EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000002380 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 14215 bases
Position: chrGeneScaffold_586:1533-15747
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000002248	RtcB	PF01139.17	1.3e-131	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000002381	RTCB-201	1404	-	ENSPVAP00000002248	468 (aa)	-	UPI00018B4CFF

Gene Model

Click here to download ENSPVAG00000002380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000002380's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000002380	RTCB	100	98.936	ENSG00000100220	RTCB	93	98.936	Homo_sapiens
ENSPVAG00000002380	RTCB	100	93.617	ENSAPOG00000006040	rtcb	93	93.617	Acanthochromis_polyacanthus
ENSPVAG00000002380	RTCB	100	98.723	ENSAMEG00000016152	RTCB	93	98.723	Ailuropoda_melanoleuca
ENSPVAG00000002380	RTCB	100	88.889	ENSACIG00000009083	rtcb	93	88.889	Amphilophus_citrinellus
ENSPVAG00000002380	RTCB	100	93.830	ENSAOCG00000005662	rtcb	93	93.830	Amphiprion_ocellaris
ENSPVAG00000002380	RTCB	100	93.830	ENSAPEG00000024701	rtcb	93	93.830	Amphiprion_percula
ENSPVAG00000002380	RTCB	96	92.699	ENSAPEG00000024653	rtcb	95	92.699	Amphiprion_percula
ENSPVAG00000002380	RTCB	100	93.617	ENSATEG00000000618	rtcb	93	93.617	Anabas_testudineus
ENSPVAG00000002380	RTCB	100	92.769	ENSACAG00000014817	RTCB	93	92.769	Anolis_carolinensis
ENSPVAG00000002380	RTCB	100	82.979	ENSANAG00000018191	-	85	82.979	Aotus_nancymaae
ENSPVAG00000002380	RTCB	70	83.939	ENSANAG00000023724	-	75	83.939	Aotus_nancymaae
ENSPVAG00000002380	RTCB	100	92.340	ENSACLG00000008367	rtcb	92	93.412	Astatotilapia_calliptera
ENSPVAG00000002380	RTCB	100	93.617	ENSAMXG00000042320	rtcb	93	93.617	Astyanax_mexicanus
ENSPVAG00000002380	RTCB	100	98.511	ENSBTAG00000011070	RTCB	93	98.511	Bos_taurus
ENSPVAG00000002380	RTCB	100	71.277	WBGene00008877	rtcb-1	93	71.277	Caenorhabditis_elegans
ENSPVAG00000002380	RTCB	100	98.936	ENSCJAG00000006128	RTCB	93	98.936	Callithrix_jacchus
ENSPVAG00000002380	RTCB	100	94.468	ENSCAFG00000010789	-	93	94.468	Canis_familiaris
ENSPVAG00000002380	RTCB	100	98.723	ENSCAFG00000001785	RTCB	93	98.723	Canis_familiaris
ENSPVAG00000002380	RTCB	94	95.000	ENSCAFG00020018953	-	99	95.000	Canis_lupus_dingo
ENSPVAG00000002380	RTCB	100	98.723	ENSCAFG00020004890	-	93	98.723	Canis_lupus_dingo
ENSPVAG00000002380	RTCB	100	98.723	ENSCHIG00000027009	-	93	98.723	Capra_hircus
ENSPVAG00000002380	RTCB	100	98.511	ENSTSYG00000012320	RTCB	93	98.511	Carlito_syrichta
ENSPVAG00000002380	RTCB	94	98.190	ENSCAPG00000011647	RTCB	89	98.190	Cavia_aperea
ENSPVAG00000002380	RTCB	100	98.936	ENSCCAG00000000618	RTCB	93	98.936	Cebus_capucinus
ENSPVAG00000002380	RTCB	100	98.511	ENSCATG00000033424	RTCB	93	98.511	Cercocebus_atys
ENSPVAG00000002380	RTCB	100	98.298	ENSCLAG00000007997	RTCB	93	98.298	Chinchilla_lanigera
ENSPVAG00000002380	RTCB	100	98.723	ENSCSAG00000008351	RTCB	93	98.723	Chlorocebus_sabaeus
ENSPVAG00000002380	RTCB	100	83.830	ENSCHOG00000009123	RTCB	93	83.830	Choloepus_hoffmanni
ENSPVAG00000002380	RTCB	100	95.532	ENSCPBG00000023184	RTCB	93	95.532	Chrysemys_picta_bellii
ENSPVAG00000002380	RTCB	100	81.237	ENSCING00000003830	-	93	81.237	Ciona_intestinalis
ENSPVAG00000002380	RTCB	100	81.450	ENSCSAVG00000008124	-	92	81.450	Ciona_savignyi
ENSPVAG00000002380	RTCB	100	98.511	ENSCANG00000001891	RTCB	97	98.511	Colobus_angolensis_palliatus
ENSPVAG00000002380	RTCB	100	98.298	ENSCGRG00001011173	Rtcb	93	98.298	Cricetulus_griseus_chok1gshd
ENSPVAG00000002380	RTCB	93	98.624	ENSCGRG00000009587	-	89	98.624	Cricetulus_griseus_crigri
ENSPVAG00000002380	RTCB	100	92.979	ENSCSEG00000003986	rtcb	93	92.979	Cynoglossus_semilaevis
ENSPVAG00000002380	RTCB	87	95.309	ENSCVAG00000000569	rtcb	92	95.309	Cyprinodon_variegatus
ENSPVAG00000002380	RTCB	100	92.979	ENSDARG00000101047	rtcb	93	92.979	Danio_rerio
ENSPVAG00000002380	RTCB	86	96.069	ENSDNOG00000012425	RTCB	99	96.069	Dasypus_novemcinctus
ENSPVAG00000002380	RTCB	100	97.872	ENSDORG00000010855	Rtcb	93	97.872	Dipodomys_ordii
ENSPVAG00000002380	RTCB	99	84.829	FBgn0032781	RtcB	92	84.829	Drosophila_melanogaster
ENSPVAG00000002380	RTCB	100	91.489	ENSETEG00000001988	RTCB	93	91.489	Echinops_telfairi
ENSPVAG00000002380	RTCB	100	84.255	ENSEBUG00000014235	rtcb	93	84.255	Eptatretus_burgeri
ENSPVAG00000002380	RTCB	100	98.723	ENSEASG00005019059	RTCB	93	98.723	Equus_asinus_asinus
ENSPVAG00000002380	RTCB	100	98.723	ENSECAG00000023998	RTCB	93	98.723	Equus_caballus
ENSPVAG00000002380	RTCB	79	98.649	ENSEEUG00000006251	RTCB	83	98.649	Erinaceus_europaeus
ENSPVAG00000002380	RTCB	100	81.174	ENSELUG00000009275	rtcb	93	81.174	Esox_lucius
ENSPVAG00000002380	RTCB	100	98.936	ENSFCAG00000026480	RTCB	93	98.936	Felis_catus
ENSPVAG00000002380	RTCB	100	96.596	ENSFALG00000013334	RTCB	93	96.596	Ficedula_albicollis
ENSPVAG00000002380	RTCB	100	98.723	ENSFDAG00000018150	RTCB	93	98.723	Fukomys_damarensis
ENSPVAG00000002380	RTCB	100	93.191	ENSFHEG00000009595	rtcb	93	93.191	Fundulus_heteroclitus
ENSPVAG00000002380	RTCB	100	90.851	ENSGMOG00000018882	rtcb	93	90.851	Gadus_morhua
ENSPVAG00000002380	RTCB	100	96.383	ENSGALG00000012611	RTCB	93	96.383	Gallus_gallus
ENSPVAG00000002380	RTCB	100	93.617	ENSGAFG00000004198	rtcb	93	93.617	Gambusia_affinis
ENSPVAG00000002380	RTCB	100	92.979	ENSGACG00000000586	rtcb	93	92.979	Gasterosteus_aculeatus
ENSPVAG00000002380	RTCB	100	94.894	ENSGAGG00000019133	RTCB	98	94.894	Gopherus_agassizii
ENSPVAG00000002380	RTCB	100	98.936	ENSGGOG00000011402	RTCB	93	98.936	Gorilla_gorilla
ENSPVAG00000002380	RTCB	100	92.340	ENSHBUG00000020571	rtcb	93	92.340	Haplochromis_burtoni
ENSPVAG00000002380	RTCB	100	98.723	ENSHGLG00000004492	RTCB	93	98.723	Heterocephalus_glaber_female
ENSPVAG00000002380	RTCB	93	69.108	ENSHGLG00000001066	-	91	69.108	Heterocephalus_glaber_female
ENSPVAG00000002380	RTCB	100	98.723	ENSHGLG00100008965	RTCB	93	98.723	Heterocephalus_glaber_male
ENSPVAG00000002380	RTCB	100	91.102	ENSHCOG00000006450	rtcb	93	91.102	Hippocampus_comes
ENSPVAG00000002380	RTCB	100	93.617	ENSIPUG00000015443	rtcb	93	93.617	Ictalurus_punctatus
ENSPVAG00000002380	RTCB	100	98.723	ENSSTOG00000003878	RTCB	93	98.723	Ictidomys_tridecemlineatus
ENSPVAG00000002380	RTCB	100	98.511	ENSJJAG00000010667	Rtcb	93	98.511	Jaculus_jaculus
ENSPVAG00000002380	RTCB	100	93.191	ENSKMAG00000013178	rtcb	93	93.191	Kryptolebias_marmoratus
ENSPVAG00000002380	RTCB	100	93.617	ENSLBEG00000010566	RTCB	93	93.617	Labrus_bergylta
ENSPVAG00000002380	RTCB	100	92.553	ENSLBEG00000000214	rtcb	93	92.553	Labrus_bergylta
ENSPVAG00000002380	RTCB	100	94.255	ENSLACG00000013033	RTCB	93	94.255	Latimeria_chalumnae
ENSPVAG00000002380	RTCB	100	93.830	ENSLOCG00000016515	rtcb	93	93.830	Lepisosteus_oculatus
ENSPVAG00000002380	RTCB	100	98.298	ENSLAFG00000002082	RTCB	93	98.298	Loxodonta_africana
ENSPVAG00000002380	RTCB	100	98.723	ENSMFAG00000034419	RTCB	93	98.723	Macaca_fascicularis
ENSPVAG00000002380	RTCB	100	98.723	ENSMMUG00000006720	RTCB	93	98.723	Macaca_mulatta
ENSPVAG00000002380	RTCB	100	98.723	ENSMNEG00000040669	RTCB	93	98.723	Macaca_nemestrina
ENSPVAG00000002380	RTCB	100	98.511	ENSMLEG00000040505	RTCB	93	98.511	Mandrillus_leucophaeus
ENSPVAG00000002380	RTCB	100	93.191	ENSMAMG00000020676	rtcb	93	93.191	Mastacembelus_armatus
ENSPVAG00000002380	RTCB	100	92.340	ENSMZEG00005018942	rtcb	93	92.340	Maylandia_zebra
ENSPVAG00000002380	RTCB	100	95.975	ENSMGAG00000012805	RTCB	93	95.975	Meleagris_gallopavo
ENSPVAG00000002380	RTCB	56	100.000	ENSMAUG00000008301	Rtcb	88	100.000	Mesocricetus_auratus
ENSPVAG00000002380	RTCB	100	99.149	ENSMICG00000013303	-	93	99.149	Microcebus_murinus
ENSPVAG00000002380	RTCB	100	78.511	ENSMICG00000036677	-	92	78.511	Microcebus_murinus
ENSPVAG00000002380	RTCB	100	98.298	ENSMOCG00000002440	Rtcb	93	98.298	Microtus_ochrogaster
ENSPVAG00000002380	RTCB	100	93.830	ENSMMOG00000005987	rtcb	93	93.830	Mola_mola
ENSPVAG00000002380	RTCB	100	97.234	ENSMODG00000001414	RTCB	93	97.234	Monodelphis_domestica
ENSPVAG00000002380	RTCB	100	94.043	ENSMALG00000007603	rtcb	93	94.043	Monopterus_albus
ENSPVAG00000002380	RTCB	100	98.723	MGP_CAROLIEiJ_G0015689	Rtcb	93	98.723	Mus_caroli
ENSPVAG00000002380	RTCB	100	98.723	ENSMUSG00000001783	Rtcb	93	98.723	Mus_musculus
ENSPVAG00000002380	RTCB	100	98.723	MGP_PahariEiJ_G0031396	Rtcb	93	98.723	Mus_pahari
ENSPVAG00000002380	RTCB	100	98.723	MGP_SPRETEiJ_G0016507	Rtcb	93	98.723	Mus_spretus
ENSPVAG00000002380	RTCB	100	98.723	ENSMPUG00000012285	RTCB	93	98.723	Mustela_putorius_furo
ENSPVAG00000002380	RTCB	100	97.034	ENSMLUG00000007803	RTCB	93	97.034	Myotis_lucifugus
ENSPVAG00000002380	RTCB	73	100.000	ENSNGAG00000005093	Rtcb	90	100.000	Nannospalax_galili
ENSPVAG00000002380	RTCB	100	92.553	ENSNBRG00000017202	rtcb	93	92.553	Neolamprologus_brichardi
ENSPVAG00000002380	RTCB	100	98.936	ENSNLEG00000004960	RTCB	93	98.936	Nomascus_leucogenys
ENSPVAG00000002380	RTCB	88	91.228	ENSMEUG00000007809	-	82	91.228	Notamacropus_eugenii
ENSPVAG00000002380	RTCB	78	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSPVAG00000002380	RTCB	81	100.000	ENSODEG00000013033	-	91	100.000	Octodon_degus
ENSPVAG00000002380	RTCB	99	64.103	ENSODEG00000005042	-	91	64.103	Octodon_degus
ENSPVAG00000002380	RTCB	100	93.617	ENSONIG00000007474	rtcb	93	93.617	Oreochromis_niloticus
ENSPVAG00000002380	RTCB	100	97.234	ENSOANG00000005524	RTCB	93	97.234	Ornithorhynchus_anatinus
ENSPVAG00000002380	RTCB	100	98.511	ENSOCUG00000008270	RTCB	96	98.511	Oryctolagus_cuniculus
ENSPVAG00000002380	RTCB	100	92.766	ENSORLG00000020093	rtcb	93	92.766	Oryzias_latipes
ENSPVAG00000002380	RTCB	100	92.766	ENSORLG00020003706	rtcb	93	92.766	Oryzias_latipes_hni
ENSPVAG00000002380	RTCB	100	92.979	ENSORLG00015002968	rtcb	93	92.979	Oryzias_latipes_hsok
ENSPVAG00000002380	RTCB	100	92.553	ENSOMEG00000021278	rtcb	93	92.553	Oryzias_melastigma
ENSPVAG00000002380	RTCB	100	98.723	ENSOGAG00000001425	RTCB	93	98.723	Otolemur_garnettii
ENSPVAG00000002380	RTCB	100	98.723	ENSOARG00000018008	RTCB	93	98.723	Ovis_aries
ENSPVAG00000002380	RTCB	100	98.936	ENSPPAG00000028667	RTCB	93	98.936	Pan_paniscus
ENSPVAG00000002380	RTCB	100	98.936	ENSPPRG00000004038	RTCB	93	98.936	Panthera_pardus
ENSPVAG00000002380	RTCB	94	95.227	ENSPTIG00000020499	RTCB	90	95.227	Panthera_tigris_altaica
ENSPVAG00000002380	RTCB	100	98.936	ENSPTRG00000014287	RTCB	93	98.936	Pan_troglodytes
ENSPVAG00000002380	RTCB	100	98.723	ENSPANG00000016035	RTCB	93	98.723	Papio_anubis
ENSPVAG00000002380	RTCB	100	91.915	ENSPKIG00000001881	rtcb	93	91.915	Paramormyrops_kingsleyae
ENSPVAG00000002380	RTCB	90	97.176	ENSPSIG00000011690	RTCB	92	97.176	Pelodiscus_sinensis
ENSPVAG00000002380	RTCB	100	93.404	ENSPMGG00000016672	rtcb	93	93.404	Periophthalmus_magnuspinnatus
ENSPVAG00000002380	RTCB	100	98.723	ENSPEMG00000019548	Rtcb	93	98.723	Peromyscus_maniculatus_bairdii
ENSPVAG00000002380	RTCB	100	90.426	ENSPMAG00000005657	rtcb	93	90.426	Petromyzon_marinus
ENSPVAG00000002380	RTCB	100	97.660	ENSPCIG00000009467	RTCB	93	97.660	Phascolarctos_cinereus
ENSPVAG00000002380	RTCB	100	94.043	ENSPFOG00000003058	rtcb	93	94.043	Poecilia_formosa
ENSPVAG00000002380	RTCB	100	93.830	ENSPLAG00000017663	rtcb	93	93.830	Poecilia_latipinna
ENSPVAG00000002380	RTCB	100	94.043	ENSPMEG00000006227	rtcb	93	94.043	Poecilia_mexicana
ENSPVAG00000002380	RTCB	100	93.830	ENSPREG00000018467	rtcb	93	93.830	Poecilia_reticulata
ENSPVAG00000002380	RTCB	100	98.936	ENSPPYG00000011752	RTCB	93	98.936	Pongo_abelii
ENSPVAG00000002380	RTCB	100	80.932	ENSPCAG00000013641	RTCB	100	80.932	Procavia_capensis
ENSPVAG00000002380	RTCB	100	98.936	ENSPCOG00000017243	RTCB	93	98.936	Propithecus_coquereli
ENSPVAG00000002380	RTCB	100	92.340	ENSPNYG00000022760	rtcb	93	92.340	Pundamilia_nyererei
ENSPVAG00000002380	RTCB	100	94.255	ENSPNAG00000009209	rtcb	93	94.255	Pygocentrus_nattereri
ENSPVAG00000002380	RTCB	100	98.723	ENSRNOG00000004813	Rtcb	93	98.723	Rattus_norvegicus
ENSPVAG00000002380	RTCB	100	88.960	ENSRBIG00000042090	RTCB	93	88.960	Rhinopithecus_bieti
ENSPVAG00000002380	RTCB	100	94.255	ENSSBOG00000020085	-	93	94.255	Saimiri_boliviensis_boliviensis
ENSPVAG00000002380	RTCB	93	98.633	ENSSHAG00000016277	RTCB	93	98.633	Sarcophilus_harrisii
ENSPVAG00000002380	RTCB	100	92.766	ENSSFOG00015011572	RTCB	93	92.766	Scleropages_formosus
ENSPVAG00000002380	RTCB	100	92.340	ENSSFOG00015000763	rtcb	93	92.340	Scleropages_formosus
ENSPVAG00000002380	RTCB	100	91.064	ENSSMAG00000005096	rtcb	93	89.149	Scophthalmus_maximus
ENSPVAG00000002380	RTCB	100	92.553	ENSSDUG00000012605	rtcb	93	92.553	Seriola_dumerili
ENSPVAG00000002380	RTCB	100	92.553	ENSSLDG00000019458	rtcb	93	92.553	Seriola_lalandi_dorsalis
ENSPVAG00000002380	RTCB	63	73.244	ENSSARG00000004799	-	63	73.244	Sorex_araneus
ENSPVAG00000002380	RTCB	100	95.532	ENSSPUG00000012814	RTCB	93	95.532	Sphenodon_punctatus
ENSPVAG00000002380	RTCB	100	93.830	ENSSPAG00000004623	rtcb	93	93.830	Stegastes_partitus
ENSPVAG00000002380	RTCB	100	98.936	ENSSSCG00000000158	RTCB	93	98.936	Sus_scrofa
ENSPVAG00000002380	RTCB	100	96.596	ENSTGUG00000010947	RTCB	93	96.596	Taeniopygia_guttata
ENSPVAG00000002380	RTCB	90	94.575	ENSTRUG00000009880	rtcb	100	92.121	Takifugu_rubripes
ENSPVAG00000002380	RTCB	100	92.979	ENSTNIG00000002484	rtcb	93	92.979	Tetraodon_nigroviridis
ENSPVAG00000002380	RTCB	100	84.043	ENSTBEG00000004418	RTCB	93	84.043	Tupaia_belangeri
ENSPVAG00000002380	RTCB	100	97.872	ENSTTRG00000006417	RTCB	100	97.872	Tursiops_truncatus
ENSPVAG00000002380	RTCB	100	98.723	ENSUAMG00000022792	RTCB	93	98.723	Ursus_americanus
ENSPVAG00000002380	RTCB	100	98.723	ENSUMAG00000017225	RTCB	93	98.723	Ursus_maritimus
ENSPVAG00000002380	RTCB	100	98.936	ENSVPAG00000005375	RTCB	93	98.936	Vicugna_pacos
ENSPVAG00000002380	RTCB	100	98.723	ENSVVUG00000023408	RTCB	93	98.723	Vulpes_vulpes
ENSPVAG00000002380	RTCB	100	93.191	ENSXETG00000011523	rtcb	93	93.191	Xenopus_tropicalis
ENSPVAG00000002380	RTCB	100	94.043	ENSXMAG00000002855	rtcb	93	94.043	Xiphophorus_maculatus