EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPVAG00000002149 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Pteropus_vampyrus
Status
putative
Strand
Plus strand
Length
48683 bases
Position
chrGeneScaffold_2866:128978-177660
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPVAP00000002031tRNA_anti-codonPF01336.252.4e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPVAT00000002150RPA1-2011851-ENSPVAP00000002031616 (aa)-UPI00018B4557
Gene Model
Click here to download ENSPVAG00000002149's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000002149's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPVAG00000002149RPA19961.664ENSAPOG00000011658rpa19961.664Acanthochromis_polyacanthus
ENSPVAG00000002149RPA19162.302ENSAPOG00000019409RPA18962.302Acanthochromis_polyacanthus
ENSPVAG00000002149RPA19992.118ENSAMEG00000007706RPA19892.118Ailuropoda_melanoleuca
ENSPVAG00000002149RPA19557.313ENSACIG00000007277rpa19957.313Amphilophus_citrinellus
ENSPVAG00000002149RPA19557.770ENSACIG00000012881RPA19957.770Amphilophus_citrinellus
ENSPVAG00000002149RPA19953.740ENSAOCG00000009003RPA19955.146Amphiprion_ocellaris
ENSPVAG00000002149RPA19962.215ENSAOCG00000023376rpa19962.931Amphiprion_ocellaris
ENSPVAG00000002149RPA19962.052ENSAPEG00000008634rpa19962.759Amphiprion_percula
ENSPVAG00000002149RPA19952.853ENSAPEG00000019132RPA19953.904Amphiprion_percula
ENSPVAG00000002149RPA19954.824ENSATEG00000006443RPA19954.824Anabas_testudineus
ENSPVAG00000002149RPA19462.715ENSATEG00000022024rpa19962.715Anabas_testudineus
ENSPVAG00000002149RPA19864.106ENSAPLG00000012442RPA110064.106Anas_platyrhynchos
ENSPVAG00000002149RPA19962.540ENSACAG00000014490RPA19963.328Anolis_carolinensis
ENSPVAG00000002149RPA19889.684ENSANAG00000023456RPA19989.684Aotus_nancymaae
ENSPVAG00000002149RPA19363.066ENSACLG00000006640rpa19963.066Astatotilapia_calliptera
ENSPVAG00000002149RPA19957.477ENSACLG00000005223RPA19957.477Astatotilapia_calliptera
ENSPVAG00000002149RPA19961.401ENSAMXG00000008418rpa19961.789Astyanax_mexicanus
ENSPVAG00000002149RPA110092.695ENSBTAG00000009711RPA110092.695Bos_taurus
ENSPVAG00000002149RPA19989.739ENSCJAG00000001848RPA19989.739Callithrix_jacchus
ENSPVAG00000002149RPA110091.558ENSCAFG00000019249RPA110091.558Canis_familiaris
ENSPVAG00000002149RPA110091.558ENSCAFG00020009847RPA110091.558Canis_lupus_dingo
ENSPVAG00000002149RPA110092.695ENSCHIG00000026308RPA110092.695Capra_hircus
ENSPVAG00000002149RPA110090.600ENSTSYG00000003482-10090.600Carlito_syrichta
ENSPVAG00000002149RPA19987.622ENSCPOG00000000035RPA19987.622Cavia_porcellus
ENSPVAG00000002149RPA19978.930ENSCCAG00000010981RPA19978.930Cebus_capucinus
ENSPVAG00000002149RPA19989.088ENSCLAG00000005185-9989.088Chinchilla_lanigera
ENSPVAG00000002149RPA19984.691ENSCLAG00000015045-9984.691Chinchilla_lanigera
ENSPVAG00000002149RPA19977.147ENSCSAG00000013833RPA19977.832Chlorocebus_sabaeus
ENSPVAG00000002149RPA17191.572ENSCHOG00000009454-10091.572Choloepus_hoffmanni
ENSPVAG00000002149RPA19587.925ENSCHOG00000013540-10087.925Choloepus_hoffmanni
ENSPVAG00000002149RPA19977.398ENSCPBG00000020377RPA19978.070Chrysemys_picta_bellii
ENSPVAG00000002149RPA19940.705ENSCING00000023482-9940.705Ciona_intestinalis
ENSPVAG00000002149RPA19885.406ENSCANG00000030911RPA19985.406Colobus_angolensis_palliatus
ENSPVAG00000002149RPA19988.835ENSCGRG00001008197Rpa19988.835Cricetulus_griseus_chok1gshd
ENSPVAG00000002149RPA18188.363ENSCGRG00000000582Rpa19988.363Cricetulus_griseus_crigri
ENSPVAG00000002149RPA19960.685ENSCSEG00000013066rpa19960.685Cynoglossus_semilaevis
ENSPVAG00000002149RPA19952.070ENSCSEG00000012726RPA19853.436Cynoglossus_semilaevis
ENSPVAG00000002149RPA19452.969ENSCVAG00000013446-9552.969Cyprinodon_variegatus
ENSPVAG00000002149RPA19962.908ENSCVAG00000019431rpa19963.222Cyprinodon_variegatus
ENSPVAG00000002149RPA19962.439ENSDARG00000003938rpa19962.439Danio_rerio
ENSPVAG00000002149RPA19990.610ENSDNOG00000017218RPA19990.610Dasypus_novemcinctus
ENSPVAG00000002149RPA110089.773ENSDORG00000006199Rpa110089.773Dipodomys_ordii
ENSPVAG00000002149RPA19942.512FBgn0010173RpA-709942.673Drosophila_melanogaster
ENSPVAG00000002149RPA18385.749ENSETEG00000017608RPA18285.749Echinops_telfairi
ENSPVAG00000002149RPA19892.525ENSEASG00005009372RPA110090.307Equus_asinus_asinus
ENSPVAG00000002149RPA110092.695ENSECAG00000023886RPA110092.695Equus_caballus
ENSPVAG00000002149RPA16892.619ENSEEUG00000002186-6892.619Erinaceus_europaeus
ENSPVAG00000002149RPA18854.512ENSELUG00000006136RPA19954.512Esox_lucius
ENSPVAG00000002149RPA19960.940ENSELUG00000021071rpa19961.102Esox_lucius
ENSPVAG00000002149RPA110090.924ENSFCAG00000006306RPA19990.924Felis_catus
ENSPVAG00000002149RPA110073.344ENSFALG00000006575RPA19973.344Ficedula_albicollis
ENSPVAG00000002149RPA19988.925ENSFDAG00000007720RPA19988.925Fukomys_damarensis
ENSPVAG00000002149RPA19960.884ENSFHEG00000003580rpa19960.884Fundulus_heteroclitus
ENSPVAG00000002149RPA19958.143ENSGMOG00000010382rpa110058.143Gadus_morhua
ENSPVAG00000002149RPA110073.906ENSGALG00000003072RPA19974.146Gallus_gallus
ENSPVAG00000002149RPA19953.647ENSGAFG00000020953RPA19954.532Gambusia_affinis
ENSPVAG00000002149RPA19961.944ENSGAFG00000012916rpa19961.944Gambusia_affinis
ENSPVAG00000002149RPA19959.935ENSGACG00000010856rpa19959.935Gasterosteus_aculeatus
ENSPVAG00000002149RPA19977.398ENSGAGG00000013611RPA19977.398Gopherus_agassizii
ENSPVAG00000002149RPA110085.877ENSGGOG00000014186RPA110085.877Gorilla_gorilla
ENSPVAG00000002149RPA19961.889ENSHBUG00000017773rpa19961.889Haplochromis_burtoni
ENSPVAG00000002149RPA19654.090ENSHBUG00000009348RPA19954.090Haplochromis_burtoni
ENSPVAG00000002149RPA19989.251ENSHGLG00000008846RPA110089.251Heterocephalus_glaber_female
ENSPVAG00000002149RPA19989.251ENSHGLG00100017755-10089.251Heterocephalus_glaber_male
ENSPVAG00000002149RPA19976.835ENSHGLG00100002005-9976.835Heterocephalus_glaber_male
ENSPVAG00000002149RPA110083.766ENSHGLG00100000799-10083.766Heterocephalus_glaber_male
ENSPVAG00000002149RPA19942.834ENSHCOG00000000351RPA19942.834Hippocampus_comes
ENSPVAG00000002149RPA19960.032ENSHCOG00000001401rpa19960.323Hippocampus_comes
ENSPVAG00000002149RPA19961.789ENSIPUG00000004400rpa19961.789Ictalurus_punctatus
ENSPVAG00000002149RPA19884.046ENSSTOG00000022475RPA19884.046Ictidomys_tridecemlineatus
ENSPVAG00000002149RPA19589.626ENSJJAG00000000876Rpa19889.626Jaculus_jaculus
ENSPVAG00000002149RPA19955.250ENSKMAG00000000234RPA19955.250Kryptolebias_marmoratus
ENSPVAG00000002149RPA19961.301ENSKMAG00000005605rpa19961.789Kryptolebias_marmoratus
ENSPVAG00000002149RPA19862.358ENSLBEG00000002281RPA18662.358Labrus_bergylta
ENSPVAG00000002149RPA19961.075ENSLBEG00000021604rpa19961.075Labrus_bergylta
ENSPVAG00000002149RPA18166.200ENSLACG00000007210RPA19966.200Latimeria_chalumnae
ENSPVAG00000002149RPA19966.450ENSLOCG00000006397rpa19966.450Lepisosteus_oculatus
ENSPVAG00000002149RPA19989.677ENSLAFG00000015354RPA19989.677Loxodonta_africana
ENSPVAG00000002149RPA18290.119ENSMFAG00000036138-10090.927Macaca_fascicularis
ENSPVAG00000002149RPA19981.951ENSMMUG00000002442-9981.951Macaca_mulatta
ENSPVAG00000002149RPA19889.055ENSMMUG00000011604-9989.735Macaca_mulatta
ENSPVAG00000002149RPA18886.667ENSMNEG00000029837-9986.667Macaca_nemestrina
ENSPVAG00000002149RPA19985.505ENSMNEG00000031632-9986.179Macaca_nemestrina
ENSPVAG00000002149RPA19883.113ENSMLEG00000038768-9983.802Mandrillus_leucophaeus
ENSPVAG00000002149RPA19961.401ENSMAMG00000017993rpa19961.401Mastacembelus_armatus
ENSPVAG00000002149RPA19951.484ENSMAMG00000020097RPA19951.484Mastacembelus_armatus
ENSPVAG00000002149RPA19961.889ENSMZEG00005007551rpa19961.889Maylandia_zebra
ENSPVAG00000002149RPA19957.477ENSMZEG00005024731RPA19957.477Maylandia_zebra
ENSPVAG00000002149RPA19973.607ENSMGAG00000005315RPA19873.607Meleagris_gallopavo
ENSPVAG00000002149RPA19789.833ENSMAUG00000010474Rpa19989.833Mesocricetus_auratus
ENSPVAG00000002149RPA110090.422ENSMICG00000012867RPA110090.422Microcebus_murinus
ENSPVAG00000002149RPA19987.602ENSMOCG00000013019Rpa19987.602Microtus_ochrogaster
ENSPVAG00000002149RPA19960.423ENSMMOG00000014292rpa19961.824Mola_mola
ENSPVAG00000002149RPA19755.593ENSMMOG00000010868RPA19759.471Mola_mola
ENSPVAG00000002149RPA19983.713ENSMODG00000010549RPA19983.713Monodelphis_domestica
ENSPVAG00000002149RPA19561.224ENSMALG00000001208RPA18161.224Monopterus_albus
ENSPVAG00000002149RPA19962.520ENSMALG00000011453rpa19962.684Monopterus_albus
ENSPVAG00000002149RPA19987.987MGP_CAROLIEiJ_G0016734Rpa19987.987Mus_caroli
ENSPVAG00000002149RPA19985.691ENSMUSG00000000751Rpa19985.691Mus_musculus
ENSPVAG00000002149RPA19989.015MGP_PahariEiJ_G0017871Rpa19989.015Mus_pahari
ENSPVAG00000002149RPA19985.714MGP_SPRETEiJ_G0017577Rpa19985.714Mus_spretus
ENSPVAG00000002149RPA110091.396ENSMPUG00000013119RPA110091.396Mustela_putorius_furo
ENSPVAG00000002149RPA19990.453ENSMLUG00000006113RPA19990.453Myotis_lucifugus
ENSPVAG00000002149RPA19985.089ENSNGAG00000004522Rpa19785.089Nannospalax_galili
ENSPVAG00000002149RPA19656.324ENSNBRG00000009672RPA19556.324Neolamprologus_brichardi
ENSPVAG00000002149RPA19462.867ENSNBRG00000020595rpa19962.867Neolamprologus_brichardi
ENSPVAG00000002149RPA110088.312ENSNLEG00000017149RPA110088.817Nomascus_leucogenys
ENSPVAG00000002149RPA19872.848ENSMEUG00000006714RPA19972.848Notamacropus_eugenii
ENSPVAG00000002149RPA19586.218ENSODEG00000009038RPA19983.146Octodon_degus
ENSPVAG00000002149RPA19962.158ENSONIG00000013135rpa19962.158Oreochromis_niloticus
ENSPVAG00000002149RPA19883.056ENSOANG00000010880RPA19983.223Ornithorhynchus_anatinus
ENSPVAG00000002149RPA110085.139ENSOCUG00000001504RPA110085.139Oryctolagus_cuniculus
ENSPVAG00000002149RPA19961.138ENSORLG00000004856rpa110061.138Oryzias_latipes
ENSPVAG00000002149RPA19952.968ENSORLG00000003368RPA19952.968Oryzias_latipes
ENSPVAG00000002149RPA19961.138ENSORLG00020008980rpa110061.138Oryzias_latipes_hni
ENSPVAG00000002149RPA19951.570ENSORLG00020015284RPA19951.570Oryzias_latipes_hni
ENSPVAG00000002149RPA16762.319ENSORLG00015005867-9462.319Oryzias_latipes_hsok
ENSPVAG00000002149RPA19953.488ENSORLG00015020383RPA19953.488Oryzias_latipes_hsok
ENSPVAG00000002149RPA19961.138ENSORLG00015013982rpa110061.138Oryzias_latipes_hsok
ENSPVAG00000002149RPA19654.620ENSOMEG00000011040RPA19956.164Oryzias_melastigma
ENSPVAG00000002149RPA19960.163ENSOMEG00000004704rpa110060.163Oryzias_melastigma
ENSPVAG00000002149RPA110089.773ENSOGAG00000005581-10089.773Otolemur_garnettii
ENSPVAG00000002149RPA19488.421ENSOGAG00000029379-10088.421Otolemur_garnettii
ENSPVAG00000002149RPA110092.695ENSOARG00000014479RPA110092.695Ovis_aries
ENSPVAG00000002149RPA110088.799ENSPPAG00000039680RPA110089.303Pan_paniscus
ENSPVAG00000002149RPA19991.205ENSPPRG00000011807RPA19991.205Panthera_pardus
ENSPVAG00000002149RPA110090.762ENSPTIG00000007898RPA19990.762Panthera_tigris_altaica
ENSPVAG00000002149RPA110088.799ENSPTRG00000008539RPA110089.303Pan_troglodytes
ENSPVAG00000002149RPA19988.762ENSPANG00000024592RPA19989.431Papio_anubis
ENSPVAG00000002149RPA19460.377ENSPKIG00000008053rpa19461.644Paramormyrops_kingsleyae
ENSPVAG00000002149RPA19776.833ENSPSIG00000015617RPA19976.833Pelodiscus_sinensis
ENSPVAG00000002149RPA19960.685ENSPMGG00000011589rpa19960.848Periophthalmus_magnuspinnatus
ENSPVAG00000002149RPA19953.722ENSPMGG00000000543RPA19956.360Periophthalmus_magnuspinnatus
ENSPVAG00000002149RPA19989.233ENSPEMG00000021061Rpa19989.233Peromyscus_maniculatus_bairdii
ENSPVAG00000002149RPA110081.848ENSPCIG00000019049RPA19982.068Phascolarctos_cinereus
ENSPVAG00000002149RPA19961.928ENSPFOG00000003987rpa19961.928Poecilia_formosa
ENSPVAG00000002149RPA19453.301ENSPLAG00000008844-9753.301Poecilia_latipinna
ENSPVAG00000002149RPA19961.601ENSPLAG00000004984rpa19961.438Poecilia_latipinna
ENSPVAG00000002149RPA19962.092ENSPMEG00000020602rpa19962.544Poecilia_mexicana
ENSPVAG00000002149RPA19453.205ENSPMEG00000003627-9754.414Poecilia_mexicana
ENSPVAG00000002149RPA19156.150ENSPREG00000010174rpa19555.536Poecilia_reticulata
ENSPVAG00000002149RPA19951.846ENSPREG00000010119RPA110051.238Poecilia_reticulata
ENSPVAG00000002149RPA110091.396ENSPCOG00000001799RPA110091.396Propithecus_coquereli
ENSPVAG00000002149RPA19962.052ENSPNYG00000016316rpa19963.021Pundamilia_nyererei
ENSPVAG00000002149RPA19957.165ENSPNYG00000024165RPA19957.165Pundamilia_nyererei
ENSPVAG00000002149RPA19854.485ENSPNAG00000008599rpa19953.130Pygocentrus_nattereri
ENSPVAG00000002149RPA19989.070ENSRNOG00000003123Rpa19989.070Rattus_norvegicus
ENSPVAG00000002149RPA19988.780ENSRBIG00000036587RPA19988.780Rhinopithecus_bieti
ENSPVAG00000002149RPA19983.740ENSRROG00000043278RPA19983.740Rhinopithecus_roxellana
ENSPVAG00000002149RPA19731.915YAR007CRFA19731.915Saccharomyces_cerevisiae
ENSPVAG00000002149RPA19885.880ENSSBOG00000030233RPA19985.880Saimiri_boliviensis_boliviensis
ENSPVAG00000002149RPA19983.443ENSSHAG00000007969RPA19883.770Sarcophilus_harrisii
ENSPVAG00000002149RPA19963.889ENSSFOG00015005362rpa19263.889Scleropages_formosus
ENSPVAG00000002149RPA19951.952ENSSMAG00000019746RPA19951.952Scophthalmus_maximus
ENSPVAG00000002149RPA19963.192ENSSDUG00000011949rpa19963.192Seriola_dumerili
ENSPVAG00000002149RPA18965.278ENSSDUG00000016358RPA19661.042Seriola_dumerili
ENSPVAG00000002149RPA19963.192ENSSLDG00000011806rpa19963.192Seriola_lalandi_dorsalis
ENSPVAG00000002149RPA19948.905ENSSLDG00000020784RPA19160.575Seriola_lalandi_dorsalis
ENSPVAG00000002149RPA18879.644ENSSARG00000007506RPA18979.644Sorex_araneus
ENSPVAG00000002149RPA19772.941ENSSPUG00000007223RPA19972.941Sphenodon_punctatus
ENSPVAG00000002149RPA19961.463ENSSPAG00000009903rpa19961.338Stegastes_partitus
ENSPVAG00000002149RPA19956.402ENSSPAG00000011165RPA19956.402Stegastes_partitus
ENSPVAG00000002149RPA19892.869ENSSSCG00000017822RPA110092.869Sus_scrofa
ENSPVAG00000002149RPA110072.934ENSTGUG00000005775RPA19973.171Taeniopygia_guttata
ENSPVAG00000002149RPA19962.664ENSTRUG00000003616rpa19962.664Takifugu_rubripes
ENSPVAG00000002149RPA19957.692ENSTRUG00000000405RPA19258.824Takifugu_rubripes
ENSPVAG00000002149RPA19962.885ENSTNIG00000016199rpa19962.885Tetraodon_nigroviridis
ENSPVAG00000002149RPA187100.000ENSTBEG00000002709RPA189100.000Tupaia_belangeri
ENSPVAG00000002149RPA19991.205ENSTTRG00000001169RPA19991.205Tursiops_truncatus
ENSPVAG00000002149RPA18897.826ENSUAMG00000015676RPA19992.871Ursus_americanus
ENSPVAG00000002149RPA110092.532ENSUMAG00000009328RPA110092.532Ursus_maritimus
ENSPVAG00000002149RPA110090.260ENSVPAG00000009443RPA110090.260Vicugna_pacos
ENSPVAG00000002149RPA110092.045ENSVVUG00000021715RPA110092.045Vulpes_vulpes
ENSPVAG00000002149RPA19972.903ENSXETG00000013538rpa19974.262Xenopus_tropicalis
ENSPVAG00000002149RPA19555.726ENSXCOG00000009899-9955.726Xiphophorus_couchianus
ENSPVAG00000002149RPA19259.825ENSXCOG00000010068rpa19560.000Xiphophorus_couchianus
ENSPVAG00000002149RPA19164.237ENSXMAG00000010333RPA18564.237Xiphophorus_maculatus
ENSPVAG00000002149RPA19960.784ENSXMAG00000004102rpa19962.390Xiphophorus_maculatus

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