EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000001596 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 20055 bases
Position: chrGeneScaffold_587:483341-503395
Accession: 9348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000001505	zf-C2H2	PF00096.26	5.1e-16	1	2
ENSPVAP00000001505	zf-C2H2	PF00096.26	5.1e-16	2	2
ENSPVAP00000001505	zf-met	PF12874.7	5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000001596	PRDM4-201	2394	-	ENSPVAP00000001505	798 (aa)	-	UPI00018B44FD

Gene Model

Click here to download ENSPVAG00000001596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000001596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000001596	PRDM4	100	96.883	ENSG00000110851	PRDM4	100	97.333	Homo_sapiens
ENSPVAG00000001596	PRDM4	99	97.000	ENSAMEG00000016174	PRDM4	99	97.000	Ailuropoda_melanoleuca
ENSPVAG00000001596	PRDM4	99	86.859	ENSAPLG00000009846	PRDM4	99	86.233	Anas_platyrhynchos
ENSPVAG00000001596	PRDM4	100	96.380	ENSANAG00000024800	PRDM4	100	96.380	Aotus_nancymaae
ENSPVAG00000001596	PRDM4	100	96.883	ENSBTAG00000012999	PRDM4	100	96.883	Bos_taurus
ENSPVAG00000001596	PRDM4	100	96.259	ENSCJAG00000015261	PRDM4	100	96.259	Callithrix_jacchus
ENSPVAG00000001596	PRDM4	100	97.257	ENSCAFG00000001788	PRDM4	100	97.257	Canis_familiaris
ENSPVAG00000001596	PRDM4	100	97.257	ENSCAFG00020004916	PRDM4	100	97.257	Canis_lupus_dingo
ENSPVAG00000001596	PRDM4	100	96.758	ENSCHIG00000019409	PRDM4	100	96.758	Capra_hircus
ENSPVAG00000001596	PRDM4	100	96.758	ENSTSYG00000009248	PRDM4	100	96.758	Carlito_syrichta
ENSPVAG00000001596	PRDM4	99	90.613	ENSCAPG00000013937	PRDM4	99	90.613	Cavia_aperea
ENSPVAG00000001596	PRDM4	99	90.062	ENSCPOG00000022385	PRDM4	100	90.062	Cavia_porcellus
ENSPVAG00000001596	PRDM4	100	96.883	ENSCCAG00000036033	PRDM4	100	96.883	Cebus_capucinus
ENSPVAG00000001596	PRDM4	100	96.509	ENSCATG00000044797	PRDM4	100	96.509	Cercocebus_atys
ENSPVAG00000001596	PRDM4	99	91.925	ENSCLAG00000007545	PRDM4	100	91.294	Chinchilla_lanigera
ENSPVAG00000001596	PRDM4	100	96.758	ENSCSAG00000002896	PRDM4	100	96.758	Chlorocebus_sabaeus
ENSPVAG00000001596	PRDM4	76	96.364	ENSCHOG00000001744	PRDM4	86	96.364	Choloepus_hoffmanni
ENSPVAG00000001596	PRDM4	99	88.346	ENSCPBG00000023187	PRDM4	100	87.719	Chrysemys_picta_bellii
ENSPVAG00000001596	PRDM4	100	96.633	ENSCANG00000021804	PRDM4	100	96.633	Colobus_angolensis_palliatus
ENSPVAG00000001596	PRDM4	99	92.174	ENSCGRG00001015102	-	100	91.801	Cricetulus_griseus_chok1gshd
ENSPVAG00000001596	PRDM4	96	92.139	ENSCGRG00000004044	-	100	91.753	Cricetulus_griseus_crigri
ENSPVAG00000001596	PRDM4	100	95.511	ENSDNOG00000032478	PRDM4	100	95.702	Dasypus_novemcinctus
ENSPVAG00000001596	PRDM4	99	80.451	ENSDORG00000015081	-	100	80.827	Dipodomys_ordii
ENSPVAG00000001596	PRDM4	93	45.000	ENSEBUG00000003775	prdm4	99	45.354	Eptatretus_burgeri
ENSPVAG00000001596	PRDM4	100	97.506	ENSECAG00000015423	PRDM4	100	97.506	Equus_caballus
ENSPVAG00000001596	PRDM4	94	93.351	ENSEEUG00000006569	PRDM4	99	92.952	Erinaceus_europaeus
ENSPVAG00000001596	PRDM4	99	60.510	ENSELUG00000015265	prdm4	99	60.267	Esox_lucius
ENSPVAG00000001596	PRDM4	100	97.506	ENSFCAG00000022478	PRDM4	100	97.506	Felis_catus
ENSPVAG00000001596	PRDM4	99	87.343	ENSFALG00000013342	PRDM4	100	86.842	Ficedula_albicollis
ENSPVAG00000001596	PRDM4	100	86.443	ENSGALG00000012619	PRDM4	100	85.821	Gallus_gallus
ENSPVAG00000001596	PRDM4	99	87.985	ENSGAGG00000002763	PRDM4	95	87.359	Gopherus_agassizii
ENSPVAG00000001596	PRDM4	99	96.754	ENSGGOG00000001244	PRDM4	99	96.754	Gorilla_gorilla
ENSPVAG00000001596	PRDM4	99	93.358	ENSHGLG00000004590	PRDM4	98	92.982	Heterocephalus_glaber_female
ENSPVAG00000001596	PRDM4	99	92.308	ENSHGLG00100007464	PRDM4	100	91.935	Heterocephalus_glaber_male
ENSPVAG00000001596	PRDM4	94	61.140	ENSIPUG00000024162	prdm4	93	61.227	Ictalurus_punctatus
ENSPVAG00000001596	PRDM4	100	96.010	ENSSTOG00000016168	PRDM4	100	95.511	Ictidomys_tridecemlineatus
ENSPVAG00000001596	PRDM4	81	93.280	ENSJJAG00000022448	-	95	93.280	Jaculus_jaculus
ENSPVAG00000001596	PRDM4	99	72.401	ENSLACG00000007452	PRDM4	99	73.020	Latimeria_chalumnae
ENSPVAG00000001596	PRDM4	78	41.689	ENSLOCG00000017092	prdm4	92	41.953	Lepisosteus_oculatus
ENSPVAG00000001596	PRDM4	97	96.451	ENSLAFG00000001483	PRDM4	100	96.451	Loxodonta_africana
ENSPVAG00000001596	PRDM4	100	96.883	ENSMFAG00000041862	PRDM4	100	96.883	Macaca_fascicularis
ENSPVAG00000001596	PRDM4	100	96.883	ENSMMUG00000015550	PRDM4	100	96.883	Macaca_mulatta
ENSPVAG00000001596	PRDM4	100	96.633	ENSMNEG00000032319	PRDM4	100	96.633	Macaca_nemestrina
ENSPVAG00000001596	PRDM4	100	96.758	ENSMLEG00000039607	PRDM4	100	96.758	Mandrillus_leucophaeus
ENSPVAG00000001596	PRDM4	99	79.151	ENSMGAG00000012815	PRDM4	100	78.527	Meleagris_gallopavo
ENSPVAG00000001596	PRDM4	100	95.387	ENSMICG00000007807	PRDM4	100	95.137	Microcebus_murinus
ENSPVAG00000001596	PRDM4	99	92.991	ENSMOCG00000000753	Prdm4	99	92.741	Microtus_ochrogaster
ENSPVAG00000001596	PRDM4	99	94.236	ENSMUSG00000035529	Prdm4	100	93.734	Mus_musculus
ENSPVAG00000001596	PRDM4	99	93.358	MGP_PahariEiJ_G0031398	Prdm4	100	93.147	Mus_pahari
ENSPVAG00000001596	PRDM4	99	94.737	MGP_SPRETEiJ_G0016505	Prdm4	100	94.543	Mus_spretus
ENSPVAG00000001596	PRDM4	99	91.034	ENSMPUG00000012238	PRDM4	99	91.034	Mustela_putorius_furo
ENSPVAG00000001596	PRDM4	99	96.871	ENSMLUG00000000767	PRDM4	99	96.871	Myotis_lucifugus
ENSPVAG00000001596	PRDM4	99	94.987	ENSNGAG00000018627	Prdm4	100	94.737	Nannospalax_galili
ENSPVAG00000001596	PRDM4	100	96.758	ENSNLEG00000006748	PRDM4	100	96.758	Nomascus_leucogenys
ENSPVAG00000001596	PRDM4	89	88.235	ENSMEUG00000004495	PRDM4	89	88.235	Notamacropus_eugenii
ENSPVAG00000001596	PRDM4	88	94.362	ENSOPRG00000010192	PRDM4	89	94.340	Ochotona_princeps
ENSPVAG00000001596	PRDM4	99	89.125	ENSODEG00000014750	PRDM4	99	88.750	Octodon_degus
ENSPVAG00000001596	PRDM4	100	90.025	ENSOANG00000005526	PRDM4	100	90.274	Ornithorhynchus_anatinus
ENSPVAG00000001596	PRDM4	93	96.853	ENSOCUG00000012859	PRDM4	96	96.853	Oryctolagus_cuniculus
ENSPVAG00000001596	PRDM4	99	96.867	ENSOGAG00000011945	PRDM4	100	96.867	Otolemur_garnettii
ENSPVAG00000001596	PRDM4	100	96.509	ENSOARG00000017955	PRDM4	100	96.509	Ovis_aries
ENSPVAG00000001596	PRDM4	100	96.883	ENSPPAG00000038438	PRDM4	100	96.883	Pan_paniscus
ENSPVAG00000001596	PRDM4	100	97.506	ENSPPRG00000004144	PRDM4	100	97.506	Panthera_pardus
ENSPVAG00000001596	PRDM4	100	97.506	ENSPTIG00000005847	PRDM4	100	97.506	Panthera_tigris_altaica
ENSPVAG00000001596	PRDM4	100	96.883	ENSPTRG00000005400	PRDM4	100	96.883	Pan_troglodytes
ENSPVAG00000001596	PRDM4	100	96.883	ENSPANG00000022084	PRDM4	100	96.883	Papio_anubis
ENSPVAG00000001596	PRDM4	99	60.166	ENSPKIG00000000875	prdm4	99	60.166	Paramormyrops_kingsleyae
ENSPVAG00000001596	PRDM4	91	80.193	ENSPSIG00000012066	PRDM4	100	81.262	Pelodiscus_sinensis
ENSPVAG00000001596	PRDM4	99	94.737	ENSPEMG00000014598	Prdm4	100	94.486	Peromyscus_maniculatus_bairdii
ENSPVAG00000001596	PRDM4	100	88.323	ENSPCIG00000009471	PRDM4	100	88.323	Phascolarctos_cinereus
ENSPVAG00000001596	PRDM4	100	96.758	ENSPPYG00000004913	PRDM4	100	96.758	Pongo_abelii
ENSPVAG00000001596	PRDM4	83	95.833	ENSPCAG00000009987	PRDM4	83	95.833	Procavia_capensis
ENSPVAG00000001596	PRDM4	100	95.387	ENSPCOG00000021060	PRDM4	100	95.137	Propithecus_coquereli
ENSPVAG00000001596	PRDM4	99	94.110	ENSRNOG00000004962	Prdm4	100	94.110	Rattus_norvegicus
ENSPVAG00000001596	PRDM4	100	96.633	ENSRBIG00000035488	PRDM4	100	96.633	Rhinopithecus_bieti
ENSPVAG00000001596	PRDM4	100	96.758	ENSRROG00000012779	PRDM4	100	96.758	Rhinopithecus_roxellana
ENSPVAG00000001596	PRDM4	100	96.758	ENSSBOG00000000403	PRDM4	100	96.758	Saimiri_boliviensis_boliviensis
ENSPVAG00000001596	PRDM4	99	63.424	ENSSFOG00015023358	prdm4	99	63.547	Scleropages_formosus
ENSPVAG00000001596	PRDM4	100	97.007	ENSSSCG00000000160	PRDM4	100	97.007	Sus_scrofa
ENSPVAG00000001596	PRDM4	99	87.484	ENSTGUG00000010962	-	99	86.984	Taeniopygia_guttata
ENSPVAG00000001596	PRDM4	73	89.420	ENSTBEG00000001732	PRDM4	84	89.420	Tupaia_belangeri
ENSPVAG00000001596	PRDM4	100	96.758	ENSTTRG00000011056	PRDM4	100	96.758	Tursiops_truncatus
ENSPVAG00000001596	PRDM4	100	97.382	ENSUAMG00000022796	PRDM4	100	97.382	Ursus_americanus
ENSPVAG00000001596	PRDM4	100	97.382	ENSUMAG00000017231	PRDM4	100	97.382	Ursus_maritimus
ENSPVAG00000001596	PRDM4	99	97.368	ENSVPAG00000002215	PRDM4	100	97.368	Vicugna_pacos
ENSPVAG00000001596	PRDM4	100	97.257	ENSVVUG00000023397	PRDM4	100	97.257	Vulpes_vulpes