EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000001511 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 12796 bases
Position: chrGeneScaffold_823:72646-85441
Accession: 105298691
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000001423	zf-C2H2	PF00096.26	5.4e-13	1	2
ENSPVAP00000001423	zf-C2H2	PF00096.26	5.4e-13	2	2
ENSPVAP00000001423	zf-met	PF12874.7	4.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000001511	PRDM12-201	1101	XM_011370060	ENSPVAP00000001423	366 (aa)	XP_011368362	UPI00018B3372

Gene Model

Click here to download ENSPVAG00000001511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000001511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000001511	PRDM12	60	41.573	ENSPVAG00000012309	PRDM5	92	43.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000001511	PRDM12	100	98.098	ENSG00000130711	PRDM12	100	98.098	Homo_sapiens
ENSPVAG00000001511	PRDM12	99	64.011	ENSAPOG00000018234	-	93	66.860	Acanthochromis_polyacanthus
ENSPVAG00000001511	PRDM12	99	74.870	ENSAPOG00000016051	prdm12b	90	80.580	Acanthochromis_polyacanthus
ENSPVAG00000001511	PRDM12	88	94.737	ENSAMEG00000016234	PRDM12	99	94.737	Ailuropoda_melanoleuca
ENSPVAG00000001511	PRDM12	99	75.452	ENSACIG00000005193	-	91	80.290	Amphilophus_citrinellus
ENSPVAG00000001511	PRDM12	99	74.803	ENSACIG00000019578	prdm12b	93	79.943	Amphilophus_citrinellus
ENSPVAG00000001511	PRDM12	99	76.178	ENSAOCG00000015040	prdm12b	92	80.286	Amphiprion_ocellaris
ENSPVAG00000001511	PRDM12	100	72.135	ENSAPEG00000022849	-	89	78.363	Amphiprion_percula
ENSPVAG00000001511	PRDM12	99	76.781	ENSAPEG00000015092	prdm12b	92	80.980	Amphiprion_percula
ENSPVAG00000001511	PRDM12	99	74.545	ENSATEG00000014595	-	96	82.317	Anabas_testudineus
ENSPVAG00000001511	PRDM12	93	99.118	ENSANAG00000020616	PRDM12	100	99.118	Aotus_nancymaae
ENSPVAG00000001511	PRDM12	99	77.717	ENSACLG00000011876	prdm12b	92	82.143	Astatotilapia_calliptera
ENSPVAG00000001511	PRDM12	89	81.579	ENSACLG00000007631	-	87	81.579	Astatotilapia_calliptera
ENSPVAG00000001511	PRDM12	99	78.082	ENSAMXG00000008540	PRDM12	90	84.356	Astyanax_mexicanus
ENSPVAG00000001511	PRDM12	99	82.480	ENSAMXG00000033665	prdm12b	90	88.323	Astyanax_mexicanus
ENSPVAG00000001511	PRDM12	100	97.268	ENSBTAG00000023797	PRDM12	100	97.268	Bos_taurus
ENSPVAG00000001511	PRDM12	100	96.721	ENSCJAG00000020540	PRDM12	100	96.721	Callithrix_jacchus
ENSPVAG00000001511	PRDM12	88	97.214	ENSCAFG00000023076	PRDM12	99	97.214	Canis_familiaris
ENSPVAG00000001511	PRDM12	100	98.361	ENSCAFG00020024046	PRDM12	100	98.361	Canis_lupus_dingo
ENSPVAG00000001511	PRDM12	100	97.814	ENSCHIG00000025005	PRDM12	100	97.814	Capra_hircus
ENSPVAG00000001511	PRDM12	93	92.059	ENSCPOG00000005901	PRDM12	95	97.764	Cavia_porcellus
ENSPVAG00000001511	PRDM12	100	97.541	ENSCCAG00000037485	PRDM12	100	97.541	Cebus_capucinus
ENSPVAG00000001511	PRDM12	100	97.541	ENSCATG00000020327	PRDM12	100	97.541	Cercocebus_atys
ENSPVAG00000001511	PRDM12	91	97.605	ENSCLAG00000005499	PRDM12	92	97.605	Chinchilla_lanigera
ENSPVAG00000001511	PRDM12	100	97.814	ENSCSAG00000014756	PRDM12	100	97.814	Chlorocebus_sabaeus
ENSPVAG00000001511	PRDM12	100	89.344	ENSCPBG00000022628	PRDM12	94	93.713	Chrysemys_picta_bellii
ENSPVAG00000001511	PRDM12	100	98.087	ENSCGRG00001015005	Prdm12	100	98.087	Cricetulus_griseus_chok1gshd
ENSPVAG00000001511	PRDM12	99	77.333	ENSCVAG00000017166	prdm12b	92	82.111	Cyprinodon_variegatus
ENSPVAG00000001511	PRDM12	99	72.564	ENSCVAG00000000944	-	90	77.778	Cyprinodon_variegatus
ENSPVAG00000001511	PRDM12	99	81.818	ENSDARG00000007430	prdm12b	93	86.257	Danio_rerio
ENSPVAG00000001511	PRDM12	99	97.541	ENSDNOG00000042302	PRDM12	99	97.541	Dasypus_novemcinctus
ENSPVAG00000001511	PRDM12	88	62.678	ENSEBUG00000016780	prdm12b	78	64.103	Eptatretus_burgeri
ENSPVAG00000001511	PRDM12	100	97.268	ENSEASG00005008472	PRDM12	100	97.268	Equus_asinus_asinus
ENSPVAG00000001511	PRDM12	100	96.995	ENSECAG00000005933	PRDM12	100	96.995	Equus_caballus
ENSPVAG00000001511	PRDM12	99	79.683	ENSELUG00000009905	prdm12b	91	85.417	Esox_lucius
ENSPVAG00000001511	PRDM12	99	75.881	ENSELUG00000013674	PRDM12	89	83.333	Esox_lucius
ENSPVAG00000001511	PRDM12	100	98.087	ENSFCAG00000043086	PRDM12	100	98.087	Felis_catus
ENSPVAG00000001511	PRDM12	100	89.071	ENSFALG00000001445	PRDM12	84	93.413	Ficedula_albicollis
ENSPVAG00000001511	PRDM12	99	73.402	ENSFHEG00000007746	-	88	80.236	Fundulus_heteroclitus
ENSPVAG00000001511	PRDM12	99	76.455	ENSFHEG00000003944	prdm12b	92	81.395	Fundulus_heteroclitus
ENSPVAG00000001511	PRDM12	91	82.282	ENSGMOG00000011797	prdm12b	94	82.282	Gadus_morhua
ENSPVAG00000001511	PRDM12	100	89.071	ENSGALG00000003895	PRDM12	94	93.413	Gallus_gallus
ENSPVAG00000001511	PRDM12	100	77.600	ENSGAFG00000010827	prdm12b	90	82.596	Gambusia_affinis
ENSPVAG00000001511	PRDM12	100	78.133	ENSGACG00000016713	prdm12b	91	83.432	Gasterosteus_aculeatus
ENSPVAG00000001511	PRDM12	100	89.071	ENSGAGG00000014083	PRDM12	94	93.413	Gopherus_agassizii
ENSPVAG00000001511	PRDM12	100	97.814	ENSGGOG00000010568	PRDM12	100	97.814	Gorilla_gorilla
ENSPVAG00000001511	PRDM12	89	81.579	ENSHBUG00000022537	-	80	81.579	Haplochromis_burtoni
ENSPVAG00000001511	PRDM12	99	76.253	ENSHBUG00000022878	prdm12b	93	80.403	Haplochromis_burtoni
ENSPVAG00000001511	PRDM12	100	96.175	ENSHGLG00000013939	PRDM12	100	96.175	Heterocephalus_glaber_female
ENSPVAG00000001511	PRDM12	99	72.581	ENSHCOG00000021167	-	95	76.176	Hippocampus_comes
ENSPVAG00000001511	PRDM12	89	81.287	ENSHCOG00000003663	prdm12b	89	80.516	Hippocampus_comes
ENSPVAG00000001511	PRDM12	99	75.610	ENSIPUG00000019544	PRDM12	90	82.317	Ictalurus_punctatus
ENSPVAG00000001511	PRDM12	99	81.671	ENSIPUG00000017053	prdm12b	91	87.126	Ictalurus_punctatus
ENSPVAG00000001511	PRDM12	99	94.215	ENSSTOG00000005986	PRDM12	87	99.102	Ictidomys_tridecemlineatus
ENSPVAG00000001511	PRDM12	90	98.788	ENSJJAG00000005424	Prdm12	100	98.788	Jaculus_jaculus
ENSPVAG00000001511	PRDM12	99	75.610	ENSKMAG00000021205	-	92	81.651	Kryptolebias_marmoratus
ENSPVAG00000001511	PRDM12	89	78.492	ENSKMAG00000016921	prdm12b	89	78.771	Kryptolebias_marmoratus
ENSPVAG00000001511	PRDM12	99	74.935	ENSLBEG00000007776	-	89	81.602	Labrus_bergylta
ENSPVAG00000001511	PRDM12	99	76.984	ENSLBEG00000017769	prdm12b	88	84.132	Labrus_bergylta
ENSPVAG00000001511	PRDM12	99	86.301	ENSLACG00000017560	PRDM12	94	90.390	Latimeria_chalumnae
ENSPVAG00000001511	PRDM12	99	81.132	ENSLOCG00000005429	prdm12b	93	86.726	Lepisosteus_oculatus
ENSPVAG00000001511	PRDM12	91	97.941	ENSLAFG00000006979	PRDM12	91	97.941	Loxodonta_africana
ENSPVAG00000001511	PRDM12	100	95.652	ENSMFAG00000040322	PRDM12	100	95.652	Macaca_fascicularis
ENSPVAG00000001511	PRDM12	100	97.541	ENSMNEG00000037234	PRDM12	100	97.541	Macaca_nemestrina
ENSPVAG00000001511	PRDM12	99	75.194	ENSMAMG00000013212	prdm12b	90	83.383	Mastacembelus_armatus
ENSPVAG00000001511	PRDM12	89	81.250	ENSMAMG00000018988	-	86	81.250	Mastacembelus_armatus
ENSPVAG00000001511	PRDM12	89	81.579	ENSMZEG00005000415	PRDM12	86	81.579	Maylandia_zebra
ENSPVAG00000001511	PRDM12	95	92.486	ENSMGAG00000005438	PRDM12	94	93.413	Meleagris_gallopavo
ENSPVAG00000001511	PRDM12	100	96.721	ENSMAUG00000013040	Prdm12	100	96.721	Mesocricetus_auratus
ENSPVAG00000001511	PRDM12	100	97.011	ENSMICG00000015480	PRDM12	100	97.011	Microcebus_murinus
ENSPVAG00000001511	PRDM12	99	94.737	ENSMOCG00000021026	Prdm12	93	98.538	Microtus_ochrogaster
ENSPVAG00000001511	PRDM12	100	91.257	ENSMODG00000012108	PRDM12	94	95.509	Monodelphis_domestica
ENSPVAG00000001511	PRDM12	99	66.310	ENSMALG00000021901	prdm12b	88	71.171	Monopterus_albus
ENSPVAG00000001511	PRDM12	100	97.541	MGP_CAROLIEiJ_G0023414	Prdm12	100	97.541	Mus_caroli
ENSPVAG00000001511	PRDM12	100	97.541	ENSMUSG00000079466	Prdm12	100	97.541	Mus_musculus
ENSPVAG00000001511	PRDM12	100	97.541	MGP_PahariEiJ_G0024871	Prdm12	100	97.541	Mus_pahari
ENSPVAG00000001511	PRDM12	100	97.541	MGP_SPRETEiJ_G0024331	Prdm12	100	97.541	Mus_spretus
ENSPVAG00000001511	PRDM12	100	94.536	ENSNGAG00000018480	Prdm12	100	94.536	Nannospalax_galili
ENSPVAG00000001511	PRDM12	99	72.074	ENSNBRG00000024312	-	95	76.608	Neolamprologus_brichardi
ENSPVAG00000001511	PRDM12	99	75.131	ENSNBRG00000006727	prdm12b	93	79.714	Neolamprologus_brichardi
ENSPVAG00000001511	PRDM12	100	81.148	ENSMEUG00000003828	PRDM12	94	84.431	Notamacropus_eugenii
ENSPVAG00000001511	PRDM12	90	98.485	ENSOPRG00000008680	PRDM12	100	98.485	Ochotona_princeps
ENSPVAG00000001511	PRDM12	93	97.953	ENSODEG00000016282	PRDM12	64	97.953	Octodon_degus
ENSPVAG00000001511	PRDM12	63	89.520	ENSOANG00000001043	PRDM12	91	96.954	Ornithorhynchus_anatinus
ENSPVAG00000001511	PRDM12	86	93.610	ENSOCUG00000008241	PRDM12	98	94.754	Oryctolagus_cuniculus
ENSPVAG00000001511	PRDM12	99	72.051	ENSORLG00000017558	-	87	80.352	Oryzias_latipes
ENSPVAG00000001511	PRDM12	100	75.521	ENSORLG00000007114	prdm12b	92	80.692	Oryzias_latipes
ENSPVAG00000001511	PRDM12	90	80.403	ENSORLG00020019565	prdm12b	91	80.403	Oryzias_latipes_hni
ENSPVAG00000001511	PRDM12	99	71.867	ENSORLG00020013167	-	87	80.117	Oryzias_latipes_hni
ENSPVAG00000001511	PRDM12	90	80.403	ENSORLG00015007621	prdm12b	92	80.403	Oryzias_latipes_hsok
ENSPVAG00000001511	PRDM12	99	72.051	ENSORLG00015003435	-	87	80.352	Oryzias_latipes_hsok
ENSPVAG00000001511	PRDM12	100	74.870	ENSOMEG00000004134	prdm12b	91	80.000	Oryzias_melastigma
ENSPVAG00000001511	PRDM12	99	73.454	ENSOMEG00000007762	-	94	78.632	Oryzias_melastigma
ENSPVAG00000001511	PRDM12	91	99.700	ENSOGAG00000007557	PRDM12	100	99.700	Otolemur_garnettii
ENSPVAG00000001511	PRDM12	78	98.258	ENSPPAG00000031506	-	97	98.258	Pan_paniscus
ENSPVAG00000001511	PRDM12	93	90.936	ENSPPRG00000023024	PRDM12	87	90.936	Panthera_pardus
ENSPVAG00000001511	PRDM12	100	98.087	ENSPTRG00000043324	-	100	98.087	Pan_troglodytes
ENSPVAG00000001511	PRDM12	100	98.087	ENSPTRG00000021475	PRDM12	100	98.087	Pan_troglodytes
ENSPVAG00000001511	PRDM12	100	97.541	ENSPANG00000025967	PRDM12	100	97.541	Papio_anubis
ENSPVAG00000001511	PRDM12	93	78.348	ENSPKIG00000004305	PRDM12	94	80.539	Paramormyrops_kingsleyae
ENSPVAG00000001511	PRDM12	99	80.526	ENSPKIG00000007228	prdm12b	94	85.632	Paramormyrops_kingsleyae
ENSPVAG00000001511	PRDM12	100	88.525	ENSPSIG00000006739	PRDM12	94	92.814	Pelodiscus_sinensis
ENSPVAG00000001511	PRDM12	100	76.533	ENSPMGG00000008867	prdm12b	92	82.216	Periophthalmus_magnuspinnatus
ENSPVAG00000001511	PRDM12	99	73.629	ENSPMGG00000002356	-	88	80.655	Periophthalmus_magnuspinnatus
ENSPVAG00000001511	PRDM12	99	92.033	ENSPEMG00000009969	Prdm12	91	98.795	Peromyscus_maniculatus_bairdii
ENSPVAG00000001511	PRDM12	100	91.530	ENSPCIG00000024119	PRDM12	94	95.808	Phascolarctos_cinereus
ENSPVAG00000001511	PRDM12	99	77.719	ENSPFOG00000019841	prdm12b	93	82.216	Poecilia_formosa
ENSPVAG00000001511	PRDM12	90	83.333	ENSPLAG00000016626	prdm12b	90	82.891	Poecilia_latipinna
ENSPVAG00000001511	PRDM12	97	76.902	ENSPMEG00000016698	prdm12b	89	82.371	Poecilia_mexicana
ENSPVAG00000001511	PRDM12	100	77.225	ENSPREG00000015073	prdm12b	89	82.749	Poecilia_reticulata
ENSPVAG00000001511	PRDM12	96	73.077	ENSPREG00000003211	-	90	77.982	Poecilia_reticulata
ENSPVAG00000001511	PRDM12	95	96.866	ENSPPYG00000019694	PRDM12	100	96.866	Pongo_abelii
ENSPVAG00000001511	PRDM12	100	98.634	ENSPCOG00000022255	PRDM12	100	98.634	Propithecus_coquereli
ENSPVAG00000001511	PRDM12	89	81.579	ENSPNYG00000013589	-	86	81.579	Pundamilia_nyererei
ENSPVAG00000001511	PRDM12	99	75.591	ENSPNYG00000009607	prdm12b	93	79.656	Pundamilia_nyererei
ENSPVAG00000001511	PRDM12	99	82.038	ENSPNAG00000024532	prdm12b	91	88.623	Pygocentrus_nattereri
ENSPVAG00000001511	PRDM12	99	74.731	ENSPNAG00000013396	PRDM12	88	80.547	Pygocentrus_nattereri
ENSPVAG00000001511	PRDM12	100	97.541	ENSRNOG00000009218	Prdm12	100	97.541	Rattus_norvegicus
ENSPVAG00000001511	PRDM12	87	99.054	ENSRBIG00000042712	PRDM12	91	96.657	Rhinopithecus_bieti
ENSPVAG00000001511	PRDM12	88	99.065	ENSRROG00000043554	PRDM12	100	99.065	Rhinopithecus_roxellana
ENSPVAG00000001511	PRDM12	100	90.736	ENSSHAG00000015972	PRDM12	94	94.925	Sarcophilus_harrisii
ENSPVAG00000001511	PRDM12	99	74.293	ENSSMAG00000003754	prdm12b	90	80.057	Scophthalmus_maximus
ENSPVAG00000001511	PRDM12	93	81.395	ENSSDUG00000019071	-	90	83.486	Seriola_dumerili
ENSPVAG00000001511	PRDM12	99	75.452	ENSSDUG00000023498	prdm12b	90	81.214	Seriola_dumerili
ENSPVAG00000001511	PRDM12	99	75.781	ENSSLDG00000009557	prdm12b	90	81.924	Seriola_lalandi_dorsalis
ENSPVAG00000001511	PRDM12	99	77.989	ENSSLDG00000013562	-	93	84.356	Seriola_lalandi_dorsalis
ENSPVAG00000001511	PRDM12	100	89.071	ENSSPUG00000013424	PRDM12	94	93.413	Sphenodon_punctatus
ENSPVAG00000001511	PRDM12	99	66.062	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSPVAG00000001511	PRDM12	99	75.718	ENSSPAG00000018824	prdm12b	90	81.871	Stegastes_partitus
ENSPVAG00000001511	PRDM12	100	98.361	ENSSSCG00000005703	PRDM12	100	98.361	Sus_scrofa
ENSPVAG00000001511	PRDM12	99	77.480	ENSTRUG00000018659	prdm12b	92	82.405	Takifugu_rubripes
ENSPVAG00000001511	PRDM12	99	75.067	ENSTRUG00000013239	-	93	81.325	Takifugu_rubripes
ENSPVAG00000001511	PRDM12	99	74.933	ENSTNIG00000005859	-	92	80.606	Tetraodon_nigroviridis
ENSPVAG00000001511	PRDM12	99	78.016	ENSTNIG00000009020	prdm12b	91	83.136	Tetraodon_nigroviridis
ENSPVAG00000001511	PRDM12	95	98.281	ENSUAMG00000009653	PRDM12	97	98.281	Ursus_americanus
ENSPVAG00000001511	PRDM12	91	99.699	ENSVVUG00000027662	PRDM12	79	99.699	Vulpes_vulpes
ENSPVAG00000001511	PRDM12	100	78.016	ENSXCOG00000002836	prdm12b	91	82.596	Xiphophorus_couchianus
ENSPVAG00000001511	PRDM12	99	73.958	ENSXMAG00000028012	-	88	80.294	Xiphophorus_maculatus
ENSPVAG00000001511	PRDM12	99	77.600	ENSXMAG00000005537	prdm12b	91	82.111	Xiphophorus_maculatus