EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000001749 (Gene tree)
Gene ID: -
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 17077 bases
Position: chrGeneScaffold_3465:225743-242819
Accession: 105308345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000001652	zf-C2H2	PF00096.26	1.3e-26	1	5
ENSPVAP00000001652	zf-C2H2	PF00096.26	1.3e-26	2	5
ENSPVAP00000001652	zf-C2H2	PF00096.26	1.3e-26	3	5
ENSPVAP00000001652	zf-C2H2	PF00096.26	1.3e-26	4	5
ENSPVAP00000001652	zf-C2H2	PF00096.26	1.3e-26	5	5
ENSPVAP00000001652	zf-met	PF12874.7	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000001749	PATZ1-201	2064	-	ENSPVAP00000001652	687 (aa)	XP_011382578	UPI00018B4793

Gene Model

Click here to download ENSPVAG00000001749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000001749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000001749	PATZ1	57	37.398	ENSPVAG00000012830	-	65	37.398
ENSPVAG00000001749	PATZ1	55	32.773	ENSPVAG00000000361	-	87	32.773
ENSPVAG00000001749	PATZ1	55	36.416	ENSPVAG00000015576	ZNF234	78	36.416
ENSPVAG00000001749	PATZ1	53	32.069	ENSPVAG00000010053	ZFP69B	64	32.069
ENSPVAG00000001749	PATZ1	53	34.132	ENSPVAG00000009430	-	50	30.622
ENSPVAG00000001749	PATZ1	53	30.622	ENSPVAG00000009433	-	70	30.622
ENSPVAG00000001749	PATZ1	54	36.527	ENSPVAG00000012309	PRDM5	72	36.527
ENSPVAG00000001749	PATZ1	73	36.232	ENSPVAG00000012683	ZBTB14	57	38.889
ENSPVAG00000001749	PATZ1	52	33.333	ENSPVAG00000000908	ZNF550	54	39.091
ENSPVAG00000001749	PATZ1	55	31.707	ENSPVAG00000015563	-	86	32.520
ENSPVAG00000001749	PATZ1	70	40.741	ENSPVAG00000006563	ZBTB24	69	40.741
ENSPVAG00000001749	PATZ1	56	33.906	ENSPVAG00000002257	-	69	33.906
ENSPVAG00000001749	PATZ1	53	32.692	ENSPVAG00000004392	ZNF235	64	32.692
ENSPVAG00000001749	PATZ1	52	31.683	ENSPVAG00000005467	ZNF81	64	31.683
ENSPVAG00000001749	PATZ1	53	35.652	ENSPVAG00000001094	-	89	35.652
ENSPVAG00000001749	PATZ1	52	33.333	ENSPVAG00000004394	ZNF112	55	32.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000001749	PATZ1	100	99.418	ENSG00000100105	PATZ1	100	99.418	Homo_sapiens
ENSPVAG00000001749	PATZ1	100	53.591	ENSAPOG00000018447	patz1	100	53.867	Acanthochromis_polyacanthus
ENSPVAG00000001749	PATZ1	100	99.709	ENSAMEG00000007074	PATZ1	100	99.709	Ailuropoda_melanoleuca
ENSPVAG00000001749	PATZ1	100	58.807	ENSACIG00000016779	patz1	100	58.606	Amphilophus_citrinellus
ENSPVAG00000001749	PATZ1	100	57.563	ENSAPEG00000013354	patz1	100	57.703	Amphiprion_percula
ENSPVAG00000001749	PATZ1	100	61.131	ENSATEG00000011260	patz1	100	58.156	Anabas_testudineus
ENSPVAG00000001749	PATZ1	85	91.952	ENSAPLG00000003934	PATZ1	99	90.925	Anas_platyrhynchos
ENSPVAG00000001749	PATZ1	100	99.418	ENSANAG00000029603	PATZ1	100	99.418	Aotus_nancymaae
ENSPVAG00000001749	PATZ1	97	62.524	ENSAMXG00000002273	patz1	98	62.147	Astyanax_mexicanus
ENSPVAG00000001749	PATZ1	100	99.709	ENSBTAG00000005478	PATZ1	100	99.709	Bos_taurus
ENSPVAG00000001749	PATZ1	100	99.418	ENSCJAG00000010978	PATZ1	100	99.418	Callithrix_jacchus
ENSPVAG00000001749	PATZ1	100	99.854	ENSCAFG00000013087	PATZ1	100	99.854	Canis_familiaris
ENSPVAG00000001749	PATZ1	100	99.272	ENSCHIG00000020203	PATZ1	100	99.272	Capra_hircus
ENSPVAG00000001749	PATZ1	100	99.418	ENSTSYG00000033183	PATZ1	100	99.418	Carlito_syrichta
ENSPVAG00000001749	PATZ1	100	99.418	ENSCCAG00000028772	PATZ1	100	99.418	Cebus_capucinus
ENSPVAG00000001749	PATZ1	100	99.418	ENSCATG00000006101	PATZ1	100	99.418	Cercocebus_atys
ENSPVAG00000001749	PATZ1	100	89.130	ENSCPBG00000011277	PATZ1	100	88.551	Chrysemys_picta_bellii
ENSPVAG00000001749	PATZ1	100	99.418	ENSCANG00000024972	PATZ1	100	99.418	Colobus_angolensis_palliatus
ENSPVAG00000001749	PATZ1	100	96.943	ENSCGRG00001004071	Patz1	100	96.943	Cricetulus_griseus_chok1gshd
ENSPVAG00000001749	PATZ1	93	97.667	ENSCGRG00000004814	Patz1	100	97.667	Cricetulus_griseus_crigri
ENSPVAG00000001749	PATZ1	100	54.965	ENSCSEG00000001385	patz1	100	55.000	Cynoglossus_semilaevis
ENSPVAG00000001749	PATZ1	100	58.509	ENSCVAG00000007684	patz1	100	58.310	Cyprinodon_variegatus
ENSPVAG00000001749	PATZ1	97	55.714	ENSDARG00000076584	patz1	98	55.286	Danio_rerio
ENSPVAG00000001749	PATZ1	90	99.192	ENSDNOG00000003183	PATZ1	100	99.192	Dasypus_novemcinctus
ENSPVAG00000001749	PATZ1	100	99.563	ENSDORG00000023834	Patz1	100	99.563	Dipodomys_ordii
ENSPVAG00000001749	PATZ1	100	99.418	ENSECAG00000025030	PATZ1	100	99.418	Equus_caballus
ENSPVAG00000001749	PATZ1	100	60.481	ENSELUG00000002333	patz1	100	60.139	Esox_lucius
ENSPVAG00000001749	PATZ1	100	99.854	ENSFCAG00000030253	PATZ1	100	99.854	Felis_catus
ENSPVAG00000001749	PATZ1	86	92.034	ENSFALG00000007450	PATZ1	99	91.141	Ficedula_albicollis
ENSPVAG00000001749	PATZ1	96	95.023	ENSFDAG00000005614	PATZ1	100	94.118	Fukomys_damarensis
ENSPVAG00000001749	PATZ1	100	57.003	ENSFHEG00000014755	patz1	100	57.003	Fundulus_heteroclitus
ENSPVAG00000001749	PATZ1	98	55.230	ENSGMOG00000001062	patz1	98	54.848	Gadus_morhua
ENSPVAG00000001749	PATZ1	100	88.777	ENSGALG00000006934	PATZ1	100	88.201	Gallus_gallus
ENSPVAG00000001749	PATZ1	100	54.219	ENSGAFG00000010053	patz1	100	54.357	Gambusia_affinis
ENSPVAG00000001749	PATZ1	85	92.110	ENSGAGG00000003214	PATZ1	100	91.081	Gopherus_agassizii
ENSPVAG00000001749	PATZ1	100	99.563	ENSGGOG00000017171	PATZ1	100	99.563	Gorilla_gorilla
ENSPVAG00000001749	PATZ1	100	54.596	ENSHCOG00000017644	patz1	93	54.457	Hippocampus_comes
ENSPVAG00000001749	PATZ1	97	54.184	ENSIPUG00000017653	patz1	97	59.630	Ictalurus_punctatus
ENSPVAG00000001749	PATZ1	100	99.418	ENSSTOG00000020707	PATZ1	100	99.418	Ictidomys_tridecemlineatus
ENSPVAG00000001749	PATZ1	100	96.807	ENSJJAG00000015259	Patz1	100	96.807	Jaculus_jaculus
ENSPVAG00000001749	PATZ1	100	57.528	ENSKMAG00000008157	patz1	100	57.486	Kryptolebias_marmoratus
ENSPVAG00000001749	PATZ1	100	98.836	ENSLAFG00000002317	PATZ1	100	98.836	Loxodonta_africana
ENSPVAG00000001749	PATZ1	100	99.272	ENSMFAG00000040968	PATZ1	100	99.272	Macaca_fascicularis
ENSPVAG00000001749	PATZ1	100	99.272	ENSMNEG00000037588	PATZ1	100	99.272	Macaca_nemestrina
ENSPVAG00000001749	PATZ1	100	99.418	ENSMLEG00000030938	PATZ1	100	99.418	Mandrillus_leucophaeus
ENSPVAG00000001749	PATZ1	100	56.735	ENSMAMG00000023652	patz1	100	56.871	Mastacembelus_armatus
ENSPVAG00000001749	PATZ1	85	88.205	ENSMGAG00000008439	PATZ1	100	87.179	Meleagris_gallopavo
ENSPVAG00000001749	PATZ1	100	98.690	ENSMAUG00000004129	Patz1	100	98.690	Mesocricetus_auratus
ENSPVAG00000001749	PATZ1	100	99.418	ENSMICG00000005430	PATZ1	100	99.418	Microcebus_murinus
ENSPVAG00000001749	PATZ1	100	98.544	ENSMOCG00000014488	Patz1	100	98.544	Microtus_ochrogaster
ENSPVAG00000001749	PATZ1	81	54.690	ENSMMOG00000021679	patz1	100	54.513	Mola_mola
ENSPVAG00000001749	PATZ1	100	57.143	ENSMALG00000021172	patz1	100	56.719	Monopterus_albus
ENSPVAG00000001749	PATZ1	100	98.544	MGP_CAROLIEiJ_G0016007	Patz1	100	98.544	Mus_caroli
ENSPVAG00000001749	PATZ1	100	98.690	ENSMUSG00000020453	Patz1	100	98.690	Mus_musculus
ENSPVAG00000001749	PATZ1	100	98.690	MGP_PahariEiJ_G0016884	Patz1	100	98.690	Mus_pahari
ENSPVAG00000001749	PATZ1	100	98.690	MGP_SPRETEiJ_G0016846	Patz1	100	98.690	Mus_spretus
ENSPVAG00000001749	PATZ1	100	99.563	ENSMLUG00000009942	PATZ1	100	99.563	Myotis_lucifugus
ENSPVAG00000001749	PATZ1	100	98.981	ENSNGAG00000010268	Patz1	100	98.981	Nannospalax_galili
ENSPVAG00000001749	PATZ1	100	58.708	ENSNBRG00000016032	patz1	100	58.509	Neolamprologus_brichardi
ENSPVAG00000001749	PATZ1	68	94.194	ENSMEUG00000016293	PATZ1	99	94.181	Notamacropus_eugenii
ENSPVAG00000001749	PATZ1	100	98.690	ENSODEG00000003589	PATZ1	100	98.690	Octodon_degus
ENSPVAG00000001749	PATZ1	100	55.234	ENSONIG00000004248	patz1	100	55.034	Oreochromis_niloticus
ENSPVAG00000001749	PATZ1	100	93.469	ENSOANG00000014654	PATZ1	100	93.759	Ornithorhynchus_anatinus
ENSPVAG00000001749	PATZ1	100	56.599	ENSORLG00020010937	patz1	100	56.463	Oryzias_latipes_hni
ENSPVAG00000001749	PATZ1	100	56.676	ENSORLG00015007396	patz1	100	56.540	Oryzias_latipes_hsok
ENSPVAG00000001749	PATZ1	100	53.825	ENSOMEG00000006636	patz1	100	53.825	Oryzias_melastigma
ENSPVAG00000001749	PATZ1	100	99.563	ENSOGAG00000027905	PATZ1	100	99.563	Otolemur_garnettii
ENSPVAG00000001749	PATZ1	100	99.563	ENSPPAG00000033227	PATZ1	100	99.563	Pan_paniscus
ENSPVAG00000001749	PATZ1	100	99.854	ENSPPRG00000001573	PATZ1	100	99.854	Panthera_pardus
ENSPVAG00000001749	PATZ1	86	100.000	ENSPTIG00000007937	PATZ1	91	100.000	Panthera_tigris_altaica
ENSPVAG00000001749	PATZ1	100	99.563	ENSPTRG00000014268	PATZ1	100	99.563	Pan_troglodytes
ENSPVAG00000001749	PATZ1	100	99.418	ENSPANG00000006821	PATZ1	100	99.418	Papio_anubis
ENSPVAG00000001749	PATZ1	100	61.938	ENSPKIG00000019584	patz1	100	61.657	Paramormyrops_kingsleyae
ENSPVAG00000001749	PATZ1	58	95.960	ENSPSIG00000011562	-	100	95.960	Pelodiscus_sinensis
ENSPVAG00000001749	PATZ1	60	83.535	ENSPSIG00000016553	-	91	82.809	Pelodiscus_sinensis
ENSPVAG00000001749	PATZ1	100	56.882	ENSPMGG00000010196	patz1	100	56.882	Periophthalmus_magnuspinnatus
ENSPVAG00000001749	PATZ1	100	98.544	ENSPEMG00000005321	Patz1	100	98.544	Peromyscus_maniculatus_bairdii
ENSPVAG00000001749	PATZ1	100	54.006	ENSPLAG00000010425	patz1	100	57.072	Poecilia_latipinna
ENSPVAG00000001749	PATZ1	100	54.080	ENSPMEG00000000255	patz1	100	54.219	Poecilia_mexicana
ENSPVAG00000001749	PATZ1	100	56.906	ENSPREG00000002440	patz1	100	57.044	Poecilia_reticulata
ENSPVAG00000001749	PATZ1	100	99.272	ENSPPYG00000011732	PATZ1	100	99.272	Pongo_abelii
ENSPVAG00000001749	PATZ1	100	99.272	ENSPCOG00000019729	PATZ1	100	99.272	Propithecus_coquereli
ENSPVAG00000001749	PATZ1	100	59.244	ENSPNYG00000013542	patz1	100	59.046	Pundamilia_nyererei
ENSPVAG00000001749	PATZ1	84	60.292	ENSPNAG00000017222	patz1	99	58.599	Pygocentrus_nattereri
ENSPVAG00000001749	PATZ1	100	99.418	ENSRBIG00000044231	PATZ1	100	99.418	Rhinopithecus_bieti
ENSPVAG00000001749	PATZ1	100	99.418	ENSRROG00000037155	PATZ1	100	99.418	Rhinopithecus_roxellana
ENSPVAG00000001749	PATZ1	100	99.418	ENSSBOG00000003894	PATZ1	100	99.418	Saimiri_boliviensis_boliviensis
ENSPVAG00000001749	PATZ1	73	80.788	ENSSFOG00015013244	patz1	78	80.788	Scleropages_formosus
ENSPVAG00000001749	PATZ1	100	87.055	ENSSPUG00000015298	PATZ1	100	86.060	Sphenodon_punctatus
ENSPVAG00000001749	PATZ1	85	99.485	ENSSSCG00000010027	PATZ1	100	99.485	Sus_scrofa
ENSPVAG00000001749	PATZ1	100	58.069	ENSTRUG00000015366	patz1	100	57.793	Takifugu_rubripes
ENSPVAG00000001749	PATZ1	100	99.709	ENSTTRG00000010279	PATZ1	100	99.709	Tursiops_truncatus
ENSPVAG00000001749	PATZ1	100	93.159	ENSUAMG00000015014	PATZ1	100	93.159	Ursus_americanus
ENSPVAG00000001749	PATZ1	100	73.188	ENSXETG00000004190	patz1	100	72.464	Xenopus_tropicalis
ENSPVAG00000001749	PATZ1	100	54.357	ENSXMAG00000015531	patz1	100	54.495	Xiphophorus_maculatus