EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000002716 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 2836 bases
Position: chrscaffold_1711:128932-131767
Accession: 105299909
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000002565	RRM_1	PF00076.22	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000002715	PABPN1L-201	843	XM_011371877	ENSPVAP00000002565	280 (aa)	XP_011370179	UPI00018B2D00

Gene Model

Click here to download ENSPVAG00000002716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000002716's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000002716	PABPN1L	56	57.143	ENSPVAG00000005270	PABPN1	65	49.761

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000002716	PABPN1L	100	69.149	ENSG00000205022	PABPN1L	100	69.149	Homo_sapiens
ENSPVAG00000002716	PABPN1L	51	59.184	ENSAPOG00000000685	PABPN1L	58	53.804	Acanthochromis_polyacanthus
ENSPVAG00000002716	PABPN1L	55	58.125	ENSACIG00000021400	PABPN1L	93	57.143	Amphilophus_citrinellus
ENSPVAG00000002716	PABPN1L	58	52.727	ENSAOCG00000019844	PABPN1L	71	50.746	Amphiprion_ocellaris
ENSPVAG00000002716	PABPN1L	58	52.727	ENSAPEG00000019534	PABPN1L	71	50.746	Amphiprion_percula
ENSPVAG00000002716	PABPN1L	70	56.410	ENSACAG00000013250	PABPN1L	99	56.410	Anolis_carolinensis
ENSPVAG00000002716	PABPN1L	100	66.312	ENSANAG00000038178	PABPN1L	100	66.667	Aotus_nancymaae
ENSPVAG00000002716	PABPN1L	72	49.261	ENSACLG00000025147	PABPN1L	71	51.244	Astatotilapia_calliptera
ENSPVAG00000002716	PABPN1L	55	55.195	ENSAMXG00000010873	PABPN1L	66	52.841	Astyanax_mexicanus
ENSPVAG00000002716	PABPN1L	100	72.500	ENSBTAG00000023752	-	100	73.214	Bos_taurus
ENSPVAG00000002716	PABPN1L	56	76.282	ENSBTAG00000006727	-	95	76.282	Bos_taurus
ENSPVAG00000002716	PABPN1L	100	66.667	ENSCJAG00000045284	PABPN1L	100	67.730	Callithrix_jacchus
ENSPVAG00000002716	PABPN1L	97	71.956	ENSCHIG00000013987	PABPN1L	100	67.361	Capra_hircus
ENSPVAG00000002716	PABPN1L	95	63.406	ENSCAPG00000007240	PABPN1L	100	63.768	Cavia_aperea
ENSPVAG00000002716	PABPN1L	100	64.894	ENSCPOG00000025951	PABPN1L	100	65.248	Cavia_porcellus
ENSPVAG00000002716	PABPN1L	100	65.603	ENSCCAG00000027631	PABPN1L	100	67.376	Cebus_capucinus
ENSPVAG00000002716	PABPN1L	100	67.376	ENSCATG00000031060	PABPN1L	100	68.794	Cercocebus_atys
ENSPVAG00000002716	PABPN1L	100	67.730	ENSCLAG00000000704	PABPN1L	100	67.021	Chinchilla_lanigera
ENSPVAG00000002716	PABPN1L	100	65.436	ENSCSAG00000002881	PABPN1L	100	65.772	Chlorocebus_sabaeus
ENSPVAG00000002716	PABPN1L	70	56.853	ENSCPBG00000023441	PABPN1L	61	58.586	Chrysemys_picta_bellii
ENSPVAG00000002716	PABPN1L	100	66.667	ENSCANG00000039336	PABPN1L	100	67.730	Colobus_angolensis_palliatus
ENSPVAG00000002716	PABPN1L	100	67.021	ENSCGRG00001013211	Pabpn1l	100	67.021	Cricetulus_griseus_chok1gshd
ENSPVAG00000002716	PABPN1L	100	67.021	ENSCGRG00000015868	Pabpn1l	100	67.021	Cricetulus_griseus_crigri
ENSPVAG00000002716	PABPN1L	59	52.439	ENSCSEG00000001142	pabpn1l	72	50.510	Cynoglossus_semilaevis
ENSPVAG00000002716	PABPN1L	58	53.333	ENSCVAG00000015547	PABPN1L	71	51.485	Cyprinodon_variegatus
ENSPVAG00000002716	PABPN1L	100	57.295	ENSDNOG00000034677	PABPN1L	100	57.295	Dasypus_novemcinctus
ENSPVAG00000002716	PABPN1L	100	76.071	ENSEASG00005000777	PABPN1L	100	75.714	Equus_asinus_asinus
ENSPVAG00000002716	PABPN1L	100	75.714	ENSECAG00000000378	PABPN1L	100	75.357	Equus_caballus
ENSPVAG00000002716	PABPN1L	100	62.857	ENSEEUG00000004747	PABPN1L	100	61.429	Erinaceus_europaeus
ENSPVAG00000002716	PABPN1L	58	53.659	ENSELUG00000018385	PABPN1L	61	54.819	Esox_lucius
ENSPVAG00000002716	PABPN1L	100	78.929	ENSFCAG00000010465	PABPN1L	100	78.214	Felis_catus
ENSPVAG00000002716	PABPN1L	72	56.931	ENSFALG00000003319	PABPN1L	80	56.931	Ficedula_albicollis
ENSPVAG00000002716	PABPN1L	100	67.730	ENSFDAG00000021067	PABPN1L	100	66.667	Fukomys_damarensis
ENSPVAG00000002716	PABPN1L	58	53.012	ENSFHEG00000018295	PABPN1L	71	50.000	Fundulus_heteroclitus
ENSPVAG00000002716	PABPN1L	53	68.000	ENSGALG00000006242	PABPN1L	85	68.000	Gallus_gallus
ENSPVAG00000002716	PABPN1L	58	54.545	ENSGAFG00000012565	PABPN1L	71	51.980	Gambusia_affinis
ENSPVAG00000002716	PABPN1L	58	51.479	ENSGACG00000015428	PABPN1L	72	49.756	Gasterosteus_aculeatus
ENSPVAG00000002716	PABPN1L	65	57.459	ENSGAGG00000010613	PABPN1L	59	57.459	Gopherus_agassizii
ENSPVAG00000002716	PABPN1L	100	67.376	ENSGGOG00000012670	PABPN1L	100	68.794	Gorilla_gorilla
ENSPVAG00000002716	PABPN1L	72	49.261	ENSHBUG00000002388	PABPN1L	71	49.500	Haplochromis_burtoni
ENSPVAG00000002716	PABPN1L	96	68.148	ENSHGLG00000014207	PABPN1L	100	68.148	Heterocephalus_glaber_female
ENSPVAG00000002716	PABPN1L	96	68.148	ENSHGLG00100005230	PABPN1L	100	68.148	Heterocephalus_glaber_male
ENSPVAG00000002716	PABPN1L	61	51.163	ENSHCOG00000004151	PABPN1L	73	50.505	Hippocampus_comes
ENSPVAG00000002716	PABPN1L	54	56.667	ENSIPUG00000023583	PABPN1L	76	56.774	Ictalurus_punctatus
ENSPVAG00000002716	PABPN1L	100	67.376	ENSSTOG00000020814	PABPN1L	100	66.667	Ictidomys_tridecemlineatus
ENSPVAG00000002716	PABPN1L	100	65.480	ENSJJAG00000006433	Pabpn1l	100	65.480	Jaculus_jaculus
ENSPVAG00000002716	PABPN1L	58	51.534	ENSLBEG00000011647	PABPN1L	60	53.846	Labrus_bergylta
ENSPVAG00000002716	PABPN1L	70	67.677	ENSLAFG00000025902	-	78	67.677	Loxodonta_africana
ENSPVAG00000002716	PABPN1L	100	67.376	ENSMFAG00000002924	PABPN1L	100	68.794	Macaca_fascicularis
ENSPVAG00000002716	PABPN1L	100	66.548	ENSMMUG00000012438	PABPN1L	100	67.972	Macaca_mulatta
ENSPVAG00000002716	PABPN1L	100	67.376	ENSMNEG00000044808	PABPN1L	100	68.794	Macaca_nemestrina
ENSPVAG00000002716	PABPN1L	100	67.730	ENSMLEG00000032667	PABPN1L	100	69.149	Mandrillus_leucophaeus
ENSPVAG00000002716	PABPN1L	72	49.261	ENSMZEG00005002186	PABPN1L	71	51.244	Maylandia_zebra
ENSPVAG00000002716	PABPN1L	100	63.121	ENSMAUG00000014032	Pabpn1l	100	64.815	Mesocricetus_auratus
ENSPVAG00000002716	PABPN1L	100	68.085	ENSMICG00000028179	PABPN1L	100	68.440	Microcebus_murinus
ENSPVAG00000002716	PABPN1L	100	65.957	ENSMOCG00000007955	Pabpn1l	100	65.603	Microtus_ochrogaster
ENSPVAG00000002716	PABPN1L	100	52.265	ENSMODG00000003873	-	100	49.826	Monodelphis_domestica
ENSPVAG00000002716	PABPN1L	59	52.976	ENSMALG00000016926	PABPN1L	71	48.500	Monopterus_albus
ENSPVAG00000002716	PABPN1L	100	65.248	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	64.184	Mus_caroli
ENSPVAG00000002716	PABPN1L	100	65.248	ENSMUSG00000069867	Pabpn1l	100	64.184	Mus_musculus
ENSPVAG00000002716	PABPN1L	100	64.184	MGP_PahariEiJ_G0023268	Pabpn1l	100	63.121	Mus_pahari
ENSPVAG00000002716	PABPN1L	100	64.894	MGP_SPRETEiJ_G0032788	Pabpn1l	100	63.830	Mus_spretus
ENSPVAG00000002716	PABPN1L	96	56.940	ENSMLUG00000003228	PABPN1L	95	55.516	Myotis_lucifugus
ENSPVAG00000002716	PABPN1L	100	67.021	ENSNGAG00000023992	Pabpn1l	100	66.667	Nannospalax_galili
ENSPVAG00000002716	PABPN1L	53	59.732	ENSNBRG00000017078	PABPN1L	72	50.270	Neolamprologus_brichardi
ENSPVAG00000002716	PABPN1L	100	68.551	ENSOPRG00000005597	PABPN1L	100	67.491	Ochotona_princeps
ENSPVAG00000002716	PABPN1L	100	59.524	ENSODEG00000004649	PABPN1L	100	59.524	Octodon_degus
ENSPVAG00000002716	PABPN1L	100	55.516	ENSOANG00000013901	PABPN1L	100	55.516	Ornithorhynchus_anatinus
ENSPVAG00000002716	PABPN1L	63	53.107	ENSORLG00000026560	PABPN1L	65	53.107	Oryzias_latipes
ENSPVAG00000002716	PABPN1L	63	53.107	ENSORLG00020015068	PABPN1L	65	53.107	Oryzias_latipes_hni
ENSPVAG00000002716	PABPN1L	63	53.107	ENSORLG00015000397	PABPN1L	65	53.107	Oryzias_latipes_hsok
ENSPVAG00000002716	PABPN1L	76	47.170	ENSOMEG00000017896	PABPN1L	51	49.000	Oryzias_melastigma
ENSPVAG00000002716	PABPN1L	100	69.395	ENSOGAG00000000433	PABPN1L	100	69.039	Otolemur_garnettii
ENSPVAG00000002716	PABPN1L	100	69.836	ENSOARG00000013682	PABPN1L	100	69.836	Ovis_aries
ENSPVAG00000002716	PABPN1L	100	69.858	ENSPPAG00000028866	PABPN1L	100	69.858	Pan_paniscus
ENSPVAG00000002716	PABPN1L	100	78.214	ENSPPRG00000015106	PABPN1L	100	77.500	Panthera_pardus
ENSPVAG00000002716	PABPN1L	93	70.115	ENSPTIG00000015606	PABPN1L	100	69.349	Panthera_tigris_altaica
ENSPVAG00000002716	PABPN1L	100	69.858	ENSPTRG00000031120	PABPN1L	100	69.858	Pan_troglodytes
ENSPVAG00000002716	PABPN1L	100	67.021	ENSPANG00000026039	PABPN1L	100	68.440	Papio_anubis
ENSPVAG00000002716	PABPN1L	100	67.021	ENSPEMG00000016624	Pabpn1l	100	65.603	Peromyscus_maniculatus_bairdii
ENSPVAG00000002716	PABPN1L	51	65.278	ENSPCIG00000007038	-	100	65.278	Phascolarctos_cinereus
ENSPVAG00000002716	PABPN1L	58	54.545	ENSPFOG00000007001	PABPN1L	88	44.068	Poecilia_formosa
ENSPVAG00000002716	PABPN1L	58	54.545	ENSPLAG00000018431	PABPN1L	71	51.980	Poecilia_latipinna
ENSPVAG00000002716	PABPN1L	58	54.545	ENSPMEG00000009108	PABPN1L	71	51.980	Poecilia_mexicana
ENSPVAG00000002716	PABPN1L	100	69.149	ENSPPYG00000007655	PABPN1L	100	69.149	Pongo_abelii
ENSPVAG00000002716	PABPN1L	100	70.567	ENSPCOG00000024077	PABPN1L	100	70.922	Propithecus_coquereli
ENSPVAG00000002716	PABPN1L	72	49.261	ENSPNYG00000004803	PABPN1L	71	51.244	Pundamilia_nyererei
ENSPVAG00000002716	PABPN1L	100	66.312	ENSRNOG00000029558	Pabpn1l	100	65.957	Rattus_norvegicus
ENSPVAG00000002716	PABPN1L	100	68.794	ENSRBIG00000030740	PABPN1L	100	70.213	Rhinopithecus_bieti
ENSPVAG00000002716	PABPN1L	100	68.794	ENSRROG00000032240	-	100	69.504	Rhinopithecus_roxellana
ENSPVAG00000002716	PABPN1L	99	67.260	ENSRROG00000035483	-	99	69.039	Rhinopithecus_roxellana
ENSPVAG00000002716	PABPN1L	100	65.957	ENSSBOG00000018410	PABPN1L	100	67.376	Saimiri_boliviensis_boliviensis
ENSPVAG00000002716	PABPN1L	100	51.000	ENSSHAG00000010001	-	100	50.333	Sarcophilus_harrisii
ENSPVAG00000002716	PABPN1L	59	51.220	ENSSMAG00000021348	PABPN1L	72	50.485	Scophthalmus_maximus
ENSPVAG00000002716	PABPN1L	58	52.727	ENSSDUG00000006986	PABPN1L	71	49.010	Seriola_dumerili
ENSPVAG00000002716	PABPN1L	58	53.333	ENSSLDG00000021845	PABPN1L	71	49.505	Seriola_lalandi_dorsalis
ENSPVAG00000002716	PABPN1L	94	51.515	ENSSARG00000005178	-	99	51.515	Sorex_araneus
ENSPVAG00000002716	PABPN1L	69	58.763	ENSSPUG00000007031	PABPN1L	84	58.974	Sphenodon_punctatus
ENSPVAG00000002716	PABPN1L	72	49.261	ENSSPAG00000017978	PABPN1L	71	49.751	Stegastes_partitus
ENSPVAG00000002716	PABPN1L	100	72.887	ENSSSCG00000036367	PABPN1L	100	72.535	Sus_scrofa
ENSPVAG00000002716	PABPN1L	58	52.761	ENSTRUG00000024725	PABPN1L	81	50.769	Takifugu_rubripes
ENSPVAG00000002716	PABPN1L	100	75.714	ENSTTRG00000004691	PABPN1L	100	75.357	Tursiops_truncatus
ENSPVAG00000002716	PABPN1L	59	50.000	ENSXETG00000011258	pabpn1l	96	48.416	Xenopus_tropicalis