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000001397	KH_1	PF00013.29	2e-12	1	1
ENSPVAP00000001397	DEAD	PF00270.29	3.7e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000001484	-	1896	-	ENSPVAP00000001397	631 (aa)	-	UPI00018B4243

Gene Model

Click here to download ENSPVAG00000001484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000001484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000001484	-	60	39.948	ENSPVAG00000002448	DDX4	56	39.747
ENSPVAG00000001484	-	61	33.498	ENSPVAG00000002640	DDX47	86	33.498
ENSPVAG00000001484	-	58	31.283	ENSPVAG00000002569	DDX59	63	31.186
ENSPVAG00000001484	-	54	33.051	ENSPVAG00000015468	DDX49	71	33.051
ENSPVAG00000001484	-	54	30.939	ENSPVAG00000015321	DDX55	59	30.939
ENSPVAG00000001484	-	55	32.464	ENSPVAG00000003627	EIF4A3	82	32.464
ENSPVAG00000001484	-	61	36.524	ENSPVAG00000007784	DDX41	64	36.010
ENSPVAG00000001484	-	56	35.753	ENSPVAG00000006823	DDX18	54	35.753
ENSPVAG00000001484	-	55	31.250	ENSPVAG00000016297	EIF4A1	88	30.874
ENSPVAG00000001484	-	71	37.917	ENSPVAG00000009818	DDX23	55	37.917
ENSPVAG00000001484	-	77	31.089	ENSPVAG00000010462	DDX52	69	33.176
ENSPVAG00000001484	-	72	43.939	ENSPVAG00000010133	DDX17	62	43.683
ENSPVAG00000001484	-	59	40.513	ENSPVAG00000014651	DDX3X	61	40.541
ENSPVAG00000001484	-	89	72.920	ENSPVAG00000012718	-	99	72.566
ENSPVAG00000001484	-	69	43.820	ENSPVAG00000001932	DDX5	75	42.616

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000001484	-	95	76.962	ENSAMEG00000019953	-	97	77.311	Ailuropoda_melanoleuca
ENSPVAG00000001484	-	94	75.253	ENSBTAG00000046635	-	94	75.773	Bos_taurus
ENSPVAG00000001484	-	60	77.690	ENSCAFG00020005312	-	82	77.487	Canis_lupus_dingo
ENSPVAG00000001484	-	97	75.327	ENSCHIG00000020582	-	99	74.673	Capra_hircus
ENSPVAG00000001484	-	99	64.750	ENSCPOG00000013960	-	99	64.599	Cavia_porcellus
ENSPVAG00000001484	-	94	68.033	ENSCLAG00000017424	-	91	68.033	Chinchilla_lanigera
ENSPVAG00000001484	-	99	75.955	ENSEASG00005001728	-	97	75.796	Equus_asinus_asinus
ENSPVAG00000001484	-	99	75.478	ENSECAG00000035665	-	100	75.318	Equus_caballus
ENSPVAG00000001484	-	99	75.318	ENSECAG00000037015	DDX53	100	75.159	Equus_caballus
ENSPVAG00000001484	-	50	83.333	ENSEEUG00000008838	-	70	83.333	Erinaceus_europaeus
ENSPVAG00000001484	-	69	65.826	ENSFDAG00000018215	-	86	67.839	Fukomys_damarensis
ENSPVAG00000001484	-	79	69.153	ENSFDAG00000020660	-	97	69.153	Fukomys_damarensis
ENSPVAG00000001484	-	95	74.086	ENSSTOG00000027719	-	79	74.242	Ictidomys_tridecemlineatus
ENSPVAG00000001484	-	99	73.089	ENSLAFG00000011531	-	99	73.016	Loxodonta_africana
ENSPVAG00000001484	-	94	78.487	ENSMPUG00000019441	-	97	78.487	Mustela_putorius_furo
ENSPVAG00000001484	-	99	72.841	ENSMLUG00000022321	-	99	71.743	Myotis_lucifugus
ENSPVAG00000001484	-	94	74.790	ENSMLUG00000022233	-	98	74.707	Myotis_lucifugus
ENSPVAG00000001484	-	93	72.743	ENSOCUG00000004437	-	100	69.388	Oryctolagus_cuniculus
ENSPVAG00000001484	-	99	68.304	ENSOGAG00000026282	-	94	70.658	Otolemur_garnettii
ENSPVAG00000001484	-	96	75.450	ENSOARG00000016525	-	100	74.795	Ovis_aries
ENSPVAG00000001484	-	99	74.119	ENSPPRG00000011327	-	100	74.198	Panthera_pardus
ENSPVAG00000001484	-	99	73.926	ENSPTIG00000001243	-	90	79.522	Panthera_tigris_altaica
ENSPVAG00000001484	-	99	75.556	ENSSSCG00000012169	-	100	75.397	Sus_scrofa
ENSPVAG00000001484	-	99	69.085	ENSTBEG00000014650	-	94	71.261	Tupaia_belangeri
ENSPVAG00000001484	-	59	50.133	ENSTBEG00000001513	-	87	52.083	Tupaia_belangeri
ENSPVAG00000001484	-	99	68.038	ENSTTRG00000016514	-	99	68.038	Tursiops_truncatus
ENSPVAG00000001484	-	95	78.798	ENSUAMG00000000177	-	93	79.160	Ursus_americanus
ENSPVAG00000001484	-	59	84.450	ENSUMAG00000011448	-	85	83.862	Ursus_maritimus
ENSPVAG00000001484	-	99	76.032	ENSVPAG00000007860	-	99	75.397	Vicugna_pacos
ENSPVAG00000001484	-	95	75.788	ENSVVUG00000012789	-	95	76.701	Vulpes_vulpes