EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPVAG00000002225 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Pteropus_vampyrus
Status
putative
Strand
Minus strand
Length
18256 bases
Position
chrGeneScaffold_507:92571-110826
Accession
7330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPVAP00000002104RRM_1PF00076.225.4e-2912
ENSPVAP00000002104RRM_1PF00076.225.4e-2922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPVAT00000002225MSI1-201987-ENSPVAP00000002104328 (aa)-UPI00018B4303
Gene Model
Click here to download ENSPVAG00000002225's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000002225's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPVAG00000002225MSI16387.413ENSPVAG00000017053MSI28287.413
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPVAG00000002225MSI110082.927ENSG00000135097MSI19882.927Homo_sapiens
ENSPVAG00000002225MSI110069.207ENSAPOG00000003191MSI19469.207Acanthochromis_polyacanthus
ENSPVAG00000002225MSI110069.817ENSAPOG00000023458-9469.817Acanthochromis_polyacanthus
ENSPVAG00000002225MSI110066.842ENSAMEG00000013302MSI110066.842Ailuropoda_melanoleuca
ENSPVAG00000002225MSI19665.823ENSACIG00000017754-6488.793Amphilophus_citrinellus
ENSPVAG00000002225MSI110061.398ENSAOCG00000009031-9561.585Amphiprion_ocellaris
ENSPVAG00000002225MSI110069.207ENSAOCG00000003804MSI19469.207Amphiprion_ocellaris
ENSPVAG00000002225MSI110069.207ENSAPEG00000003245MSI19469.207Amphiprion_percula
ENSPVAG00000002225MSI18890.972ENSAPEG00000006857-6690.972Amphiprion_percula
ENSPVAG00000002225MSI110069.512ENSATEG00000017059MSI19569.512Anabas_testudineus
ENSPVAG00000002225MSI110066.970ENSATEG00000023779-9366.565Anabas_testudineus
ENSPVAG00000002225MSI110080.183ENSACAG00000002762MSI19480.183Anolis_carolinensis
ENSPVAG00000002225MSI18075.758ENSANAG00000027901-8675.758Aotus_nancymaae
ENSPVAG00000002225MSI110082.927ENSANAG00000027151MSI19882.927Aotus_nancymaae
ENSPVAG00000002225MSI110069.207ENSACLG00000000117-10069.207Astatotilapia_calliptera
ENSPVAG00000002225MSI110068.598ENSACLG00000011230MSI19468.598Astatotilapia_calliptera
ENSPVAG00000002225MSI110068.598ENSAMXG00000038960msi17668.598Astyanax_mexicanus
ENSPVAG00000002225MSI110082.927ENSBTAG00000009800MSI110082.927Bos_taurus
ENSPVAG00000002225MSI110082.927ENSCJAG00000008578MSI19882.927Callithrix_jacchus
ENSPVAG00000002225MSI110082.622ENSCAFG00000010283MSI19882.622Canis_familiaris
ENSPVAG00000002225MSI19981.994ENSCAFG00020020585MSI110081.994Canis_lupus_dingo
ENSPVAG00000002225MSI110077.612ENSCHIG00000024304MSI19877.612Capra_hircus
ENSPVAG00000002225MSI19982.875ENSTSYG00000033949MSI19582.875Carlito_syrichta
ENSPVAG00000002225MSI19979.487ENSCAPG00000003919MSI17879.487Cavia_aperea
ENSPVAG00000002225MSI110082.927ENSCPOG00000012361MSI110082.927Cavia_porcellus
ENSPVAG00000002225MSI110082.927ENSCCAG00000035567MSI19882.927Cebus_capucinus
ENSPVAG00000002225MSI110082.927ENSCATG00000030019MSI19882.927Cercocebus_atys
ENSPVAG00000002225MSI110082.927ENSCLAG00000011329MSI110082.927Chinchilla_lanigera
ENSPVAG00000002225MSI17273.251ENSCSAG00000002265MSI18973.251Chlorocebus_sabaeus
ENSPVAG00000002225MSI110078.963ENSCPBG00000011349MSI19478.963Chrysemys_picta_bellii
ENSPVAG00000002225MSI110082.927ENSCANG00000040651MSI110082.927Colobus_angolensis_palliatus
ENSPVAG00000002225MSI110082.927ENSCGRG00001018883Msi19882.927Cricetulus_griseus_chok1gshd
ENSPVAG00000002225MSI110082.927ENSCGRG00000002191Msi17282.927Cricetulus_griseus_crigri
ENSPVAG00000002225MSI110062.349ENSCSEG00000011032MSI110062.349Cynoglossus_semilaevis
ENSPVAG00000002225MSI110068.293ENSCSEG00000008352-9468.293Cynoglossus_semilaevis
ENSPVAG00000002225MSI110068.598ENSCSEG00000005834-9468.598Cynoglossus_semilaevis
ENSPVAG00000002225MSI17060.173ENSCVAG00000017463-8960.173Cyprinodon_variegatus
ENSPVAG00000002225MSI110069.817ENSCVAG00000009100MSI19469.817Cyprinodon_variegatus
ENSPVAG00000002225MSI18859.825ENSDARG00000102015CABZ01037298.18959.825Danio_rerio
ENSPVAG00000002225MSI110066.463ENSDARG00000010710msi19966.463Danio_rerio
ENSPVAG00000002225MSI110072.866ENSDNOG00000005713MSI19172.866Dasypus_novemcinctus
ENSPVAG00000002225MSI110082.927ENSDORG00000005610Msi19382.927Dipodomys_ordii
ENSPVAG00000002225MSI110078.659ENSETEG00000004756MSI110078.659Echinops_telfairi
ENSPVAG00000002225MSI110082.927ENSEASG00005004736MSI19882.927Equus_asinus_asinus
ENSPVAG00000002225MSI110082.927ENSECAG00000017526MSI19882.927Equus_caballus
ENSPVAG00000002225MSI18888.889ENSELUG00000023219MSI18088.889Esox_lucius
ENSPVAG00000002225MSI110065.854ENSELUG00000023280-10065.549Esox_lucius
ENSPVAG00000002225MSI110082.927ENSFCAG00000011007MSI19882.927Felis_catus
ENSPVAG00000002225MSI19978.135ENSFALG00000007574MSI110078.135Ficedula_albicollis
ENSPVAG00000002225MSI110082.927ENSFDAG00000019586MSI110082.927Fukomys_damarensis
ENSPVAG00000002225MSI110069.512ENSFHEG00000003560-9469.512Fundulus_heteroclitus
ENSPVAG00000002225MSI110070.122ENSFHEG00000022446MSI19470.122Fundulus_heteroclitus
ENSPVAG00000002225MSI110060.671ENSGMOG00000017838-9060.671Gadus_morhua
ENSPVAG00000002225MSI110067.378ENSGMOG00000001006MSI19467.073Gadus_morhua
ENSPVAG00000002225MSI19975.092ENSGALG00000007227MSI19670.868Gallus_gallus
ENSPVAG00000002225MSI18877.982ENSGAFG00000005860-6977.982Gambusia_affinis
ENSPVAG00000002225MSI110068.902ENSGAFG00000021522MSI18589.062Gambusia_affinis
ENSPVAG00000002225MSI110064.939ENSGACG00000008674-9464.939Gasterosteus_aculeatus
ENSPVAG00000002225MSI110068.598ENSGACG00000012679MSI19468.598Gasterosteus_aculeatus
ENSPVAG00000002225MSI110078.963ENSGAGG00000016037MSI19478.963Gopherus_agassizii
ENSPVAG00000002225MSI19982.166ENSGGOG00000010328MSI110082.166Gorilla_gorilla
ENSPVAG00000002225MSI110069.207ENSHBUG00000011841-9469.207Haplochromis_burtoni
ENSPVAG00000002225MSI110068.598ENSHBUG00000021921MSI19468.598Haplochromis_burtoni
ENSPVAG00000002225MSI110082.927ENSHGLG00000012782MSI19882.927Heterocephalus_glaber_female
ENSPVAG00000002225MSI110082.927ENSHGLG00100016848MSI110082.927Heterocephalus_glaber_male
ENSPVAG00000002225MSI110068.293ENSHCOG00000012067-7790.598Hippocampus_comes
ENSPVAG00000002225MSI110064.939ENSHCOG00000012019MSI110064.939Hippocampus_comes
ENSPVAG00000002225MSI110068.293ENSIPUG00000001976msi19964.939Ictalurus_punctatus
ENSPVAG00000002225MSI19981.994ENSSTOG00000009799MSI110081.994Ictidomys_tridecemlineatus
ENSPVAG00000002225MSI110082.927ENSJJAG00000010463Msi19882.927Jaculus_jaculus
ENSPVAG00000002225MSI110067.378ENSJJAG00000010643-9467.378Jaculus_jaculus
ENSPVAG00000002225MSI110068.902ENSKMAG00000011251MSI19468.902Kryptolebias_marmoratus
ENSPVAG00000002225MSI110067.073ENSKMAG00000019877-10067.073Kryptolebias_marmoratus
ENSPVAG00000002225MSI110069.207ENSLBEG00000008789MSI19469.207Labrus_bergylta
ENSPVAG00000002225MSI110068.598ENSLBEG00000001375-9468.598Labrus_bergylta
ENSPVAG00000002225MSI110071.646ENSLACG00000018287MSI110071.646Latimeria_chalumnae
ENSPVAG00000002225MSI110073.860ENSLAFG00000009412MSI110073.860Loxodonta_africana
ENSPVAG00000002225MSI110082.927ENSMFAG00000001798MSI110082.927Macaca_fascicularis
ENSPVAG00000002225MSI110082.927ENSMMUG00000031527MSI19682.927Macaca_mulatta
ENSPVAG00000002225MSI110082.927ENSMNEG00000040034MSI19882.927Macaca_nemestrina
ENSPVAG00000002225MSI110082.927ENSMLEG00000003921MSI110082.927Mandrillus_leucophaeus
ENSPVAG00000002225MSI110068.598ENSMAMG00000002279MSI19468.598Mastacembelus_armatus
ENSPVAG00000002225MSI110069.207ENSMAMG00000018426-9469.207Mastacembelus_armatus
ENSPVAG00000002225MSI110068.598ENSMZEG00005026892MSI19468.598Maylandia_zebra
ENSPVAG00000002225MSI110069.207ENSMZEG00005000340-9469.207Maylandia_zebra
ENSPVAG00000002225MSI16073.750ENSMGAG00000016518-9573.750Meleagris_gallopavo
ENSPVAG00000002225MSI17075.983ENSMAUG00000016820Msi110075.983Mesocricetus_auratus
ENSPVAG00000002225MSI110082.927ENSMICG00000033181MSI19882.927Microcebus_murinus
ENSPVAG00000002225MSI110082.622ENSMOCG00000002286Msi19882.622Microtus_ochrogaster
ENSPVAG00000002225MSI110066.159ENSMMOG00000012265-9966.159Mola_mola
ENSPVAG00000002225MSI110059.451ENSMMOG00000010492MSI19284.848Mola_mola
ENSPVAG00000002225MSI110061.027ENSMODG00000003189-10061.027Monodelphis_domestica
ENSPVAG00000002225MSI110069.207ENSMALG00000017889MSI19469.207Monopterus_albus
ENSPVAG00000002225MSI110068.293ENSMALG00000001426-10068.293Monopterus_albus
ENSPVAG00000002225MSI110082.317MGP_CAROLIEiJ_G0027626Msi19882.317Mus_caroli
ENSPVAG00000002225MSI110082.317ENSMUSG00000054256Msi19882.317Mus_musculus
ENSPVAG00000002225MSI110082.012MGP_PahariEiJ_G0024206Msi19882.012Mus_pahari
ENSPVAG00000002225MSI110082.317MGP_SPRETEiJ_G0028624Msi19882.317Mus_spretus
ENSPVAG00000002225MSI19981.994ENSMPUG00000003168MSI110081.994Mustela_putorius_furo
ENSPVAG00000002225MSI110074.551ENSMLUG00000010313MSI110074.551Myotis_lucifugus
ENSPVAG00000002225MSI110082.927ENSNGAG00000014508Msi19382.927Nannospalax_galili
ENSPVAG00000002225MSI110069.207ENSNBRG00000000841-9469.207Neolamprologus_brichardi
ENSPVAG00000002225MSI19756.809ENSNBRG00000018012MSI19956.809Neolamprologus_brichardi
ENSPVAG00000002225MSI18899.107ENSNLEG00000015636MSI18699.107Nomascus_leucogenys
ENSPVAG00000002225MSI110085.366ENSMEUG00000015759MSI110085.366Notamacropus_eugenii
ENSPVAG00000002225MSI18499.174ENSOPRG00000016879MSI18699.174Ochotona_princeps
ENSPVAG00000002225MSI110082.927ENSODEG00000006328MSI110082.927Octodon_degus
ENSPVAG00000002225MSI110068.902ENSONIG00000019452-9468.902Oreochromis_niloticus
ENSPVAG00000002225MSI19786.154ENSONIG00000011182MSI19469.207Oreochromis_niloticus
ENSPVAG00000002225MSI19981.672ENSOCUG00000027716MSI110081.672Oryctolagus_cuniculus
ENSPVAG00000002225MSI110069.512ENSORLG00000029593MSI19469.512Oryzias_latipes
ENSPVAG00000002225MSI110069.817ENSORLG00000019978-9469.817Oryzias_latipes
ENSPVAG00000002225MSI110069.817ENSORLG00020001208-6769.817Oryzias_latipes_hni
ENSPVAG00000002225MSI110069.512ENSORLG00020008266MSI19966.768Oryzias_latipes_hni
ENSPVAG00000002225MSI110069.512ENSORLG00015003916MSI19966.768Oryzias_latipes_hsok
ENSPVAG00000002225MSI110069.817ENSORLG00015013672-7166.566Oryzias_latipes_hsok
ENSPVAG00000002225MSI110070.122ENSOMEG00000002272-9770.122Oryzias_melastigma
ENSPVAG00000002225MSI110069.817ENSOMEG00000017536MSI110067.073Oryzias_melastigma
ENSPVAG00000002225MSI110082.175ENSOGAG00000003847MSI19882.175Otolemur_garnettii
ENSPVAG00000002225MSI110079.027ENSOARG00000012097MSI110079.027Ovis_aries
ENSPVAG00000002225MSI110082.927ENSPPAG00000043073MSI110082.927Pan_paniscus
ENSPVAG00000002225MSI110082.927ENSPPRG00000000370MSI19882.927Panthera_pardus
ENSPVAG00000002225MSI19981.994ENSPTIG00000008913MSI110081.994Panthera_tigris_altaica
ENSPVAG00000002225MSI110082.927ENSPTRG00000005531MSI19882.927Pan_troglodytes
ENSPVAG00000002225MSI110082.622ENSPANG00000006335MSI19882.622Papio_anubis
ENSPVAG00000002225MSI110069.817ENSPKIG00000023575-9469.817Paramormyrops_kingsleyae
ENSPVAG00000002225MSI110069.817ENSPKIG00000016497MSI19469.817Paramormyrops_kingsleyae
ENSPVAG00000002225MSI18868.122ENSPSIG00000009621-10068.122Pelodiscus_sinensis
ENSPVAG00000002225MSI110075.000ENSPSIG00000011608-9375.000Pelodiscus_sinensis
ENSPVAG00000002225MSI18086.806ENSPMGG00000007743-7686.806Periophthalmus_magnuspinnatus
ENSPVAG00000002225MSI19665.204ENSPMGG00000000514MSI19765.204Periophthalmus_magnuspinnatus
ENSPVAG00000002225MSI110082.622ENSPEMG00000010491Msi19382.622Peromyscus_maniculatus_bairdii
ENSPVAG00000002225MSI110069.817ENSPFOG00000013113MSI19469.817Poecilia_formosa
ENSPVAG00000002225MSI110069.512ENSPFOG00000008319-8169.512Poecilia_formosa
ENSPVAG00000002225MSI110069.512ENSPLAG00000012431-9169.512Poecilia_latipinna
ENSPVAG00000002225MSI110069.817ENSPLAG00000014025-9469.817Poecilia_latipinna
ENSPVAG00000002225MSI110069.817ENSPMEG00000012796MSI19469.817Poecilia_mexicana
ENSPVAG00000002225MSI110068.902ENSPMEG00000007025-9361.280Poecilia_mexicana
ENSPVAG00000002225MSI16856.579ENSPREG00000014574-10056.579Poecilia_reticulata
ENSPVAG00000002225MSI110067.173ENSPREG00000021416-9467.173Poecilia_reticulata
ENSPVAG00000002225MSI110082.927ENSPPYG00000005027MSI19882.927Pongo_abelii
ENSPVAG00000002225MSI17772.081ENSPCAG00000002300MSI17272.081Procavia_capensis
ENSPVAG00000002225MSI110082.927ENSPCOG00000017341MSI19882.927Propithecus_coquereli
ENSPVAG00000002225MSI110069.207ENSPNYG00000002529-9469.207Pundamilia_nyererei
ENSPVAG00000002225MSI110068.598ENSPNYG00000004379MSI19468.598Pundamilia_nyererei
ENSPVAG00000002225MSI110068.293ENSPNAG00000019337msi19468.293Pygocentrus_nattereri
ENSPVAG00000002225MSI19981.672ENSRNOG00000001156Msi110081.672Rattus_norvegicus
ENSPVAG00000002225MSI110082.927ENSRBIG00000036889MSI110081.994Rhinopithecus_bieti
ENSPVAG00000002225MSI110082.927ENSRROG00000041076MSI19382.927Rhinopithecus_roxellana
ENSPVAG00000002225MSI110082.927ENSSBOG00000030259MSI19882.927Saimiri_boliviensis_boliviensis
ENSPVAG00000002225MSI19979.085ENSSHAG00000006834MSI110079.085Sarcophilus_harrisii
ENSPVAG00000002225MSI110071.646ENSSFOG00015005350MSI110067.683Scleropages_formosus
ENSPVAG00000002225MSI110069.817ENSSFOG00015014964-9569.817Scleropages_formosus
ENSPVAG00000002225MSI19966.545ENSSMAG00000009156-7166.545Scophthalmus_maximus
ENSPVAG00000002225MSI110066.566ENSSMAG00000018824MSI19766.566Scophthalmus_maximus
ENSPVAG00000002225MSI110068.902ENSSDUG00000022697-9468.902Seriola_dumerili
ENSPVAG00000002225MSI110069.512ENSSDUG00000001027MSI19469.512Seriola_dumerili
ENSPVAG00000002225MSI110069.512ENSSLDG00000016832MSI19469.512Seriola_lalandi_dorsalis
ENSPVAG00000002225MSI110065.549ENSSLDG00000018706-9666.869Seriola_lalandi_dorsalis
ENSPVAG00000002225MSI110078.659ENSSPUG00000015741MSI110078.659Sphenodon_punctatus
ENSPVAG00000002225MSI110069.512ENSSPAG00000013098-10069.512Stegastes_partitus
ENSPVAG00000002225MSI110082.622ENSSSCG00000029365MSI110081.672Sus_scrofa
ENSPVAG00000002225MSI110079.878ENSTGUG00000009534MSI110079.878Taeniopygia_guttata
ENSPVAG00000002225MSI16389.583ENSTRUG00000015636-7953.333Takifugu_rubripes
ENSPVAG00000002225MSI19059.307ENSTRUG00000016249MSI110055.056Takifugu_rubripes
ENSPVAG00000002225MSI110064.350ENSTNIG00000011469MSI19464.350Tetraodon_nigroviridis
ENSPVAG00000002225MSI110054.252ENSTNIG00000019814-9554.252Tetraodon_nigroviridis
ENSPVAG00000002225MSI19971.429ENSTBEG00000007182MSI110071.429Tupaia_belangeri
ENSPVAG00000002225MSI110064.024ENSTTRG00000005663MSI110064.024Tursiops_truncatus
ENSPVAG00000002225MSI16077.222ENSUAMG00000015514MSI163100.000Ursus_americanus
ENSPVAG00000002225MSI19975.000ENSUMAG00000006176MSI19075.000Ursus_maritimus
ENSPVAG00000002225MSI110082.927ENSVVUG00000020993MSI110082.927Vulpes_vulpes
ENSPVAG00000002225MSI110075.988ENSXETG00000012216msi19575.988Xenopus_tropicalis
ENSPVAG00000002225MSI110055.623ENSXCOG00000017605MSI18955.623Xiphophorus_couchianus
ENSPVAG00000002225MSI110069.817ENSXMAG00000027103MSI19563.664Xiphophorus_maculatus
ENSPVAG00000002225MSI110069.207ENSXMAG00000018237-9469.207Xiphophorus_maculatus

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