EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPVAG00000002187 (Gene tree)
Gene ID
-
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Pteropus_vampyrus
Status
putative
Strand
Plus strand
Length
9902 bases
Position
chrscaffold_9628:43615-53516
Accession
8557
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPVAP00000002066PABPPF00658.189.9e-3211
ENSPVAP00000002066RRM_5PF13893.67.9e-0812
ENSPVAP00000002066RRM_5PF13893.67.9e-0822
ENSPVAP00000002066RRM_1PF00076.222.5e-7013
ENSPVAP00000002066RRM_1PF00076.222.5e-7023
ENSPVAP00000002066RRM_1PF00076.222.5e-7033
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPVAT00000002187PABPC4-2011785-ENSPVAP00000002066594 (aa)-UPI00018B1648
Gene Model
Click here to download ENSPVAG00000002187's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000002187's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPVAG00000002187PABPC45367.213ENSPVAG00000006465PABPC59467.213
ENSPVAG00000002187PABPC49958.784ENSPVAG00000012663PABPC1L9958.784
ENSPVAG00000002187PABPC49973.388ENSPVAG00000016640PABPC19973.388
ENSPVAG00000002187PABPC45136.842ENSPVAG00000006406-6436.842
ENSPVAG00000002187PABPC45274.101ENSPVAG00000016117-9874.101
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPVAG00000002187PABPC410098.655ENSG00000090621PABPC499100.000Homo_sapiens
ENSPVAG00000002187PABPC49978.151ENSAPOG00000001161pabpc49878.477Acanthochromis_polyacanthus
ENSPVAG00000002187PABPC49955.068ENSAMEG00000015083-8955.068Ailuropoda_melanoleuca
ENSPVAG00000002187PABPC410098.992ENSAMEG00000011535-9998.992Ailuropoda_melanoleuca
ENSPVAG00000002187PABPC410078.974ENSACIG00000023343pabpc49979.636Amphilophus_citrinellus
ENSPVAG00000002187PABPC49978.655ENSAOCG00000021529pabpc49990.814Amphiprion_ocellaris
ENSPVAG00000002187PABPC49978.655ENSAPEG00000019196pabpc49878.974Amphiprion_percula
ENSPVAG00000002187PABPC49977.722ENSATEG00000007402pabpc49878.053Anabas_testudineus
ENSPVAG00000002187PABPC49987.374ENSAPLG00000009729-10087.374Anas_platyrhynchos
ENSPVAG00000002187PABPC49985.544ENSACAG00000002544PABPC410085.544Anolis_carolinensis
ENSPVAG00000002187PABPC410098.487ENSANAG00000025079PABPC49998.487Aotus_nancymaae
ENSPVAG00000002187PABPC410078.311ENSACLG00000019558pabpc49878.974Astatotilapia_calliptera
ENSPVAG00000002187PABPC49973.862ENSAMXG00000018779pabpc49774.536Astyanax_mexicanus
ENSPVAG00000002187PABPC410096.141ENSBTAG00000017125PABPC49996.141Bos_taurus
ENSPVAG00000002187PABPC45093.204ENSBTAG00000048536-8693.204Bos_taurus
ENSPVAG00000002187PABPC410098.319ENSCJAG00000002512-9998.319Callithrix_jacchus
ENSPVAG00000002187PABPC47282.784ENSCJAG00000045953-9382.784Callithrix_jacchus
ENSPVAG00000002187PABPC410098.992ENSCAFG00000003081PABPC49994.286Canis_familiaris
ENSPVAG00000002187PABPC410098.992ENSCAFG00020004161PABPC49998.992Canis_lupus_dingo
ENSPVAG00000002187PABPC49976.223ENSCHIG00000023385-8976.223Capra_hircus
ENSPVAG00000002187PABPC410098.992ENSCHIG00000019398-9998.992Capra_hircus
ENSPVAG00000002187PABPC410098.655ENSTSYG00000006532PABPC49998.655Carlito_syrichta
ENSPVAG00000002187PABPC410098.319ENSCAPG00000015984PABPC49998.319Cavia_aperea
ENSPVAG00000002187PABPC410098.655ENSCPOG00000009552PABPC49998.655Cavia_porcellus
ENSPVAG00000002187PABPC410098.487ENSCCAG00000037306PABPC49998.487Cebus_capucinus
ENSPVAG00000002187PABPC410098.824ENSCATG00000042164PABPC49998.824Cercocebus_atys
ENSPVAG00000002187PABPC410098.319ENSCLAG00000011899PABPC49998.319Chinchilla_lanigera
ENSPVAG00000002187PABPC410098.824ENSCSAG00000001135PABPC49998.824Chlorocebus_sabaeus
ENSPVAG00000002187PABPC48197.361ENSCHOG00000005327PABPC48197.361Choloepus_hoffmanni
ENSPVAG00000002187PABPC49986.869ENSCPBG00000001038PABPC49986.869Chrysemys_picta_bellii
ENSPVAG00000002187PABPC410098.655ENSCANG00000034177PABPC410098.655Colobus_angolensis_palliatus
ENSPVAG00000002187PABPC410096.661ENSCGRG00001018166Pabpc49996.661Cricetulus_griseus_chok1gshd
ENSPVAG00000002187PABPC410094.157ENSCGRG00000009777Pabpc410094.157Cricetulus_griseus_crigri
ENSPVAG00000002187PABPC410077.815ENSCSEG00000000130pabpc49878.477Cynoglossus_semilaevis
ENSPVAG00000002187PABPC410078.571ENSCVAG00000019246pabpc49979.236Cyprinodon_variegatus
ENSPVAG00000002187PABPC49980.270ENSDARG00000059259pabpc49880.911Danio_rerio
ENSPVAG00000002187PABPC49799.138ENSDNOG00000018444-9999.138Dasypus_novemcinctus
ENSPVAG00000002187PABPC410095.966ENSDORG00000011581Pabpc49995.966Dipodomys_ordii
ENSPVAG00000002187PABPC49661.687ENSETEG00000009172-9961.739Echinops_telfairi
ENSPVAG00000002187PABPC49596.755ENSETEG00000018453-7596.755Echinops_telfairi
ENSPVAG00000002187PABPC49771.184ENSEBUG00000013782pabpc49970.973Eptatretus_burgeri
ENSPVAG00000002187PABPC49971.644ENSEBUG00000000992pabpc49878.643Eptatretus_burgeri
ENSPVAG00000002187PABPC410099.160ENSEASG00005014119PABPC49999.160Equus_asinus_asinus
ENSPVAG00000002187PABPC410099.160ENSECAG00000009396PABPC49999.160Equus_caballus
ENSPVAG00000002187PABPC410095.294ENSEEUG00000002962PABPC49995.294Erinaceus_europaeus
ENSPVAG00000002187PABPC49979.293ENSELUG00000003195pabpc49779.933Esox_lucius
ENSPVAG00000002187PABPC410099.160ENSFCAG00000015254-9999.160Felis_catus
ENSPVAG00000002187PABPC49986.195ENSFALG00000000543PABPC49986.195Ficedula_albicollis
ENSPVAG00000002187PABPC49967.010ENSFDAG00000010581-10062.963Fukomys_damarensis
ENSPVAG00000002187PABPC410098.992ENSFDAG00000020016-9998.992Fukomys_damarensis
ENSPVAG00000002187PABPC410078.607ENSFHEG00000007548pabpc49888.221Fundulus_heteroclitus
ENSPVAG00000002187PABPC49978.057ENSGMOG00000019025pabpc49778.727Gadus_morhua
ENSPVAG00000002187PABPC49987.037ENSGALG00000003800PABPC49987.037Gallus_gallus
ENSPVAG00000002187PABPC410078.702ENSGAFG00000018195pabpc49895.968Gambusia_affinis
ENSPVAG00000002187PABPC410077.152ENSGACG00000007179pabpc49877.851Gasterosteus_aculeatus
ENSPVAG00000002187PABPC49986.869ENSGAGG00000001888PABPC49986.869Gopherus_agassizii
ENSPVAG00000002187PABPC410098.655ENSGGOG00000004002PABPC49998.655Gorilla_gorilla
ENSPVAG00000002187PABPC410078.477ENSHBUG00000020206pabpc49879.139Haplochromis_burtoni
ENSPVAG00000002187PABPC410098.824ENSHGLG00000011162PABPC49998.824Heterocephalus_glaber_female
ENSPVAG00000002187PABPC410096.303ENSHGLG00100001580PABPC49996.303Heterocephalus_glaber_male
ENSPVAG00000002187PABPC410077.778ENSHCOG00000012694pabpc49878.441Hippocampus_comes
ENSPVAG00000002187PABPC49878.194ENSIPUG00000016620pabpc49878.333Ictalurus_punctatus
ENSPVAG00000002187PABPC410096.134ENSSTOG00000010416PABPC49996.134Ictidomys_tridecemlineatus
ENSPVAG00000002187PABPC410094.444ENSJJAG00000007781Pabpc49994.444Jaculus_jaculus
ENSPVAG00000002187PABPC49991.129ENSKMAG00000013597pabpc49878.833Kryptolebias_marmoratus
ENSPVAG00000002187PABPC410077.393ENSLBEG00000013654pabpc49878.218Labrus_bergylta
ENSPVAG00000002187PABPC49983.110ENSLACG00000011907PABPC49983.110Latimeria_chalumnae
ENSPVAG00000002187PABPC410081.167ENSLOCG00000001877pabpc49882.000Lepisosteus_oculatus
ENSPVAG00000002187PABPC410098.992ENSLAFG00000000151PABPC49998.992Loxodonta_africana
ENSPVAG00000002187PABPC410098.824ENSMFAG00000041481PABPC49998.824Macaca_fascicularis
ENSPVAG00000002187PABPC410098.824ENSMMUG00000007497PABPC49998.824Macaca_mulatta
ENSPVAG00000002187PABPC410098.655ENSMNEG00000043054PABPC49998.655Macaca_nemestrina
ENSPVAG00000002187PABPC410098.824ENSMLEG00000040716PABPC49998.824Mandrillus_leucophaeus
ENSPVAG00000002187PABPC49978.319ENSMAMG00000010025pabpc49878.667Mastacembelus_armatus
ENSPVAG00000002187PABPC410078.146ENSMZEG00005006141pabpc49878.808Maylandia_zebra
ENSPVAG00000002187PABPC49987.227ENSMGAG00000005408PABPC49987.227Meleagris_gallopavo
ENSPVAG00000002187PABPC46388.462ENSMAUG00000001295-9788.462Mesocricetus_auratus
ENSPVAG00000002187PABPC45381.301ENSMAUG00000004089-8981.301Mesocricetus_auratus
ENSPVAG00000002187PABPC46595.960ENSMAUG00000019763-6595.960Mesocricetus_auratus
ENSPVAG00000002187PABPC410073.623ENSMICG00000036729-10073.311Microcebus_murinus
ENSPVAG00000002187PABPC48894.106ENSMICG00000016633-9797.872Microcebus_murinus
ENSPVAG00000002187PABPC410096.995ENSMOCG00000006763Pabpc49996.995Microtus_ochrogaster
ENSPVAG00000002187PABPC410073.115ENSMMOG00000002363pabpc49877.038Mola_mola
ENSPVAG00000002187PABPC45374.051ENSMODG00000018051-8974.051Monodelphis_domestica
ENSPVAG00000002187PABPC49888.679ENSMODG00000017657-9988.235Monodelphis_domestica
ENSPVAG00000002187PABPC49977.889ENSMALG00000011017pabpc49878.218Monopterus_albus
ENSPVAG00000002187PABPC49983.390MGP_CAROLIEiJ_G0024864-10083.390Mus_caroli
ENSPVAG00000002187PABPC410097.479MGP_CAROLIEiJ_G0026435-100100.000Mus_caroli
ENSPVAG00000002187PABPC410097.479ENSMUSG00000011257Pabpc49899.029Mus_musculus
ENSPVAG00000002187PABPC410097.143MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSPVAG00000002187PABPC410087.695MGP_SPRETEiJ_G0027415Pabpc410099.029Mus_spretus
ENSPVAG00000002187PABPC410099.160ENSMPUG00000014414-9999.160Mustela_putorius_furo
ENSPVAG00000002187PABPC49652.083ENSMPUG00000006836-9152.083Mustela_putorius_furo
ENSPVAG00000002187PABPC410091.261ENSMLUG00000012068PABPC49991.261Myotis_lucifugus
ENSPVAG00000002187PABPC410095.966ENSNGAG00000018292Pabpc49995.966Nannospalax_galili
ENSPVAG00000002187PABPC45492.105ENSNBRG00000009708pabpc49892.105Neolamprologus_brichardi
ENSPVAG00000002187PABPC45686.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSPVAG00000002187PABPC410096.303ENSNLEG00000011928PABPC49996.303Nomascus_leucogenys
ENSPVAG00000002187PABPC47998.293ENSOPRG00000011984PABPC48698.293Ochotona_princeps
ENSPVAG00000002187PABPC410097.983ENSODEG00000006592-9997.983Octodon_degus
ENSPVAG00000002187PABPC49989.528ENSODEG00000017434-10089.528Octodon_degus
ENSPVAG00000002187PABPC45183.333ENSODEG00000013457-9983.333Octodon_degus
ENSPVAG00000002187PABPC410078.477ENSONIG00000008176pabpc49879.139Oreochromis_niloticus
ENSPVAG00000002187PABPC49986.532ENSOANG00000010001PABPC49986.532Ornithorhynchus_anatinus
ENSPVAG00000002187PABPC49598.589ENSOCUG00000000562PABPC48898.589Oryctolagus_cuniculus
ENSPVAG00000002187PABPC49991.120ENSORLG00000017479pabpc49791.120Oryzias_latipes
ENSPVAG00000002187PABPC49991.120ENSORLG00020018644pabpc49791.120Oryzias_latipes_hni
ENSPVAG00000002187PABPC49991.120ENSORLG00015015042pabpc49791.120Oryzias_latipes_hsok
ENSPVAG00000002187PABPC49978.655ENSOMEG00000014410pabpc49882.367Oryzias_melastigma
ENSPVAG00000002187PABPC410096.154ENSOGAG00000004067PABPC49996.154Otolemur_garnettii
ENSPVAG00000002187PABPC410098.992ENSOARG00000020060PABPC49998.992Ovis_aries
ENSPVAG00000002187PABPC410098.655ENSPPAG00000043625PABPC49998.655Pan_paniscus
ENSPVAG00000002187PABPC410099.160ENSPPRG00000024727PABPC49999.160Panthera_pardus
ENSPVAG00000002187PABPC410099.160ENSPTIG00000005829PABPC49999.160Panthera_tigris_altaica
ENSPVAG00000002187PABPC410098.655ENSPTRG00000000573PABPC49998.655Pan_troglodytes
ENSPVAG00000002187PABPC410098.992ENSPANG00000009484PABPC49998.992Papio_anubis
ENSPVAG00000002187PABPC49979.766ENSPKIG00000025356pabpc49780.435Paramormyrops_kingsleyae
ENSPVAG00000002187PABPC49987.037ENSPSIG00000016892PABPC49987.037Pelodiscus_sinensis
ENSPVAG00000002187PABPC410075.084ENSPMGG00000009073pabpc49876.510Periophthalmus_magnuspinnatus
ENSPVAG00000002187PABPC410096.471ENSPEMG00000023569-9996.471Peromyscus_maniculatus_bairdii
ENSPVAG00000002187PABPC410089.748ENSPEMG00000024193-9989.748Peromyscus_maniculatus_bairdii
ENSPVAG00000002187PABPC48867.468ENSPMAG00000002836pabpc49968.392Petromyzon_marinus
ENSPVAG00000002187PABPC49767.505ENSPMAG00000007885pabpc410067.481Petromyzon_marinus
ENSPVAG00000002187PABPC49893.404ENSPCIG00000020674PABPC49993.158Phascolarctos_cinereus
ENSPVAG00000002187PABPC410077.944ENSPFOG00000002682pabpc49879.104Poecilia_formosa
ENSPVAG00000002187PABPC410077.778ENSPLAG00000010112pabpc49878.939Poecilia_latipinna
ENSPVAG00000002187PABPC49978.415ENSPMEG00000019739pabpc49879.270Poecilia_mexicana
ENSPVAG00000002187PABPC410082.667ENSPREG00000001589pabpc49882.667Poecilia_reticulata
ENSPVAG00000002187PABPC410098.655ENSPPYG00000001506PABPC49998.655Pongo_abelii
ENSPVAG00000002187PABPC410093.950ENSPCAG00000003341PABPC49993.950Procavia_capensis
ENSPVAG00000002187PABPC410098.826ENSPCOG00000023725-9998.826Propithecus_coquereli
ENSPVAG00000002187PABPC49981.324ENSPCOG00000025882-8894.059Propithecus_coquereli
ENSPVAG00000002187PABPC410078.311ENSPNYG00000006134pabpc49878.974Pundamilia_nyererei
ENSPVAG00000002187PABPC410078.571ENSPNAG00000024355pabpc49879.236Pygocentrus_nattereri
ENSPVAG00000002187PABPC410094.790ENSRNOG00000015642Pabpc49994.790Rattus_norvegicus
ENSPVAG00000002187PABPC410092.941ENSRNOG00000028592AABR07035074.19992.941Rattus_norvegicus
ENSPVAG00000002187PABPC410098.824ENSRBIG00000039761PABPC49998.824Rhinopithecus_bieti
ENSPVAG00000002187PABPC410098.824ENSRROG00000033355PABPC49998.824Rhinopithecus_roxellana
ENSPVAG00000002187PABPC410098.655ENSSBOG00000026193PABPC49998.655Saimiri_boliviensis_boliviensis
ENSPVAG00000002187PABPC49887.457ENSSHAG00000018139PABPC49987.037Sarcophilus_harrisii
ENSPVAG00000002187PABPC49980.936ENSSFOG00015023514pabpc49980.936Scleropages_formosus
ENSPVAG00000002187PABPC49977.852ENSSMAG00000009007pabpc49778.523Scophthalmus_maximus
ENSPVAG00000002187PABPC49977.983ENSSDUG00000012683pabpc49887.568Seriola_dumerili
ENSPVAG00000002187PABPC49977.983ENSSLDG00000013025pabpc49884.715Seriola_lalandi_dorsalis
ENSPVAG00000002187PABPC410097.647ENSSARG00000000310PABPC49497.647Sorex_araneus
ENSPVAG00000002187PABPC49986.364ENSSPUG00000003204PABPC49986.195Sphenodon_punctatus
ENSPVAG00000002187PABPC49990.526ENSSPAG00000009252pabpc49890.289Stegastes_partitus
ENSPVAG00000002187PABPC49950.253ENSSSCG00000036170-9650.253Sus_scrofa
ENSPVAG00000002187PABPC410099.328ENSSSCG00000003660-9999.328Sus_scrofa
ENSPVAG00000002187PABPC49986.913ENSTGUG00000001266PABPC49986.913Taeniopygia_guttata
ENSPVAG00000002187PABPC410077.446ENSTRUG00000005907pabpc49878.109Takifugu_rubripes
ENSPVAG00000002187PABPC410074.080ENSTNIG00000016902pabpc49874.080Tetraodon_nigroviridis
ENSPVAG00000002187PABPC410087.731ENSTBEG00000009035PABPC410087.731Tupaia_belangeri
ENSPVAG00000002187PABPC410083.525ENSTTRG00000014340PABPC410087.227Tursiops_truncatus
ENSPVAG00000002187PABPC410098.824ENSUAMG00000000303PABPC49998.824Ursus_americanus
ENSPVAG00000002187PABPC410098.824ENSUMAG00000019585PABPC410098.812Ursus_maritimus
ENSPVAG00000002187PABPC47697.872ENSVPAG00000010041PABPC45997.872Vicugna_pacos
ENSPVAG00000002187PABPC410098.992ENSVVUG00000005215PABPC49998.992Vulpes_vulpes
ENSPVAG00000002187PABPC45498.058ENSXETG00000027221-9898.058Xenopus_tropicalis
ENSPVAG00000002187PABPC49977.740ENSXETG00000010946pabpc49977.740Xenopus_tropicalis
ENSPVAG00000002187PABPC410078.261ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSPVAG00000002187PABPC410078.109ENSXMAG00000019007pabpc49878.773Xiphophorus_maculatus

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