EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000002008 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 42106 bases
Position: chrGeneScaffold_400:56637-98742
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000001896	Ago_hook	PF10427.9	6.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000002007	TNRC6C-201	5190	-	ENSPVAP00000001896	1730 (aa)	-	UPI00018B2C0D

Gene Model

Click here to download ENSPVAG00000002008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000002008's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000002008	TNRC6C	82	44.330	ENSPVAG00000004975	TNRC6B	51	44.330
ENSPVAG00000002008	TNRC6C	88	37.310	ENSPVAG00000012066	TNRC6A	60	41.995

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000002008	TNRC6C	95	88.983	ENSG00000078687	TNRC6C	100	87.931	Homo_sapiens
ENSPVAG00000002008	TNRC6C	73	65.289	ENSAPOG00000019749	tnrc6c1	68	65.289	Acanthochromis_polyacanthus
ENSPVAG00000002008	TNRC6C	95	95.763	ENSAMEG00000013756	TNRC6C	95	95.763	Ailuropoda_melanoleuca
ENSPVAG00000002008	TNRC6C	90	66.102	ENSACIG00000008075	tnrc6c1	86	66.102	Amphilophus_citrinellus
ENSPVAG00000002008	TNRC6C	70	68.029	ENSAOCG00000023968	tnrc6c1	70	62.308	Amphiprion_ocellaris
ENSPVAG00000002008	TNRC6C	73	63.333	ENSAPEG00000009020	tnrc6c1	69	63.333	Amphiprion_percula
ENSPVAG00000002008	TNRC6C	96	88.136	ENSAPLG00000005456	TNRC6C	89	88.136	Anas_platyrhynchos
ENSPVAG00000002008	TNRC6C	95	87.288	ENSACAG00000016198	TNRC6C	87	87.288	Anolis_carolinensis
ENSPVAG00000002008	TNRC6C	95	88.136	ENSANAG00000021554	TNRC6C	96	88.392	Aotus_nancymaae
ENSPVAG00000002008	TNRC6C	95	66.102	ENSACLG00000000424	tnrc6c1	87	66.949	Astatotilapia_calliptera
ENSPVAG00000002008	TNRC6C	95	92.373	ENSBTAG00000018658	TNRC6C	96	92.373	Bos_taurus
ENSPVAG00000002008	TNRC6C	95	88.136	ENSCJAG00000019431	TNRC6C	96	88.192	Callithrix_jacchus
ENSPVAG00000002008	TNRC6C	95	94.915	ENSCAFG00000005224	TNRC6C	95	94.915	Canis_familiaris
ENSPVAG00000002008	TNRC6C	95	94.915	ENSCAFG00020006661	TNRC6C	96	94.915	Canis_lupus_dingo
ENSPVAG00000002008	TNRC6C	95	92.373	ENSCHIG00000026004	TNRC6C	96	92.373	Capra_hircus
ENSPVAG00000002008	TNRC6C	93	91.525	ENSTSYG00000005403	TNRC6C	96	91.525	Carlito_syrichta
ENSPVAG00000002008	TNRC6C	96	85.593	ENSCAPG00000007307	TNRC6C	88	85.593	Cavia_aperea
ENSPVAG00000002008	TNRC6C	95	86.585	ENSCPOG00000000467	TNRC6C	96	86.361	Cavia_porcellus
ENSPVAG00000002008	TNRC6C	95	88.983	ENSCCAG00000030524	TNRC6C	96	88.983	Cebus_capucinus
ENSPVAG00000002008	TNRC6C	95	88.983	ENSCATG00000033135	TNRC6C	96	88.983	Cercocebus_atys
ENSPVAG00000002008	TNRC6C	95	88.399	ENSCLAG00000011139	TNRC6C	88	88.243	Chinchilla_lanigera
ENSPVAG00000002008	TNRC6C	95	88.983	ENSCSAG00000005167	TNRC6C	88	88.983	Chlorocebus_sabaeus
ENSPVAG00000002008	TNRC6C	76	89.744	ENSCHOG00000000088	TNRC6C	75	89.583	Choloepus_hoffmanni
ENSPVAG00000002008	TNRC6C	95	88.136	ENSCPBG00000027960	TNRC6C	96	88.136	Chrysemys_picta_bellii
ENSPVAG00000002008	TNRC6C	95	88.983	ENSCANG00000041771	TNRC6C	96	88.983	Colobus_angolensis_palliatus
ENSPVAG00000002008	TNRC6C	95	88.136	ENSCGRG00001022686	Tnrc6c	96	88.136	Cricetulus_griseus_chok1gshd
ENSPVAG00000002008	TNRC6C	95	88.136	ENSCGRG00000018041	Tnrc6c	96	88.136	Cricetulus_griseus_crigri
ENSPVAG00000002008	TNRC6C	73	60.000	ENSCSEG00000012744	tnrc6c1	67	60.000	Cynoglossus_semilaevis
ENSPVAG00000002008	TNRC6C	95	71.429	ENSDARG00000076847	tnrc6c1	76	72.269	Danio_rerio
ENSPVAG00000002008	TNRC6C	95	92.373	ENSDNOG00000003247	TNRC6C	90	92.373	Dasypus_novemcinctus
ENSPVAG00000002008	TNRC6C	95	88.983	ENSDORG00000004558	Tnrc6c	96	88.983	Dipodomys_ordii
ENSPVAG00000002008	TNRC6C	85	88.983	ENSETEG00000005527	TNRC6C	85	88.983	Echinops_telfairi
ENSPVAG00000002008	TNRC6C	93	95.763	ENSEASG00005004799	TNRC6C	96	95.763	Equus_asinus_asinus
ENSPVAG00000002008	TNRC6C	95	95.763	ENSECAG00000012486	TNRC6C	89	95.763	Equus_caballus
ENSPVAG00000002008	TNRC6C	92	91.638	ENSEEUG00000010008	TNRC6C	92	91.685	Erinaceus_europaeus
ENSPVAG00000002008	TNRC6C	95	92.373	ENSFCAG00000028358	TNRC6C	96	92.373	Felis_catus
ENSPVAG00000002008	TNRC6C	93	88.983	ENSFALG00000000848	TNRC6C	96	88.983	Ficedula_albicollis
ENSPVAG00000002008	TNRC6C	95	88.529	ENSFDAG00000010368	TNRC6C	96	87.589	Fukomys_damarensis
ENSPVAG00000002008	TNRC6C	95	60.769	ENSFHEG00000002936	tnrc6c1	70	61.538	Fundulus_heteroclitus
ENSPVAG00000002008	TNRC6C	95	87.288	ENSGALG00000001725	TNRC6C	96	87.288	Gallus_gallus
ENSPVAG00000002008	TNRC6C	95	60.150	ENSGAFG00000019019	tnrc6c1	74	60.150	Gambusia_affinis
ENSPVAG00000002008	TNRC6C	73	59.524	ENSGACG00000012320	tnrc6c1	65	61.111	Gasterosteus_aculeatus
ENSPVAG00000002008	TNRC6C	95	88.136	ENSGAGG00000022043	TNRC6C	94	88.136	Gopherus_agassizii
ENSPVAG00000002008	TNRC6C	96	88.983	ENSGGOG00000011304	TNRC6C	96	88.983	Gorilla_gorilla
ENSPVAG00000002008	TNRC6C	95	66.102	ENSHBUG00000010846	tnrc6c1	87	66.949	Haplochromis_burtoni
ENSPVAG00000002008	TNRC6C	95	88.723	ENSHGLG00000004809	TNRC6C	88	88.566	Heterocephalus_glaber_female
ENSPVAG00000002008	TNRC6C	95	88.266	ENSHGLG00100012597	TNRC6C	88	88.111	Heterocephalus_glaber_male
ENSPVAG00000002008	TNRC6C	95	66.142	ENSIPUG00000000818	tnrc6c1	67	67.717	Ictalurus_punctatus
ENSPVAG00000002008	TNRC6C	95	88.136	ENSSTOG00000009101	TNRC6C	96	88.136	Ictidomys_tridecemlineatus
ENSPVAG00000002008	TNRC6C	95	86.111	ENSJJAG00000017055	Tnrc6c	88	86.027	Jaculus_jaculus
ENSPVAG00000002008	TNRC6C	95	66.949	ENSKMAG00000021023	tnrc6c1	92	66.949	Kryptolebias_marmoratus
ENSPVAG00000002008	TNRC6C	94	79.661	ENSLACG00000015283	TNRC6C	93	79.661	Latimeria_chalumnae
ENSPVAG00000002008	TNRC6C	95	73.950	ENSLOCG00000013377	tnrc6c1	88	73.950	Lepisosteus_oculatus
ENSPVAG00000002008	TNRC6C	95	92.373	ENSLAFG00000011122	TNRC6C	94	92.373	Loxodonta_africana
ENSPVAG00000002008	TNRC6C	95	88.983	ENSMFAG00000043943	TNRC6C	96	88.983	Macaca_fascicularis
ENSPVAG00000002008	TNRC6C	95	88.983	ENSMMUG00000011924	TNRC6C	96	88.983	Macaca_mulatta
ENSPVAG00000002008	TNRC6C	95	88.983	ENSMNEG00000030405	TNRC6C	96	88.983	Macaca_nemestrina
ENSPVAG00000002008	TNRC6C	95	88.983	ENSMLEG00000033436	TNRC6C	96	88.983	Mandrillus_leucophaeus
ENSPVAG00000002008	TNRC6C	73	64.167	ENSMAMG00000023613	tnrc6c1	83	61.364	Mastacembelus_armatus
ENSPVAG00000002008	TNRC6C	95	66.102	ENSMZEG00005010920	tnrc6c1	87	66.949	Maylandia_zebra
ENSPVAG00000002008	TNRC6C	96	76.256	ENSMGAG00000003906	TNRC6C	89	76.005	Meleagris_gallopavo
ENSPVAG00000002008	TNRC6C	93	89.831	ENSMAUG00000021618	Tnrc6c	96	89.831	Mesocricetus_auratus
ENSPVAG00000002008	TNRC6C	93	89.752	ENSMICG00000003952	TNRC6C	96	89.453	Microcebus_murinus
ENSPVAG00000002008	TNRC6C	95	89.831	ENSMOCG00000015879	Tnrc6c	96	89.831	Microtus_ochrogaster
ENSPVAG00000002008	TNRC6C	72	60.000	ENSMMOG00000005203	tnrc6c1	73	59.375	Mola_mola
ENSPVAG00000002008	TNRC6C	95	85.593	ENSMODG00000001785	TNRC6C	88	85.593	Monodelphis_domestica
ENSPVAG00000002008	TNRC6C	95	89.831	MGP_CAROLIEiJ_G0017465	Tnrc6c	96	89.831	Mus_caroli
ENSPVAG00000002008	TNRC6C	95	88.983	ENSMUSG00000025571	Tnrc6c	96	88.983	Mus_musculus
ENSPVAG00000002008	TNRC6C	95	89.831	MGP_PahariEiJ_G0018593	Tnrc6c	96	89.831	Mus_pahari
ENSPVAG00000002008	TNRC6C	95	89.831	MGP_SPRETEiJ_G0018309	Tnrc6c	96	89.831	Mus_spretus
ENSPVAG00000002008	TNRC6C	95	95.763	ENSMPUG00000013348	TNRC6C	87	95.763	Mustela_putorius_furo
ENSPVAG00000002008	TNRC6C	95	94.068	ENSMLUG00000014431	TNRC6C	87	94.068	Myotis_lucifugus
ENSPVAG00000002008	TNRC6C	95	88.136	ENSNGAG00000012203	Tnrc6c	88	88.136	Nannospalax_galili
ENSPVAG00000002008	TNRC6C	95	66.102	ENSNBRG00000005344	tnrc6c1	87	66.949	Neolamprologus_brichardi
ENSPVAG00000002008	TNRC6C	95	88.136	ENSNLEG00000000047	TNRC6C	88	88.136	Nomascus_leucogenys
ENSPVAG00000002008	TNRC6C	93	77.929	ENSMEUG00000005104	TNRC6C	96	77.677	Notamacropus_eugenii
ENSPVAG00000002008	TNRC6C	93	88.983	ENSODEG00000012499	TNRC6C	96	88.983	Octodon_degus
ENSPVAG00000002008	TNRC6C	87	60.448	ENSONIG00000002210	tnrc6c1	87	59.848	Oreochromis_niloticus
ENSPVAG00000002008	TNRC6C	95	84.746	ENSOANG00000009758	-	63	84.746	Ornithorhynchus_anatinus
ENSPVAG00000002008	TNRC6C	84	79.507	ENSOCUG00000006122	TNRC6C	86	79.416	Oryctolagus_cuniculus
ENSPVAG00000002008	TNRC6C	95	61.364	ENSORLG00000009837	tnrc6c1	70	71.930	Oryzias_latipes
ENSPVAG00000002008	TNRC6C	95	60.606	ENSORLG00020016510	tnrc6c1	75	60.606	Oryzias_latipes_hni
ENSPVAG00000002008	TNRC6C	81	42.091	ENSORLG00015000171	tnrc6c1	71	48.374	Oryzias_latipes_hsok
ENSPVAG00000002008	TNRC6C	95	60.150	ENSOMEG00000000357	tnrc6c1	70	61.194	Oryzias_melastigma
ENSPVAG00000002008	TNRC6C	93	88.983	ENSOGAG00000007197	TNRC6C	96	88.983	Otolemur_garnettii
ENSPVAG00000002008	TNRC6C	91	91.111	ENSOARG00000006041	TNRC6C	86	91.111	Ovis_aries
ENSPVAG00000002008	TNRC6C	95	88.983	ENSPPAG00000027160	TNRC6C	96	88.983	Pan_paniscus
ENSPVAG00000002008	TNRC6C	95	92.373	ENSPPRG00000018881	TNRC6C	96	92.373	Panthera_pardus
ENSPVAG00000002008	TNRC6C	86	86.957	ENSPTIG00000008791	TNRC6C	81	86.957	Panthera_tigris_altaica
ENSPVAG00000002008	TNRC6C	95	88.983	ENSPTRG00000009699	TNRC6C	96	88.983	Pan_troglodytes
ENSPVAG00000002008	TNRC6C	95	88.983	ENSPANG00000019994	TNRC6C	96	88.983	Papio_anubis
ENSPVAG00000002008	TNRC6C	89	70.833	ENSPKIG00000005428	tnrc6c1	93	70.833	Paramormyrops_kingsleyae
ENSPVAG00000002008	TNRC6C	95	87.288	ENSPSIG00000018069	TNRC6C	96	87.288	Pelodiscus_sinensis
ENSPVAG00000002008	TNRC6C	67	61.864	ENSPMGG00000022911	tnrc6c1	67	63.559	Periophthalmus_magnuspinnatus
ENSPVAG00000002008	TNRC6C	95	88.983	ENSPEMG00000009785	Tnrc6c	97	88.983	Peromyscus_maniculatus_bairdii
ENSPVAG00000002008	TNRC6C	56	81.725	ENSPCIG00000017421	-	99	81.314	Phascolarctos_cinereus
ENSPVAG00000002008	TNRC6C	95	59.701	ENSPFOG00000012560	tnrc6c1	98	53.021	Poecilia_formosa
ENSPVAG00000002008	TNRC6C	93	66.949	ENSPLAG00000021055	tnrc6c1	93	66.949	Poecilia_latipinna
ENSPVAG00000002008	TNRC6C	95	88.983	ENSPPYG00000008679	TNRC6C	87	88.983	Pongo_abelii
ENSPVAG00000002008	TNRC6C	89	92.952	ENSPCAG00000012510	TNRC6C	90	93.103	Procavia_capensis
ENSPVAG00000002008	TNRC6C	93	89.826	ENSPCOG00000021451	TNRC6C	96	89.593	Propithecus_coquereli
ENSPVAG00000002008	TNRC6C	95	66.102	ENSPNYG00000014477	tnrc6c1	86	66.949	Pundamilia_nyererei
ENSPVAG00000002008	TNRC6C	93	89.831	ENSRNOG00000022395	Tnrc6c	96	89.831	Rattus_norvegicus
ENSPVAG00000002008	TNRC6C	95	88.983	ENSRBIG00000027777	TNRC6C	96	88.983	Rhinopithecus_bieti
ENSPVAG00000002008	TNRC6C	95	88.983	ENSRROG00000042912	TNRC6C	96	88.983	Rhinopithecus_roxellana
ENSPVAG00000002008	TNRC6C	95	88.983	ENSSBOG00000023981	TNRC6C	96	88.983	Saimiri_boliviensis_boliviensis
ENSPVAG00000002008	TNRC6C	71	71.667	ENSSFOG00015006475	tnrc6c1	69	71.667	Scleropages_formosus
ENSPVAG00000002008	TNRC6C	76	54.447	ENSSFOG00015004735	-	82	54.582	Scleropages_formosus
ENSPVAG00000002008	TNRC6C	95	60.769	ENSSMAG00000012761	tnrc6c1	75	62.308	Scophthalmus_maximus
ENSPVAG00000002008	TNRC6C	95	61.538	ENSSDUG00000002366	tnrc6c1	92	61.719	Seriola_dumerili
ENSPVAG00000002008	TNRC6C	87	62.308	ENSSLDG00000025613	tnrc6c1	93	62.500	Seriola_lalandi_dorsalis
ENSPVAG00000002008	TNRC6C	91	95.763	ENSSARG00000006816	TNRC6C	91	95.763	Sorex_araneus
ENSPVAG00000002008	TNRC6C	75	86.441	ENSSPUG00000007341	TNRC6C	86	86.441	Sphenodon_punctatus
ENSPVAG00000002008	TNRC6C	72	58.491	ENSSPAG00000014977	tnrc6c1	68	58.559	Stegastes_partitus
ENSPVAG00000002008	TNRC6C	93	95.763	ENSSSCG00000034373	TNRC6C	96	95.763	Sus_scrofa
ENSPVAG00000002008	TNRC6C	95	88.983	ENSTGUG00000007733	TNRC6C	96	88.983	Taeniopygia_guttata
ENSPVAG00000002008	TNRC6C	72	62.097	ENSTRUG00000011685	tnrc6c1	74	64.286	Takifugu_rubripes
ENSPVAG00000002008	TNRC6C	90	65.833	ENSTNIG00000005273	tnrc6c1	93	65.833	Tetraodon_nigroviridis
ENSPVAG00000002008	TNRC6C	60	88.987	ENSTBEG00000005046	TNRC6C	90	89.224	Tupaia_belangeri
ENSPVAG00000002008	TNRC6C	96	95.000	ENSTTRG00000010828	TNRC6C	96	95.000	Tursiops_truncatus
ENSPVAG00000002008	TNRC6C	95	94.915	ENSUMAG00000013614	TNRC6C	89	94.915	Ursus_maritimus
ENSPVAG00000002008	TNRC6C	50	82.057	ENSVPAG00000006765	-	100	82.400	Vicugna_pacos
ENSPVAG00000002008	TNRC6C	93	95.763	ENSVVUG00000015268	TNRC6C	96	95.763	Vulpes_vulpes
ENSPVAG00000002008	TNRC6C	92	80.508	ENSXETG00000019470	tnrc6c	96	80.508	Xenopus_tropicalis
ENSPVAG00000002008	TNRC6C	95	66.949	ENSXMAG00000025971	tnrc6c1	74	60.150	Xiphophorus_maculatus