EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000002134 (Gene tree)
Gene ID: -
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 24684 bases
Position: chrGeneScaffold_2866:13332-38015
Accession: 17340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000002016	RRM_4	PF10598.9	1.9e-48	1	1
ENSPVAP00000002016	U5_2-snRNA_bdg	PF10597.9	3.9e-74	1	1
ENSPVAP00000002016	PRO8NT	PF08082.11	7.7e-87	1	1
ENSPVAP00000002016	U6-snRNA_bdg	PF10596.9	4.2e-80	1	1
ENSPVAP00000002016	PROCN	PF08083.11	1e-235	1	1
ENSPVAP00000002016	PRP8_domainIV	PF12134.8	2e-130	1	1
ENSPVAP00000002016	PROCT	PF08084.11	9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000002134	PRPF8-201	6987	-	ENSPVAP00000002016	2328 (aa)	-	UPI00018B4681

Gene Model

Click here to download ENSPVAG00000002134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000002134's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000002134	PRPF8	93	100.000	ENSG00000174231	PRPF8	93	100.000	Homo_sapiens
ENSPVAG00000002134	PRPF8	93	98.614	ENSAPOG00000010079	prpf8	93	98.614	Acanthochromis_polyacanthus
ENSPVAG00000002134	PRPF8	93	100.000	ENSAMEG00000007940	PRPF8	93	100.000	Ailuropoda_melanoleuca
ENSPVAG00000002134	PRPF8	93	96.794	ENSACIG00000018280	prpf8	93	96.794	Amphilophus_citrinellus
ENSPVAG00000002134	PRPF8	93	98.614	ENSAOCG00000010725	prpf8	93	98.614	Amphiprion_ocellaris
ENSPVAG00000002134	PRPF8	93	98.614	ENSAPEG00000014397	prpf8	93	98.614	Amphiprion_percula
ENSPVAG00000002134	PRPF8	93	98.004	ENSATEG00000010062	prpf8	93	98.004	Anabas_testudineus
ENSPVAG00000002134	PRPF8	89	99.446	ENSAPLG00000010357	PRPF8	93	99.446	Anas_platyrhynchos
ENSPVAG00000002134	PRPF8	79	97.081	ENSACAG00000014784	PRPF8	96	97.081	Anolis_carolinensis
ENSPVAG00000002134	PRPF8	93	100.000	ENSANAG00000032629	PRPF8	93	100.000	Aotus_nancymaae
ENSPVAG00000002134	PRPF8	93	98.559	ENSACLG00000020858	prpf8	93	98.559	Astatotilapia_calliptera
ENSPVAG00000002134	PRPF8	93	98.503	ENSAMXG00000020291	prpf8	93	98.503	Astyanax_mexicanus
ENSPVAG00000002134	PRPF8	93	100.000	ENSBTAG00000011488	PRPF8	93	100.000	Bos_taurus
ENSPVAG00000002134	PRPF8	92	89.933	WBGene00004187	prp-8	93	89.485	Caenorhabditis_elegans
ENSPVAG00000002134	PRPF8	93	100.000	ENSCJAG00000001911	PRPF8	93	100.000	Callithrix_jacchus
ENSPVAG00000002134	PRPF8	93	100.000	ENSCAFG00000019221	PRPF8	93	100.000	Canis_familiaris
ENSPVAG00000002134	PRPF8	89	100.000	ENSCAFG00020009943	PRPF8	93	100.000	Canis_lupus_dingo
ENSPVAG00000002134	PRPF8	93	100.000	ENSCHIG00000017499	PRPF8	93	100.000	Capra_hircus
ENSPVAG00000002134	PRPF8	93	100.000	ENSTSYG00000014120	PRPF8	93	100.000	Carlito_syrichta
ENSPVAG00000002134	PRPF8	89	100.000	ENSCAPG00000009459	PRPF8	92	100.000	Cavia_aperea
ENSPVAG00000002134	PRPF8	93	100.000	ENSCPOG00000010379	PRPF8	93	100.000	Cavia_porcellus
ENSPVAG00000002134	PRPF8	93	100.000	ENSCCAG00000031983	-	93	100.000	Cebus_capucinus
ENSPVAG00000002134	PRPF8	93	100.000	ENSCATG00000038595	PRPF8	93	100.000	Cercocebus_atys
ENSPVAG00000002134	PRPF8	93	100.000	ENSCLAG00000004388	PRPF8	93	100.000	Chinchilla_lanigera
ENSPVAG00000002134	PRPF8	93	100.000	ENSCSAG00000013929	PRPF8	93	100.000	Chlorocebus_sabaeus
ENSPVAG00000002134	PRPF8	77	100.000	ENSCHOG00000008590	PRPF8	84	100.000	Choloepus_hoffmanni
ENSPVAG00000002134	PRPF8	93	99.390	ENSCPBG00000020409	PRPF8	93	99.390	Chrysemys_picta_bellii
ENSPVAG00000002134	PRPF8	91	93.802	ENSCSAVG00000007825	-	94	93.319	Ciona_savignyi
ENSPVAG00000002134	PRPF8	93	100.000	ENSCANG00000043088	PRPF8	93	100.000	Colobus_angolensis_palliatus
ENSPVAG00000002134	PRPF8	66	98.031	ENSCGRG00000005129	Prpf8	90	98.031	Cricetulus_griseus_crigri
ENSPVAG00000002134	PRPF8	93	98.503	ENSCSEG00000007905	prpf8	93	98.503	Cynoglossus_semilaevis
ENSPVAG00000002134	PRPF8	93	98.503	ENSDARG00000026180	prpf8	93	98.503	Danio_rerio
ENSPVAG00000002134	PRPF8	90	100.000	ENSDNOG00000018471	PRPF8	96	100.000	Dasypus_novemcinctus
ENSPVAG00000002134	PRPF8	77	100.000	ENSDORG00000006185	Prpf8	87	100.000	Dipodomys_ordii
ENSPVAG00000002134	PRPF8	93	93.955	FBgn0033688	Prp8	91	93.955	Drosophila_melanogaster
ENSPVAG00000002134	PRPF8	91	100.000	ENSETEG00000017592	PRPF8	91	100.000	Echinops_telfairi
ENSPVAG00000002134	PRPF8	93	94.623	ENSEBUG00000006548	prpf8	92	94.623	Eptatretus_burgeri
ENSPVAG00000002134	PRPF8	93	100.000	ENSEASG00005009514	PRPF8	94	100.000	Equus_asinus_asinus
ENSPVAG00000002134	PRPF8	90	100.000	ENSECAG00000021318	PRPF8	93	100.000	Equus_caballus
ENSPVAG00000002134	PRPF8	66	100.000	ENSEEUG00000012120	-	67	100.000	Erinaceus_europaeus
ENSPVAG00000002134	PRPF8	90	98.392	ENSELUG00000007120	prpf8	92	98.392	Esox_lucius
ENSPVAG00000002134	PRPF8	93	100.000	ENSFCAG00000006297	PRPF8	93	100.000	Felis_catus
ENSPVAG00000002134	PRPF8	93	99.446	ENSFALG00000006628	PRPF8	93	99.446	Ficedula_albicollis
ENSPVAG00000002134	PRPF8	93	100.000	ENSFDAG00000004711	PRPF8	93	100.000	Fukomys_damarensis
ENSPVAG00000002134	PRPF8	93	98.392	ENSFHEG00000021084	prpf8	93	98.392	Fundulus_heteroclitus
ENSPVAG00000002134	PRPF8	93	96.175	ENSGMOG00000002028	prpf8	93	96.175	Gadus_morhua
ENSPVAG00000002134	PRPF8	93	99.446	ENSGALG00000002943	PRPF8	93	99.446	Gallus_gallus
ENSPVAG00000002134	PRPF8	93	98.559	ENSGAFG00000010337	prpf8	93	98.559	Gambusia_affinis
ENSPVAG00000002134	PRPF8	93	98.448	ENSGACG00000008504	prpf8	93	98.448	Gasterosteus_aculeatus
ENSPVAG00000002134	PRPF8	93	99.390	ENSGAGG00000008350	PRPF8	93	99.390	Gopherus_agassizii
ENSPVAG00000002134	PRPF8	93	100.000	ENSGGOG00000005516	PRPF8	93	100.000	Gorilla_gorilla
ENSPVAG00000002134	PRPF8	93	98.559	ENSHBUG00000016192	prpf8	93	98.559	Haplochromis_burtoni
ENSPVAG00000002134	PRPF8	93	100.000	ENSHGLG00000012029	PRPF8	93	100.000	Heterocephalus_glaber_female
ENSPVAG00000002134	PRPF8	93	100.000	ENSHGLG00100016494	PRPF8	93	100.000	Heterocephalus_glaber_male
ENSPVAG00000002134	PRPF8	93	98.614	ENSHCOG00000016414	prpf8	93	98.614	Hippocampus_comes
ENSPVAG00000002134	PRPF8	93	98.448	ENSIPUG00000023230	prpf8	93	98.448	Ictalurus_punctatus
ENSPVAG00000002134	PRPF8	93	100.000	ENSSTOG00000005128	PRPF8	93	100.000	Ictidomys_tridecemlineatus
ENSPVAG00000002134	PRPF8	93	100.000	ENSJJAG00000021159	Prpf8	93	100.000	Jaculus_jaculus
ENSPVAG00000002134	PRPF8	92	98.559	ENSKMAG00000016118	prpf8	92	98.559	Kryptolebias_marmoratus
ENSPVAG00000002134	PRPF8	93	98.392	ENSLBEG00000026903	prpf8	93	98.392	Labrus_bergylta
ENSPVAG00000002134	PRPF8	90	98.560	ENSLACG00000010479	PRPF8	95	98.560	Latimeria_chalumnae
ENSPVAG00000002134	PRPF8	93	98.504	ENSLOCG00000005409	prpf8	93	98.504	Lepisosteus_oculatus
ENSPVAG00000002134	PRPF8	93	100.000	ENSLAFG00000015445	PRPF8	93	100.000	Loxodonta_africana
ENSPVAG00000002134	PRPF8	93	100.000	ENSMFAG00000039995	PRPF8	93	100.000	Macaca_fascicularis
ENSPVAG00000002134	PRPF8	93	100.000	ENSMMUG00000004820	PRPF8	93	100.000	Macaca_mulatta
ENSPVAG00000002134	PRPF8	93	100.000	ENSMNEG00000035713	PRPF8	93	100.000	Macaca_nemestrina
ENSPVAG00000002134	PRPF8	93	100.000	ENSMLEG00000037937	PRPF8	93	100.000	Mandrillus_leucophaeus
ENSPVAG00000002134	PRPF8	93	98.614	ENSMAMG00000008919	prpf8	93	98.614	Mastacembelus_armatus
ENSPVAG00000002134	PRPF8	93	98.559	ENSMZEG00005015073	prpf8	93	98.559	Maylandia_zebra
ENSPVAG00000002134	PRPF8	93	99.446	ENSMGAG00000004769	PRPF8	93	99.446	Meleagris_gallopavo
ENSPVAG00000002134	PRPF8	93	100.000	ENSMICG00000010320	PRPF8	93	100.000	Microcebus_murinus
ENSPVAG00000002134	PRPF8	93	100.000	ENSMOCG00000016838	Prpf8	93	100.000	Microtus_ochrogaster
ENSPVAG00000002134	PRPF8	93	98.503	ENSMMOG00000011887	prpf8	93	98.503	Mola_mola
ENSPVAG00000002134	PRPF8	93	99.653	ENSMODG00000010480	PRPF8	93	99.653	Monodelphis_domestica
ENSPVAG00000002134	PRPF8	90	97.414	ENSMALG00000003558	prpf8	93	97.414	Monopterus_albus
ENSPVAG00000002134	PRPF8	93	100.000	MGP_CAROLIEiJ_G0016740	Prpf8	93	100.000	Mus_caroli
ENSPVAG00000002134	PRPF8	93	100.000	ENSMUSG00000020850	Prpf8	93	100.000	Mus_musculus
ENSPVAG00000002134	PRPF8	93	100.000	MGP_PahariEiJ_G0017877	Prpf8	93	100.000	Mus_pahari
ENSPVAG00000002134	PRPF8	93	100.000	MGP_SPRETEiJ_G0017583	Prpf8	93	100.000	Mus_spretus
ENSPVAG00000002134	PRPF8	93	100.000	ENSMPUG00000013227	PRPF8	93	100.000	Mustela_putorius_furo
ENSPVAG00000002134	PRPF8	93	100.000	ENSMLUG00000002666	PRPF8	93	100.000	Myotis_lucifugus
ENSPVAG00000002134	PRPF8	93	100.000	ENSNGAG00000005305	Prpf8	93	100.000	Nannospalax_galili
ENSPVAG00000002134	PRPF8	93	98.559	ENSNBRG00000013127	prpf8	93	98.559	Neolamprologus_brichardi
ENSPVAG00000002134	PRPF8	90	100.000	ENSNLEG00000000897	PRPF8	91	100.000	Nomascus_leucogenys
ENSPVAG00000002134	PRPF8	91	100.000	ENSMEUG00000015999	PRPF8	93	100.000	Notamacropus_eugenii
ENSPVAG00000002134	PRPF8	93	99.224	ENSOPRG00000003102	PRPF8	93	99.224	Ochotona_princeps
ENSPVAG00000002134	PRPF8	93	100.000	ENSODEG00000008468	PRPF8	93	100.000	Octodon_degus
ENSPVAG00000002134	PRPF8	93	98.614	ENSONIG00000008153	prpf8	93	98.614	Oreochromis_niloticus
ENSPVAG00000002134	PRPF8	75	100.000	ENSOANG00000004250	PRPF8	89	100.000	Ornithorhynchus_anatinus
ENSPVAG00000002134	PRPF8	93	100.000	ENSOCUG00000000081	PRPF8	93	100.000	Oryctolagus_cuniculus
ENSPVAG00000002134	PRPF8	93	98.503	ENSORLG00000008036	prpf8	93	98.449	Oryzias_latipes
ENSPVAG00000002134	PRPF8	93	98.449	ENSORLG00020021070	prpf8	92	98.449	Oryzias_latipes_hni
ENSPVAG00000002134	PRPF8	93	98.503	ENSORLG00015002340	prpf8	92	98.503	Oryzias_latipes_hsok
ENSPVAG00000002134	PRPF8	93	96.452	ENSOMEG00000016866	prpf8	92	96.452	Oryzias_melastigma
ENSPVAG00000002134	PRPF8	93	100.000	ENSOARG00000013312	PRPF8	93	100.000	Ovis_aries
ENSPVAG00000002134	PRPF8	93	100.000	ENSPPAG00000042753	PRPF8	93	100.000	Pan_paniscus
ENSPVAG00000002134	PRPF8	93	100.000	ENSPPRG00000008746	PRPF8	93	100.000	Panthera_pardus
ENSPVAG00000002134	PRPF8	93	100.000	ENSPTIG00000019200	PRPF8	93	100.000	Panthera_tigris_altaica
ENSPVAG00000002134	PRPF8	93	100.000	ENSPTRG00000039576	PRPF8	93	100.000	Pan_troglodytes
ENSPVAG00000002134	PRPF8	93	99.557	ENSPANG00000024607	PRPF8	92	99.557	Papio_anubis
ENSPVAG00000002134	PRPF8	93	98.780	ENSPKIG00000011201	prpf8	93	98.780	Paramormyrops_kingsleyae
ENSPVAG00000002134	PRPF8	93	99.335	ENSPSIG00000013393	PRPF8	93	99.335	Pelodiscus_sinensis
ENSPVAG00000002134	PRPF8	93	100.000	ENSPEMG00000021699	Prpf8	93	100.000	Peromyscus_maniculatus_bairdii
ENSPVAG00000002134	PRPF8	88	95.949	ENSPMAG00000005438	prpf8	92	95.949	Petromyzon_marinus
ENSPVAG00000002134	PRPF8	93	99.653	ENSPCIG00000022603	PRPF8	93	100.000	Phascolarctos_cinereus
ENSPVAG00000002134	PRPF8	93	98.614	ENSPFOG00000007005	prpf8	93	98.614	Poecilia_formosa
ENSPVAG00000002134	PRPF8	93	96.785	ENSPLAG00000020777	prpf8	93	96.785	Poecilia_latipinna
ENSPVAG00000002134	PRPF8	93	98.614	ENSPMEG00000004051	prpf8	93	98.614	Poecilia_mexicana
ENSPVAG00000002134	PRPF8	93	98.559	ENSPREG00000021902	prpf8	93	98.559	Poecilia_reticulata
ENSPVAG00000002134	PRPF8	93	100.000	ENSPPYG00000007777	PRPF8	93	100.000	Pongo_abelii
ENSPVAG00000002134	PRPF8	83	100.000	ENSPCAG00000008938	PRPF8	83	100.000	Procavia_capensis
ENSPVAG00000002134	PRPF8	93	100.000	ENSPCOG00000015182	PRPF8	93	100.000	Propithecus_coquereli
ENSPVAG00000002134	PRPF8	93	98.559	ENSPNYG00000016356	prpf8	93	98.559	Pundamilia_nyererei
ENSPVAG00000002134	PRPF8	93	98.559	ENSPNAG00000009247	prpf8	93	98.559	Pygocentrus_nattereri
ENSPVAG00000002134	PRPF8	93	100.000	ENSRNOG00000003495	Prpf8	93	100.000	Rattus_norvegicus
ENSPVAG00000002134	PRPF8	93	100.000	ENSRBIG00000031219	PRPF8	93	100.000	Rhinopithecus_bieti
ENSPVAG00000002134	PRPF8	93	100.000	ENSRROG00000038014	PRPF8	93	100.000	Rhinopithecus_roxellana
ENSPVAG00000002134	PRPF8	90	65.831	YHR165C	PRP8	88	65.886	Saccharomyces_cerevisiae
ENSPVAG00000002134	PRPF8	93	100.000	ENSSBOG00000029717	PRPF8	93	100.000	Saimiri_boliviensis_boliviensis
ENSPVAG00000002134	PRPF8	93	99.653	ENSSHAG00000006167	PRPF8	93	99.653	Sarcophilus_harrisii
ENSPVAG00000002134	PRPF8	93	98.614	ENSSFOG00015013905	prpf8	93	98.614	Scleropages_formosus
ENSPVAG00000002134	PRPF8	93	98.448	ENSSMAG00000017736	prpf8	93	98.448	Scophthalmus_maximus
ENSPVAG00000002134	PRPF8	93	98.614	ENSSDUG00000003029	prpf8	93	98.614	Seriola_dumerili
ENSPVAG00000002134	PRPF8	65	98.744	ENSSLDG00000017096	prpf8	95	98.744	Seriola_lalandi_dorsalis
ENSPVAG00000002134	PRPF8	78	100.000	ENSSARG00000002892	PRPF8	78	100.000	Sorex_araneus
ENSPVAG00000002134	PRPF8	93	99.390	ENSSPUG00000007463	PRPF8	93	99.390	Sphenodon_punctatus
ENSPVAG00000002134	PRPF8	93	97.838	ENSSPAG00000015639	prpf8	93	97.838	Stegastes_partitus
ENSPVAG00000002134	PRPF8	93	100.000	ENSSSCG00000017817	PRPF8	93	100.000	Sus_scrofa
ENSPVAG00000002134	PRPF8	93	99.446	ENSTGUG00000005648	-	93	99.446	Taeniopygia_guttata
ENSPVAG00000002134	PRPF8	93	98.448	ENSTRUG00000015906	prpf8	93	98.448	Takifugu_rubripes
ENSPVAG00000002134	PRPF8	87	98.674	ENSTNIG00000003460	prpf8	92	98.674	Tetraodon_nigroviridis
ENSPVAG00000002134	PRPF8	88	100.000	ENSTBEG00000006431	PRPF8	88	100.000	Tupaia_belangeri
ENSPVAG00000002134	PRPF8	93	100.000	ENSTTRG00000006869	PRPF8	93	100.000	Tursiops_truncatus
ENSPVAG00000002134	PRPF8	51	100.000	ENSUAMG00000015644	-	90	100.000	Ursus_americanus
ENSPVAG00000002134	PRPF8	93	100.000	ENSUMAG00000009385	PRPF8	93	100.000	Ursus_maritimus
ENSPVAG00000002134	PRPF8	66	99.310	ENSVPAG00000006063	-	66	99.310	Vicugna_pacos
ENSPVAG00000002134	PRPF8	93	100.000	ENSVVUG00000021695	PRPF8	92	100.000	Vulpes_vulpes
ENSPVAG00000002134	PRPF8	93	98.892	ENSXETG00000022259	prpf8	93	98.892	Xenopus_tropicalis
ENSPVAG00000002134	PRPF8	93	98.614	ENSXCOG00000012775	prpf8	93	98.614	Xiphophorus_couchianus
ENSPVAG00000002134	PRPF8	93	98.614	ENSXMAG00000008505	prpf8	93	98.614	Xiphophorus_maculatus