EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000002820 (Gene tree)
Gene ID: -
Gene Symbol: SF3B5
Alias: MGC3133|SF3b10|Ysf3
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 144 bases
Position: chrscaffold_11036:25219-25362
Accession: 21083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000002664	SF3b10	PF07189.11	7.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000002820	SF3B5-201	144	-	ENSPVAP00000002664	48 (aa)	-	UPI00018B17D6

Gene Model

Click here to download ENSPVAG00000002820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000002820's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000002820	SF3B5	100	100.000	ENSG00000169976	SF3B5	56	100.000	Homo_sapiens
ENSPVAG00000002820	SF3B5	100	95.833	ENSAPOG00000001721	sf3b5	56	95.833	Acanthochromis_polyacanthus
ENSPVAG00000002820	SF3B5	100	95.833	ENSACIG00000008106	sf3b5	56	95.833	Amphilophus_citrinellus
ENSPVAG00000002820	SF3B5	100	95.833	ENSAOCG00000023367	sf3b5	56	95.833	Amphiprion_ocellaris
ENSPVAG00000002820	SF3B5	100	95.833	ENSAPEG00000004605	sf3b5	56	95.833	Amphiprion_percula
ENSPVAG00000002820	SF3B5	100	95.833	ENSATEG00000009720	sf3b5	56	95.833	Anabas_testudineus
ENSPVAG00000002820	SF3B5	100	100.000	ENSACAG00000007948	SF3B5	56	100.000	Anolis_carolinensis
ENSPVAG00000002820	SF3B5	100	100.000	ENSANAG00000019999	SF3B5	56	100.000	Aotus_nancymaae
ENSPVAG00000002820	SF3B5	100	95.833	ENSACLG00000022410	sf3b5	56	95.833	Astatotilapia_calliptera
ENSPVAG00000002820	SF3B5	100	100.000	ENSBTAG00000009795	SF3B5	56	100.000	Bos_taurus
ENSPVAG00000002820	SF3B5	100	100.000	ENSCJAG00000046566	SF3B5	56	100.000	Callithrix_jacchus
ENSPVAG00000002820	SF3B5	100	100.000	ENSCAFG00000032495	SF3B5	56	100.000	Canis_familiaris
ENSPVAG00000002820	SF3B5	100	100.000	ENSCAFG00020000873	SF3B5	56	100.000	Canis_lupus_dingo
ENSPVAG00000002820	SF3B5	100	100.000	ENSCHIG00000007987	SF3B5	56	100.000	Capra_hircus
ENSPVAG00000002820	SF3B5	100	100.000	ENSTSYG00000012236	SF3B5	56	100.000	Carlito_syrichta
ENSPVAG00000002820	SF3B5	100	100.000	ENSCPOG00000012435	SF3B5	56	100.000	Cavia_porcellus
ENSPVAG00000002820	SF3B5	100	100.000	ENSCCAG00000006528	SF3B5	56	100.000	Cebus_capucinus
ENSPVAG00000002820	SF3B5	100	100.000	ENSCATG00000010192	SF3B5	56	100.000	Cercocebus_atys
ENSPVAG00000002820	SF3B5	100	100.000	ENSCLAG00000017802	SF3B5	56	100.000	Chinchilla_lanigera
ENSPVAG00000002820	SF3B5	100	100.000	ENSCSAG00000000187	SF3B5	56	100.000	Chlorocebus_sabaeus
ENSPVAG00000002820	SF3B5	100	100.000	ENSCPBG00000017148	SF3B5	56	100.000	Chrysemys_picta_bellii
ENSPVAG00000002820	SF3B5	100	72.917	ENSCING00000021953	-	56	72.917	Ciona_intestinalis
ENSPVAG00000002820	SF3B5	100	100.000	ENSCANG00000002639	SF3B5	56	100.000	Colobus_angolensis_palliatus
ENSPVAG00000002820	SF3B5	100	100.000	ENSCGRG00001007249	Sf3b5	56	100.000	Cricetulus_griseus_chok1gshd
ENSPVAG00000002820	SF3B5	100	100.000	ENSCGRG00000019185	Sf3b5	56	100.000	Cricetulus_griseus_crigri
ENSPVAG00000002820	SF3B5	100	95.833	ENSCSEG00000003216	sf3b5	56	95.833	Cynoglossus_semilaevis
ENSPVAG00000002820	SF3B5	100	95.833	ENSCVAG00000005040	sf3b5	56	95.833	Cyprinodon_variegatus
ENSPVAG00000002820	SF3B5	100	95.833	ENSDARG00000016855	sf3b5	56	95.833	Danio_rerio
ENSPVAG00000002820	SF3B5	100	100.000	ENSDORG00000005838	Sf3b5	56	100.000	Dipodomys_ordii
ENSPVAG00000002820	SF3B5	100	83.333	FBgn0040534	Sf3b5	56	83.333	Drosophila_melanogaster
ENSPVAG00000002820	SF3B5	100	100.000	ENSETEG00000004047	SF3B5	56	100.000	Echinops_telfairi
ENSPVAG00000002820	SF3B5	100	87.500	ENSEBUG00000002311	sf3b5	56	87.500	Eptatretus_burgeri
ENSPVAG00000002820	SF3B5	100	100.000	ENSEASG00005009522	SF3B5	56	100.000	Equus_asinus_asinus
ENSPVAG00000002820	SF3B5	100	100.000	ENSECAG00000005457	SF3B5	56	100.000	Equus_caballus
ENSPVAG00000002820	SF3B5	100	95.833	ENSELUG00000014290	SF3B5	56	95.833	Esox_lucius
ENSPVAG00000002820	SF3B5	100	100.000	ENSFCAG00000000936	SF3B5	56	100.000	Felis_catus
ENSPVAG00000002820	SF3B5	100	95.833	ENSFALG00000015012	SF3B5	56	95.833	Ficedula_albicollis
ENSPVAG00000002820	SF3B5	100	100.000	ENSFDAG00000003664	SF3B5	56	100.000	Fukomys_damarensis
ENSPVAG00000002820	SF3B5	100	95.833	ENSFHEG00000020301	sf3b5	56	95.833	Fundulus_heteroclitus
ENSPVAG00000002820	SF3B5	100	95.833	ENSGMOG00000019972	sf3b5	56	95.833	Gadus_morhua
ENSPVAG00000002820	SF3B5	100	100.000	ENSGALG00000030824	SF3B5	56	100.000	Gallus_gallus
ENSPVAG00000002820	SF3B5	100	95.833	ENSGAFG00000000271	sf3b5	56	95.833	Gambusia_affinis
ENSPVAG00000002820	SF3B5	100	95.833	ENSGACG00000010363	sf3b5	56	95.833	Gasterosteus_aculeatus
ENSPVAG00000002820	SF3B5	100	100.000	ENSGAGG00000011434	SF3B5	56	100.000	Gopherus_agassizii
ENSPVAG00000002820	SF3B5	100	95.833	ENSGAGG00000000646	-	56	95.833	Gopherus_agassizii
ENSPVAG00000002820	SF3B5	100	100.000	ENSGGOG00000001537	SF3B5	56	100.000	Gorilla_gorilla
ENSPVAG00000002820	SF3B5	100	95.833	ENSHBUG00000008925	sf3b5	56	95.833	Haplochromis_burtoni
ENSPVAG00000002820	SF3B5	100	100.000	ENSHGLG00000021406	SF3B5	56	100.000	Heterocephalus_glaber_female
ENSPVAG00000002820	SF3B5	100	100.000	ENSHGLG00100020370	SF3B5	56	100.000	Heterocephalus_glaber_male
ENSPVAG00000002820	SF3B5	100	93.750	ENSHCOG00000016806	sf3b5	56	93.750	Hippocampus_comes
ENSPVAG00000002820	SF3B5	100	93.750	ENSHCOG00000016802	sf3b5	56	93.750	Hippocampus_comes
ENSPVAG00000002820	SF3B5	100	93.750	ENSHCOG00000009115	-	56	93.750	Hippocampus_comes
ENSPVAG00000002820	SF3B5	100	97.917	ENSIPUG00000015166	sf3b5	56	97.917	Ictalurus_punctatus
ENSPVAG00000002820	SF3B5	100	100.000	ENSSTOG00000003347	SF3B5	56	100.000	Ictidomys_tridecemlineatus
ENSPVAG00000002820	SF3B5	100	100.000	ENSJJAG00000001857	Sf3b5	56	100.000	Jaculus_jaculus
ENSPVAG00000002820	SF3B5	100	95.833	ENSKMAG00000002249	sf3b5	56	95.833	Kryptolebias_marmoratus
ENSPVAG00000002820	SF3B5	100	95.833	ENSLBEG00000019847	sf3b5	56	95.833	Labrus_bergylta
ENSPVAG00000002820	SF3B5	100	100.000	ENSLACG00000000946	SF3B5	56	100.000	Latimeria_chalumnae
ENSPVAG00000002820	SF3B5	100	97.917	ENSLOCG00000017352	sf3b5	56	97.917	Lepisosteus_oculatus
ENSPVAG00000002820	SF3B5	100	100.000	ENSLAFG00000032489	SF3B5	56	100.000	Loxodonta_africana
ENSPVAG00000002820	SF3B5	100	100.000	ENSMFAG00000029753	SF3B5	56	100.000	Macaca_fascicularis
ENSPVAG00000002820	SF3B5	100	100.000	ENSMMUG00000047691	SF3B5	56	100.000	Macaca_mulatta
ENSPVAG00000002820	SF3B5	100	100.000	ENSMNEG00000028236	SF3B5	56	100.000	Macaca_nemestrina
ENSPVAG00000002820	SF3B5	100	100.000	ENSMLEG00000007622	SF3B5	56	100.000	Mandrillus_leucophaeus
ENSPVAG00000002820	SF3B5	100	95.833	ENSMAMG00000021639	sf3b5	56	95.833	Mastacembelus_armatus
ENSPVAG00000002820	SF3B5	100	95.833	ENSMZEG00005027407	sf3b5	64	95.833	Maylandia_zebra
ENSPVAG00000002820	SF3B5	100	95.833	ENSMZEG00005027408	sf3b5	56	95.833	Maylandia_zebra
ENSPVAG00000002820	SF3B5	100	95.833	ENSMZEG00005028115	SF3B5	56	95.833	Maylandia_zebra
ENSPVAG00000002820	SF3B5	100	100.000	ENSMGAG00000015849	SF3B5	56	100.000	Meleagris_gallopavo
ENSPVAG00000002820	SF3B5	100	100.000	ENSMAUG00000008283	Sf3b5	56	100.000	Mesocricetus_auratus
ENSPVAG00000002820	SF3B5	100	100.000	ENSMICG00000014922	SF3B5	56	100.000	Microcebus_murinus
ENSPVAG00000002820	SF3B5	100	100.000	ENSMOCG00000001713	Sf3b5	56	100.000	Microtus_ochrogaster
ENSPVAG00000002820	SF3B5	100	95.833	ENSMMOG00000007956	sf3b5	56	95.833	Mola_mola
ENSPVAG00000002820	SF3B5	100	95.833	ENSMALG00000020357	sf3b5	59	95.833	Monopterus_albus
ENSPVAG00000002820	SF3B5	100	100.000	MGP_CAROLIEiJ_G0015120	Sf3b5	56	100.000	Mus_caroli
ENSPVAG00000002820	SF3B5	100	100.000	ENSMUSG00000078348	Sf3b5	56	100.000	Mus_musculus
ENSPVAG00000002820	SF3B5	100	100.000	MGP_PahariEiJ_G0023739	Sf3b5	56	100.000	Mus_pahari
ENSPVAG00000002820	SF3B5	100	100.000	MGP_SPRETEiJ_G0015928	Sf3b5	56	100.000	Mus_spretus
ENSPVAG00000002820	SF3B5	100	100.000	ENSMPUG00000018379	SF3B5	56	100.000	Mustela_putorius_furo
ENSPVAG00000002820	SF3B5	100	97.917	ENSMLUG00000010802	-	56	97.917	Myotis_lucifugus
ENSPVAG00000002820	SF3B5	100	100.000	ENSMLUG00000025546	-	56	100.000	Myotis_lucifugus
ENSPVAG00000002820	SF3B5	100	100.000	ENSMLUG00000028504	-	56	100.000	Myotis_lucifugus
ENSPVAG00000002820	SF3B5	100	100.000	ENSNGAG00000010732	Sf3b5	56	100.000	Nannospalax_galili
ENSPVAG00000002820	SF3B5	100	95.833	ENSNBRG00000014383	sf3b5	56	95.833	Neolamprologus_brichardi
ENSPVAG00000002820	SF3B5	100	100.000	ENSNLEG00000019307	SF3B5	56	100.000	Nomascus_leucogenys
ENSPVAG00000002820	SF3B5	100	100.000	ENSMEUG00000005440	-	56	100.000	Notamacropus_eugenii
ENSPVAG00000002820	SF3B5	100	100.000	ENSMEUG00000005445	-	56	100.000	Notamacropus_eugenii
ENSPVAG00000002820	SF3B5	100	100.000	ENSOPRG00000015107	SF3B5	56	100.000	Ochotona_princeps
ENSPVAG00000002820	SF3B5	100	100.000	ENSODEG00000019507	SF3B5	56	100.000	Octodon_degus
ENSPVAG00000002820	SF3B5	100	95.833	ENSONIG00000020725	sf3b5	56	95.833	Oreochromis_niloticus
ENSPVAG00000002820	SF3B5	100	100.000	ENSOCUG00000008752	SF3B5	56	100.000	Oryctolagus_cuniculus
ENSPVAG00000002820	SF3B5	100	97.917	ENSORLG00000004925	sf3b5	56	97.917	Oryzias_latipes
ENSPVAG00000002820	SF3B5	100	97.917	ENSORLG00020011625	sf3b5	56	97.917	Oryzias_latipes_hni
ENSPVAG00000002820	SF3B5	100	97.917	ENSORLG00015017061	sf3b5	56	97.917	Oryzias_latipes_hsok
ENSPVAG00000002820	SF3B5	100	97.917	ENSOMEG00000010620	sf3b5	56	97.917	Oryzias_melastigma
ENSPVAG00000002820	SF3B5	100	100.000	ENSOGAG00000012152	SF3B5	56	100.000	Otolemur_garnettii
ENSPVAG00000002820	SF3B5	92	100.000	ENSOARG00000019486	-	53	100.000	Ovis_aries
ENSPVAG00000002820	SF3B5	100	95.833	ENSOARG00000002617	SF3B5	56	95.833	Ovis_aries
ENSPVAG00000002820	SF3B5	100	100.000	ENSPPAG00000012940	SF3B5	56	100.000	Pan_paniscus
ENSPVAG00000002820	SF3B5	100	100.000	ENSPPRG00000021262	SF3B5	56	100.000	Panthera_pardus
ENSPVAG00000002820	SF3B5	100	100.000	ENSPTIG00000001952	SF3B5	56	100.000	Panthera_tigris_altaica
ENSPVAG00000002820	SF3B5	100	100.000	ENSPTRG00000018676	SF3B5	56	100.000	Pan_troglodytes
ENSPVAG00000002820	SF3B5	100	100.000	ENSPANG00000034242	SF3B5	56	100.000	Papio_anubis
ENSPVAG00000002820	SF3B5	100	97.917	ENSPKIG00000006057	sf3b5	56	97.917	Paramormyrops_kingsleyae
ENSPVAG00000002820	SF3B5	100	100.000	ENSPSIG00000001262	SF3B5	56	100.000	Pelodiscus_sinensis
ENSPVAG00000002820	SF3B5	100	95.833	ENSPMGG00000014804	sf3b5	56	95.833	Periophthalmus_magnuspinnatus
ENSPVAG00000002820	SF3B5	100	100.000	ENSPEMG00000012931	Sf3b5	56	100.000	Peromyscus_maniculatus_bairdii
ENSPVAG00000002820	SF3B5	100	89.583	ENSPMAG00000010296	sf3b5	56	89.583	Petromyzon_marinus
ENSPVAG00000002820	SF3B5	100	81.250	ENSPCIG00000025007	-	56	81.250	Phascolarctos_cinereus
ENSPVAG00000002820	SF3B5	100	95.833	ENSPFOG00000019994	sf3b5	56	95.833	Poecilia_formosa
ENSPVAG00000002820	SF3B5	100	95.833	ENSPLAG00000008412	sf3b5	56	95.833	Poecilia_latipinna
ENSPVAG00000002820	SF3B5	100	95.833	ENSPMEG00000020050	sf3b5	56	95.833	Poecilia_mexicana
ENSPVAG00000002820	SF3B5	100	95.833	ENSPREG00000009242	sf3b5	56	95.833	Poecilia_reticulata
ENSPVAG00000002820	SF3B5	100	100.000	ENSPPYG00000017068	SF3B5	56	100.000	Pongo_abelii
ENSPVAG00000002820	SF3B5	100	100.000	ENSPCAG00000009332	SF3B5	56	100.000	Procavia_capensis
ENSPVAG00000002820	SF3B5	100	100.000	ENSPCOG00000013754	SF3B5	56	100.000	Propithecus_coquereli
ENSPVAG00000002820	SF3B5	100	95.833	ENSPNYG00000002075	sf3b5	56	95.833	Pundamilia_nyererei
ENSPVAG00000002820	SF3B5	100	97.917	ENSPNAG00000004942	sf3b5	56	97.917	Pygocentrus_nattereri
ENSPVAG00000002820	SF3B5	100	100.000	ENSRNOG00000014908	Sf3b5	56	100.000	Rattus_norvegicus
ENSPVAG00000002820	SF3B5	100	100.000	ENSRBIG00000006301	SF3B5	56	100.000	Rhinopithecus_bieti
ENSPVAG00000002820	SF3B5	100	100.000	ENSRROG00000037067	SF3B5	56	100.000	Rhinopithecus_roxellana
ENSPVAG00000002820	SF3B5	100	100.000	ENSSBOG00000006122	SF3B5	56	100.000	Saimiri_boliviensis_boliviensis
ENSPVAG00000002820	SF3B5	100	97.917	ENSSHAG00000015670	SF3B5	56	97.917	Sarcophilus_harrisii
ENSPVAG00000002820	SF3B5	100	97.917	ENSSFOG00015015767	sf3b5	56	97.917	Scleropages_formosus
ENSPVAG00000002820	SF3B5	100	95.833	ENSSMAG00000018852	sf3b5	56	95.833	Scophthalmus_maximus
ENSPVAG00000002820	SF3B5	100	95.833	ENSSDUG00000018161	sf3b5	56	95.833	Seriola_dumerili
ENSPVAG00000002820	SF3B5	100	95.833	ENSSLDG00000014547	sf3b5	56	95.833	Seriola_lalandi_dorsalis
ENSPVAG00000002820	SF3B5	100	100.000	ENSSARG00000007820	SF3B5	56	100.000	Sorex_araneus
ENSPVAG00000002820	SF3B5	100	95.833	ENSSPAG00000009244	sf3b5	56	95.833	Stegastes_partitus
ENSPVAG00000002820	SF3B5	100	95.833	ENSSPAG00000017371	-	56	95.833	Stegastes_partitus
ENSPVAG00000002820	SF3B5	100	100.000	ENSSSCG00000035578	SF3B5	56	100.000	Sus_scrofa
ENSPVAG00000002820	SF3B5	100	100.000	ENSTGUG00000010810	SF3B5	56	100.000	Taeniopygia_guttata
ENSPVAG00000002820	SF3B5	100	95.833	ENSTRUG00000005577	sf3b5	56	95.833	Takifugu_rubripes
ENSPVAG00000002820	SF3B5	100	95.833	ENSTNIG00000001265	sf3b5	56	95.833	Tetraodon_nigroviridis
ENSPVAG00000002820	SF3B5	100	100.000	ENSTBEG00000003072	SF3B5	56	100.000	Tupaia_belangeri
ENSPVAG00000002820	SF3B5	100	100.000	ENSTTRG00000008817	SF3B5	56	100.000	Tursiops_truncatus
ENSPVAG00000002820	SF3B5	100	100.000	ENSUAMG00000027296	SF3B5	56	100.000	Ursus_americanus
ENSPVAG00000002820	SF3B5	100	100.000	ENSUMAG00000005448	SF3B5	56	100.000	Ursus_maritimus
ENSPVAG00000002820	SF3B5	100	100.000	ENSVPAG00000003826	SF3B5	56	100.000	Vicugna_pacos
ENSPVAG00000002820	SF3B5	100	100.000	ENSVVUG00000004703	SF3B5	56	100.000	Vulpes_vulpes
ENSPVAG00000002820	SF3B5	100	100.000	ENSXETG00000021409	sf3b5	56	100.000	Xenopus_tropicalis
ENSPVAG00000002820	SF3B5	100	95.833	ENSXMAG00000019971	sf3b5	56	95.833	Xiphophorus_maculatus