EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000002547 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 133966 bases
Position: chrGeneScaffold_1858:24241-158206
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000002409	R3H	PF01424.22	2e-05	1	1
ENSPVAP00000002409	RNA_bind	PF08675.11	4e-32	1	1
ENSPVAP00000002409	CAF1	PF04857.20	1.4e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000002548	PARN-201	1893	-	ENSPVAP00000002409	630 (aa)	-	UPI00018B35C3

Gene Model

Click here to download ENSPVAG00000002547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000002547's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000002547	PARN	100	89.715	ENSG00000140694	PARN	98	98.077	Homo_sapiens
ENSPVAG00000002547	PARN	100	89.557	ENSAMEG00000011208	PARN	99	89.557	Ailuropoda_melanoleuca
ENSPVAG00000002547	PARN	83	72.401	ENSACIG00000000619	parn	82	72.401	Amphilophus_citrinellus
ENSPVAG00000002547	PARN	91	71.478	ENSAOCG00000003465	parn	81	71.478	Amphiprion_ocellaris
ENSPVAG00000002547	PARN	74	75.264	ENSAPEG00000010661	parn	91	75.264	Amphiprion_percula
ENSPVAG00000002547	PARN	99	65.839	ENSATEG00000004661	parn	87	67.974	Anabas_testudineus
ENSPVAG00000002547	PARN	100	80.349	ENSAPLG00000013914	PARN	99	80.349	Anas_platyrhynchos
ENSPVAG00000002547	PARN	100	72.939	ENSACAG00000004973	PARN	99	73.839	Anolis_carolinensis
ENSPVAG00000002547	PARN	100	88.449	ENSANAG00000031516	PARN	98	98.077	Aotus_nancymaae
ENSPVAG00000002547	PARN	91	71.304	ENSACLG00000004742	parn	83	71.304	Astatotilapia_calliptera
ENSPVAG00000002547	PARN	90	70.141	ENSAMXG00000012390	parn	91	68.476	Astyanax_mexicanus
ENSPVAG00000002547	PARN	100	88.254	ENSBTAG00000018097	PARN	100	90.121	Bos_taurus
ENSPVAG00000002547	PARN	100	89.241	ENSCJAG00000015866	PARN	98	98.077	Callithrix_jacchus
ENSPVAG00000002547	PARN	100	90.174	ENSCAFG00000018795	PARN	99	90.174	Canis_familiaris
ENSPVAG00000002547	PARN	100	90.174	ENSCAFG00020024126	PARN	99	90.174	Canis_lupus_dingo
ENSPVAG00000002547	PARN	100	91.442	ENSCHIG00000018143	PARN	99	91.442	Capra_hircus
ENSPVAG00000002547	PARN	74	58.884	ENSCAPG00000007984	PARN	78	58.884	Cavia_aperea
ENSPVAG00000002547	PARN	100	86.212	ENSCPOG00000002263	PARN	99	86.212	Cavia_porcellus
ENSPVAG00000002547	PARN	100	89.399	ENSCCAG00000030367	PARN	98	98.077	Cebus_capucinus
ENSPVAG00000002547	PARN	90	93.004	ENSCATG00000041368	PARN	98	98.077	Cercocebus_atys
ENSPVAG00000002547	PARN	100	85.895	ENSCLAG00000015406	PARN	99	85.895	Chinchilla_lanigera
ENSPVAG00000002547	PARN	100	89.715	ENSCSAG00000008142	PARN	99	89.715	Chlorocebus_sabaeus
ENSPVAG00000002547	PARN	89	84.019	ENSCHOG00000007014	PARN	92	84.019	Choloepus_hoffmanni
ENSPVAG00000002547	PARN	89	80.392	ENSCPBG00000006609	PARN	97	80.447	Chrysemys_picta_bellii
ENSPVAG00000002547	PARN	80	40.571	ENSCING00000010142	-	98	40.571	Ciona_intestinalis
ENSPVAG00000002547	PARN	100	77.238	ENSCANG00000028849	-	98	98.077	Colobus_angolensis_palliatus
ENSPVAG00000002547	PARN	62	30.500	ENSCGRG00001007470	-	70	30.500	Cricetulus_griseus_chok1gshd
ENSPVAG00000002547	PARN	100	80.854	ENSCGRG00001012096	Parn	99	80.854	Cricetulus_griseus_chok1gshd
ENSPVAG00000002547	PARN	100	80.854	ENSCGRG00000004939	Parn	99	80.854	Cricetulus_griseus_crigri
ENSPVAG00000002547	PARN	62	30.500	ENSCGRG00000010221	-	70	30.500	Cricetulus_griseus_crigri
ENSPVAG00000002547	PARN	92	67.863	ENSCSEG00000002064	parn	96	64.019	Cynoglossus_semilaevis
ENSPVAG00000002547	PARN	83	74.480	ENSCVAG00000014848	parn	78	74.480	Cyprinodon_variegatus
ENSPVAG00000002547	PARN	90	66.784	ENSDARG00000102634	parn	96	58.879	Danio_rerio
ENSPVAG00000002547	PARN	100	90.808	ENSDNOG00000000833	PARN	99	90.808	Dasypus_novemcinctus
ENSPVAG00000002547	PARN	74	94.141	ENSETEG00000014828	-	76	94.141	Echinops_telfairi
ENSPVAG00000002547	PARN	56	48.333	ENSEBUG00000007052	PARN	70	64.286	Eptatretus_burgeri
ENSPVAG00000002547	PARN	100	90.967	ENSEASG00005011400	PARN	99	90.967	Equus_asinus_asinus
ENSPVAG00000002547	PARN	100	90.808	ENSECAG00000017792	PARN	99	90.808	Equus_caballus
ENSPVAG00000002547	PARN	73	94.444	ENSEEUG00000010370	PARN	72	94.444	Erinaceus_europaeus
ENSPVAG00000002547	PARN	95	67.162	ENSELUG00000013139	parn	75	69.191	Esox_lucius
ENSPVAG00000002547	PARN	100	90.491	ENSFCAG00000044961	PARN	98	98.077	Felis_catus
ENSPVAG00000002547	PARN	58	31.250	ENSFALG00000012081	PNLDC1	70	31.250	Ficedula_albicollis
ENSPVAG00000002547	PARN	100	78.922	ENSFALG00000003911	PARN	98	78.922	Ficedula_albicollis
ENSPVAG00000002547	PARN	100	85.737	ENSFDAG00000009234	PARN	99	85.737	Fukomys_damarensis
ENSPVAG00000002547	PARN	92	63.465	ENSFHEG00000013738	parn	81	78.846	Fundulus_heteroclitus
ENSPVAG00000002547	PARN	83	73.245	ENSGMOG00000003231	parn	96	73.245	Gadus_morhua
ENSPVAG00000002547	PARN	100	78.922	ENSGALG00000003091	PARN	99	78.922	Gallus_gallus
ENSPVAG00000002547	PARN	90	70.526	ENSGAFG00000011061	parn	83	70.000	Gambusia_affinis
ENSPVAG00000002547	PARN	100	65.149	ENSGACG00000019501	parn	99	65.149	Gasterosteus_aculeatus
ENSPVAG00000002547	PARN	52	72.699	ENSGAGG00000023281	PARN	83	72.699	Gopherus_agassizii
ENSPVAG00000002547	PARN	58	30.105	ENSGAGG00000015276	PNLDC1	73	30.105	Gopherus_agassizii
ENSPVAG00000002547	PARN	97	89.739	ENSGGOG00000025224	PARN	98	98.077	Gorilla_gorilla
ENSPVAG00000002547	PARN	62	30.100	ENSGGOG00000014077	PNLDC1	70	30.100	Gorilla_gorilla
ENSPVAG00000002547	PARN	91	71.304	ENSHBUG00000017906	parn	89	73.774	Haplochromis_burtoni
ENSPVAG00000002547	PARN	100	85.578	ENSHGLG00000010886	PARN	99	85.578	Heterocephalus_glaber_female
ENSPVAG00000002547	PARN	100	85.578	ENSHGLG00100014659	PARN	99	85.578	Heterocephalus_glaber_male
ENSPVAG00000002547	PARN	83	70.265	ENSHCOG00000008683	parn	91	70.265	Hippocampus_comes
ENSPVAG00000002547	PARN	90	61.955	ENSIPUG00000012401	parn	83	61.955	Ictalurus_punctatus
ENSPVAG00000002547	PARN	100	86.846	ENSSTOG00000007519	PARN	99	86.846	Ictidomys_tridecemlineatus
ENSPVAG00000002547	PARN	100	84.311	ENSJJAG00000023049	Parn	99	84.311	Jaculus_jaculus
ENSPVAG00000002547	PARN	92	70.698	ENSKMAG00000009462	parn	83	70.698	Kryptolebias_marmoratus
ENSPVAG00000002547	PARN	90	70.435	ENSLBEG00000009167	parn	88	70.435	Labrus_bergylta
ENSPVAG00000002547	PARN	79	73.956	ENSLACG00000004207	PARN	98	76.923	Latimeria_chalumnae
ENSPVAG00000002547	PARN	92	71.945	ENSLOCG00000000715	parn	84	71.945	Lepisosteus_oculatus
ENSPVAG00000002547	PARN	100	89.223	ENSLAFG00000015036	PARN	99	89.223	Loxodonta_africana
ENSPVAG00000002547	PARN	100	84.992	ENSMFAG00000044852	PARN	98	98.077	Macaca_fascicularis
ENSPVAG00000002547	PARN	100	89.715	ENSMMUG00000018849	PARN	98	98.077	Macaca_mulatta
ENSPVAG00000002547	PARN	100	89.873	ENSMNEG00000045108	PARN	98	98.077	Macaca_nemestrina
ENSPVAG00000002547	PARN	100	89.715	ENSMLEG00000031743	PARN	98	98.077	Mandrillus_leucophaeus
ENSPVAG00000002547	PARN	50	31.288	ENSMLEG00000044059	PNLDC1	58	31.288	Mandrillus_leucophaeus
ENSPVAG00000002547	PARN	83	74.858	ENSMAMG00000006939	parn	77	74.858	Mastacembelus_armatus
ENSPVAG00000002547	PARN	91	71.304	ENSMZEG00005013590	parn	94	70.515	Maylandia_zebra
ENSPVAG00000002547	PARN	96	78.947	ENSMGAG00000001004	PARN	95	78.947	Meleagris_gallopavo
ENSPVAG00000002547	PARN	100	75.312	ENSMAUG00000008025	Parn	99	75.312	Mesocricetus_auratus
ENSPVAG00000002547	PARN	100	90.333	ENSMICG00000016053	PARN	98	100.000	Microcebus_murinus
ENSPVAG00000002547	PARN	77	86.037	ENSMOCG00000022211	Parn	99	86.037	Microtus_ochrogaster
ENSPVAG00000002547	PARN	83	73.485	ENSMMOG00000011333	parn	86	73.485	Mola_mola
ENSPVAG00000002547	PARN	77	89.366	ENSMODG00000004915	PARN	98	89.366	Monodelphis_domestica
ENSPVAG00000002547	PARN	83	75.803	ENSMALG00000019426	parn	89	75.803	Monopterus_albus
ENSPVAG00000002547	PARN	100	81.933	MGP_CAROLIEiJ_G0020466	Parn	99	81.933	Mus_caroli
ENSPVAG00000002547	PARN	62	30.000	MGP_CAROLIEiJ_G0021045	Pnldc1	70	30.000	Mus_caroli
ENSPVAG00000002547	PARN	100	81.775	ENSMUSG00000022685	Parn	91	93.333	Mus_musculus
ENSPVAG00000002547	PARN	50	31.173	ENSMUSG00000073460	Pnldc1	95	31.173	Mus_musculus
ENSPVAG00000002547	PARN	100	81.775	MGP_PahariEiJ_G0016172	Parn	99	81.775	Mus_pahari
ENSPVAG00000002547	PARN	100	81.775	MGP_SPRETEiJ_G0021361	Parn	99	81.775	Mus_spretus
ENSPVAG00000002547	PARN	100	90.491	ENSMPUG00000014464	PARN	99	90.491	Mustela_putorius_furo
ENSPVAG00000002547	PARN	77	90.965	ENSMLUG00000005414	PARN	99	90.965	Myotis_lucifugus
ENSPVAG00000002547	PARN	83	73.396	ENSNBRG00000006805	parn	89	73.396	Neolamprologus_brichardi
ENSPVAG00000002547	PARN	100	89.082	ENSNLEG00000010241	PARN	98	98.077	Nomascus_leucogenys
ENSPVAG00000002547	PARN	100	58.637	ENSMEUG00000008178	-	100	58.637	Notamacropus_eugenii
ENSPVAG00000002547	PARN	100	82.567	ENSOPRG00000012187	PARN	100	82.567	Ochotona_princeps
ENSPVAG00000002547	PARN	100	77.287	ENSODEG00000001617	PARN	99	77.287	Octodon_degus
ENSPVAG00000002547	PARN	100	66.407	ENSONIG00000000151	parn	99	66.407	Oreochromis_niloticus
ENSPVAG00000002547	PARN	60	77.105	ENSOANG00000020155	-	97	77.368	Ornithorhynchus_anatinus
ENSPVAG00000002547	PARN	58	31.481	ENSOANG00000012199	PNLDC1	73	30.923	Ornithorhynchus_anatinus
ENSPVAG00000002547	PARN	100	88.273	ENSOCUG00000000322	PARN	99	88.273	Oryctolagus_cuniculus
ENSPVAG00000002547	PARN	83	74.291	ENSORLG00020010313	parn	79	74.291	Oryzias_latipes_hni
ENSPVAG00000002547	PARN	83	74.291	ENSORLG00015000300	parn	79	74.291	Oryzias_latipes_hsok
ENSPVAG00000002547	PARN	95	67.213	ENSOMEG00000019555	parn	94	66.355	Oryzias_melastigma
ENSPVAG00000002547	PARN	77	89.139	ENSOGAG00000014626	PARN	99	89.139	Otolemur_garnettii
ENSPVAG00000002547	PARN	77	93.429	ENSOARG00000007574	PARN	99	93.429	Ovis_aries
ENSPVAG00000002547	PARN	100	89.557	ENSPPAG00000031438	PARN	98	98.077	Pan_paniscus
ENSPVAG00000002547	PARN	62	30.100	ENSPPAG00000026651	PNLDC1	70	30.100	Pan_paniscus
ENSPVAG00000002547	PARN	100	90.333	ENSPPRG00000018583	PARN	98	98.077	Panthera_pardus
ENSPVAG00000002547	PARN	100	90.333	ENSPTIG00000012135	PARN	98	98.077	Panthera_tigris_altaica
ENSPVAG00000002547	PARN	100	89.557	ENSPTRG00000007792	PARN	98	98.077	Pan_troglodytes
ENSPVAG00000002547	PARN	62	30.100	ENSPTRG00000018762	PNLDC1	70	30.100	Pan_troglodytes
ENSPVAG00000002547	PARN	100	86.709	ENSPANG00000020099	PARN	98	98.077	Papio_anubis
ENSPVAG00000002547	PARN	91	71.154	ENSPKIG00000022807	parn	90	66.609	Paramormyrops_kingsleyae
ENSPVAG00000002547	PARN	99	79.647	ENSPSIG00000014804	PARN	100	79.376	Pelodiscus_sinensis
ENSPVAG00000002547	PARN	80	74.556	ENSPMGG00000014431	parn	76	71.298	Periophthalmus_magnuspinnatus
ENSPVAG00000002547	PARN	100	79.081	ENSPEMG00000018439	Parn	99	79.081	Peromyscus_maniculatus_bairdii
ENSPVAG00000002547	PARN	80	64.567	ENSPMAG00000003956	parn	96	64.567	Petromyzon_marinus
ENSPVAG00000002547	PARN	65	85.990	ENSPCIG00000001259	PARN	90	85.990	Phascolarctos_cinereus
ENSPVAG00000002547	PARN	83	74.291	ENSPFOG00000012823	parn	83	69.060	Poecilia_formosa
ENSPVAG00000002547	PARN	83	74.480	ENSPLAG00000006395	parn	83	69.231	Poecilia_latipinna
ENSPVAG00000002547	PARN	83	74.480	ENSPMEG00000007711	parn	83	69.402	Poecilia_mexicana
ENSPVAG00000002547	PARN	83	74.291	ENSPREG00000000147	parn	83	69.231	Poecilia_reticulata
ENSPVAG00000002547	PARN	100	89.432	ENSPPYG00000007123	PARN	99	89.432	Pongo_abelii
ENSPVAG00000002547	PARN	96	79.339	ENSPCAG00000001741	PARN	100	79.339	Procavia_capensis
ENSPVAG00000002547	PARN	100	87.797	ENSPCOG00000019292	PARN	98	100.000	Propithecus_coquereli
ENSPVAG00000002547	PARN	90	71.553	ENSPNYG00000006835	parn	94	67.851	Pundamilia_nyererei
ENSPVAG00000002547	PARN	83	68.691	ENSPNAG00000018905	parn	84	69.639	Pygocentrus_nattereri
ENSPVAG00000002547	PARN	50	31.173	ENSRNOG00000023140	Pnldc1	87	31.173	Rattus_norvegicus
ENSPVAG00000002547	PARN	100	79.661	ENSRNOG00000002912	Parn	98	86.869	Rattus_norvegicus
ENSPVAG00000002547	PARN	53	82.883	ENSRBIG00000018726	PARN	100	82.883	Rhinopithecus_bieti
ENSPVAG00000002547	PARN	53	82.883	ENSRROG00000011162	-	100	82.883	Rhinopithecus_roxellana
ENSPVAG00000002547	PARN	100	87.816	ENSSBOG00000034726	PARN	98	98.077	Saimiri_boliviensis_boliviensis
ENSPVAG00000002547	PARN	62	30.100	ENSSHAG00000015192	PNLDC1	68	30.208	Sarcophilus_harrisii
ENSPVAG00000002547	PARN	65	93.462	ENSSHAG00000008493	PARN	92	93.462	Sarcophilus_harrisii
ENSPVAG00000002547	PARN	96	69.079	ENSSFOG00015014165	parn	91	70.599	Scleropages_formosus
ENSPVAG00000002547	PARN	83	72.968	ENSSMAG00000000685	parn	86	68.037	Scophthalmus_maximus
ENSPVAG00000002547	PARN	99	65.367	ENSSDUG00000014555	parn	82	70.191	Seriola_dumerili
ENSPVAG00000002547	PARN	92	76.857	ENSSARG00000014339	PARN	100	76.857	Sorex_araneus
ENSPVAG00000002547	PARN	100	80.983	ENSSPUG00000007719	PARN	99	80.983	Sphenodon_punctatus
ENSPVAG00000002547	PARN	91	72.348	ENSSPAG00000007095	parn	85	71.917	Stegastes_partitus
ENSPVAG00000002547	PARN	100	90.016	ENSSSCG00000007878	PARN	88	90.016	Sus_scrofa
ENSPVAG00000002547	PARN	100	79.081	ENSTGUG00000004971	PARN	99	79.081	Taeniopygia_guttata
ENSPVAG00000002547	PARN	56	30.726	ENSTGUG00000011418	PNLDC1	68	30.726	Taeniopygia_guttata
ENSPVAG00000002547	PARN	100	65.571	ENSTNIG00000008252	parn	99	65.728	Tetraodon_nigroviridis
ENSPVAG00000002547	PARN	92	75.820	ENSTBEG00000010407	PARN	100	75.820	Tupaia_belangeri
ENSPVAG00000002547	PARN	100	86.529	ENSTTRG00000002843	PARN	100	86.529	Tursiops_truncatus
ENSPVAG00000002547	PARN	69	78.670	ENSUAMG00000008283	PARN	90	78.670	Ursus_americanus
ENSPVAG00000002547	PARN	100	90.016	ENSUMAG00000004527	PARN	99	90.016	Ursus_maritimus
ENSPVAG00000002547	PARN	97	87.134	ENSVPAG00000008968	PARN	100	87.134	Vicugna_pacos
ENSPVAG00000002547	PARN	100	90.650	ENSVVUG00000019509	PARN	99	90.650	Vulpes_vulpes
ENSPVAG00000002547	PARN	100	71.791	ENSXETG00000010994	parn	99	79.383	Xenopus_tropicalis
ENSPVAG00000002547	PARN	90	65.535	ENSXCOG00000015990	parn	95	65.109	Xiphophorus_couchianus
ENSPVAG00000002547	PARN	92	69.402	ENSXMAG00000014783	parn	83	69.402	Xiphophorus_maculatus