EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000002854 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 21454 bases
Position: chrGeneScaffold_557:89575-111028
Accession: 105296754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000002694	zf-U11-48K	PF05253.12	1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000002854	SNRNP48-201	1014	XM_011367031	ENSPVAP00000002694	337 (aa)	XP_011365333	UPI00018B26ED

Gene Model

Click here to download ENSPVAG00000002854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000002854's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000002854	SNRNP48	100	91.445	ENSG00000168566	SNRNP48	100	91.445	Homo_sapiens
ENSPVAG00000002854	SNRNP48	81	46.809	ENSAPOG00000021430	snrnp48	83	46.875	Acanthochromis_polyacanthus
ENSPVAG00000002854	SNRNP48	99	88.184	ENSAMEG00000017349	SNRNP48	100	87.032	Ailuropoda_melanoleuca
ENSPVAG00000002854	SNRNP48	82	45.230	ENSACIG00000002032	snrnp48	82	45.230	Amphilophus_citrinellus
ENSPVAG00000002854	SNRNP48	81	46.454	ENSAOCG00000010562	snrnp48	83	46.181	Amphiprion_ocellaris
ENSPVAG00000002854	SNRNP48	81	46.786	ENSAPEG00000003231	snrnp48	83	46.503	Amphiprion_percula
ENSPVAG00000002854	SNRNP48	80	48.214	ENSATEG00000020210	snrnp48	84	48.611	Anabas_testudineus
ENSPVAG00000002854	SNRNP48	83	65.411	ENSACAG00000002811	SNRNP48	89	65.517	Anolis_carolinensis
ENSPVAG00000002854	SNRNP48	100	90.560	ENSANAG00000033538	SNRNP48	100	90.560	Aotus_nancymaae
ENSPVAG00000002854	SNRNP48	93	43.827	ENSAMXG00000015309	snrnp48	85	45.993	Astyanax_mexicanus
ENSPVAG00000002854	SNRNP48	100	85.588	ENSBTAG00000001123	SNRNP48	100	85.882	Bos_taurus
ENSPVAG00000002854	SNRNP48	100	90.855	ENSCJAG00000021330	SNRNP48	100	90.855	Callithrix_jacchus
ENSPVAG00000002854	SNRNP48	99	89.881	ENSCAFG00000009574	SNRNP48	83	89.881	Canis_familiaris
ENSPVAG00000002854	SNRNP48	99	90.179	ENSCAFG00020013203	SNRNP48	99	90.179	Canis_lupus_dingo
ENSPVAG00000002854	SNRNP48	100	87.059	ENSCHIG00000015216	SNRNP48	100	87.353	Capra_hircus
ENSPVAG00000002854	SNRNP48	100	89.676	ENSTSYG00000000698	SNRNP48	100	89.676	Carlito_syrichta
ENSPVAG00000002854	SNRNP48	90	84.641	ENSCAPG00000006768	SNRNP48	92	88.339	Cavia_aperea
ENSPVAG00000002854	SNRNP48	100	87.611	ENSCPOG00000007910	SNRNP48	100	87.611	Cavia_porcellus
ENSPVAG00000002854	SNRNP48	100	89.676	ENSCCAG00000035652	SNRNP48	100	89.676	Cebus_capucinus
ENSPVAG00000002854	SNRNP48	100	90.560	ENSCATG00000033947	SNRNP48	100	90.560	Cercocebus_atys
ENSPVAG00000002854	SNRNP48	100	87.021	ENSCLAG00000003765	SNRNP48	100	87.021	Chinchilla_lanigera
ENSPVAG00000002854	SNRNP48	100	91.150	ENSCSAG00000007409	SNRNP48	100	91.150	Chlorocebus_sabaeus
ENSPVAG00000002854	SNRNP48	85	64.686	ENSCPBG00000019146	SNRNP48	90	65.541	Chrysemys_picta_bellii
ENSPVAG00000002854	SNRNP48	100	91.150	ENSCANG00000030017	SNRNP48	100	91.150	Colobus_angolensis_palliatus
ENSPVAG00000002854	SNRNP48	100	86.431	ENSCGRG00001001076	-	100	86.136	Cricetulus_griseus_chok1gshd
ENSPVAG00000002854	SNRNP48	99	68.955	ENSCGRG00001008805	-	95	68.358	Cricetulus_griseus_chok1gshd
ENSPVAG00000002854	SNRNP48	100	86.431	ENSCGRG00000007781	Snrnp48	100	86.136	Cricetulus_griseus_crigri
ENSPVAG00000002854	SNRNP48	76	48.846	ENSCSEG00000000722	snrnp48	72	48.846	Cynoglossus_semilaevis
ENSPVAG00000002854	SNRNP48	97	40.720	ENSCVAG00000019829	snrnp48	92	41.047	Cyprinodon_variegatus
ENSPVAG00000002854	SNRNP48	81	46.643	ENSDARG00000039989	snrnp48	83	45.329	Danio_rerio
ENSPVAG00000002854	SNRNP48	100	90.000	ENSDNOG00000014978	SNRNP48	100	90.000	Dasypus_novemcinctus
ENSPVAG00000002854	SNRNP48	100	86.471	ENSDORG00000015140	Snrnp48	100	86.000	Dipodomys_ordii
ENSPVAG00000002854	SNRNP48	100	91.740	ENSEASG00005012021	SNRNP48	100	91.740	Equus_asinus_asinus
ENSPVAG00000002854	SNRNP48	100	92.330	ENSECAG00000026937	SNRNP48	100	92.330	Equus_caballus
ENSPVAG00000002854	SNRNP48	100	69.706	ENSEEUG00000015437	SNRNP48	99	69.412	Erinaceus_europaeus
ENSPVAG00000002854	SNRNP48	90	47.604	ENSELUG00000009766	snrnp48	80	48.797	Esox_lucius
ENSPVAG00000002854	SNRNP48	100	92.035	ENSFCAG00000018853	SNRNP48	100	92.035	Felis_catus
ENSPVAG00000002854	SNRNP48	83	64.846	ENSFALG00000007797	SNRNP48	92	64.828	Ficedula_albicollis
ENSPVAG00000002854	SNRNP48	100	87.021	ENSFDAG00000009231	SNRNP48	100	87.021	Fukomys_damarensis
ENSPVAG00000002854	SNRNP48	59	54.229	ENSFHEG00000014647	snrnp48	97	44.595	Fundulus_heteroclitus
ENSPVAG00000002854	SNRNP48	72	48.178	ENSGMOG00000018599	-	86	46.099	Gadus_morhua
ENSPVAG00000002854	SNRNP48	82	63.542	ENSGALG00000013005	SNRNP48	82	67.623	Gallus_gallus
ENSPVAG00000002854	SNRNP48	75	47.893	ENSGAFG00000021639	snrnp48	82	45.704	Gambusia_affinis
ENSPVAG00000002854	SNRNP48	73	48.400	ENSGACG00000017756	-	84	46.154	Gasterosteus_aculeatus
ENSPVAG00000002854	SNRNP48	84	63.787	ENSGAGG00000000865	SNRNP48	96	64.527	Gopherus_agassizii
ENSPVAG00000002854	SNRNP48	100	91.445	ENSGGOG00000013220	SNRNP48	100	91.445	Gorilla_gorilla
ENSPVAG00000002854	SNRNP48	76	48.669	ENSHBUG00000017066	snrnp48	83	46.959	Haplochromis_burtoni
ENSPVAG00000002854	SNRNP48	100	88.791	ENSHGLG00000015241	SNRNP48	100	88.791	Heterocephalus_glaber_female
ENSPVAG00000002854	SNRNP48	100	88.791	ENSHGLG00100010027	SNRNP48	100	88.791	Heterocephalus_glaber_male
ENSPVAG00000002854	SNRNP48	72	46.939	ENSHCOG00000014066	snrnp48	81	44.948	Hippocampus_comes
ENSPVAG00000002854	SNRNP48	100	90.855	ENSSTOG00000014635	SNRNP48	100	93.000	Ictidomys_tridecemlineatus
ENSPVAG00000002854	SNRNP48	100	82.891	ENSJJAG00000011495	Snrnp48	100	82.891	Jaculus_jaculus
ENSPVAG00000002854	SNRNP48	90	44.118	ENSKMAG00000016514	snrnp48	80	46.429	Kryptolebias_marmoratus
ENSPVAG00000002854	SNRNP48	78	48.689	ENSLBEG00000026249	snrnp48	97	42.898	Labrus_bergylta
ENSPVAG00000002854	SNRNP48	96	52.994	ENSLACG00000003958	SNRNP48	98	51.895	Latimeria_chalumnae
ENSPVAG00000002854	SNRNP48	92	47.950	ENSLOCG00000004187	snrnp48	95	48.071	Lepisosteus_oculatus
ENSPVAG00000002854	SNRNP48	100	87.611	ENSLAFG00000011152	SNRNP48	100	87.611	Loxodonta_africana
ENSPVAG00000002854	SNRNP48	100	91.445	ENSMFAG00000045216	SNRNP48	100	91.445	Macaca_fascicularis
ENSPVAG00000002854	SNRNP48	100	91.445	ENSMMUG00000014785	SNRNP48	100	91.445	Macaca_mulatta
ENSPVAG00000002854	SNRNP48	100	91.150	ENSMNEG00000042269	SNRNP48	100	91.150	Macaca_nemestrina
ENSPVAG00000002854	SNRNP48	100	91.445	ENSMLEG00000034004	SNRNP48	100	91.445	Mandrillus_leucophaeus
ENSPVAG00000002854	SNRNP48	76	47.490	ENSMAMG00000018673	snrnp48	71	47.143	Mastacembelus_armatus
ENSPVAG00000002854	SNRNP48	82	64.966	ENSMGAG00000006037	SNRNP48	99	65.068	Meleagris_gallopavo
ENSPVAG00000002854	SNRNP48	100	86.726	ENSMAUG00000011944	Snrnp48	100	86.431	Mesocricetus_auratus
ENSPVAG00000002854	SNRNP48	100	89.381	ENSMICG00000012497	SNRNP48	100	89.381	Microcebus_murinus
ENSPVAG00000002854	SNRNP48	100	86.136	ENSMOCG00000015555	Snrnp48	100	85.841	Microtus_ochrogaster
ENSPVAG00000002854	SNRNP48	54	51.630	ENSMMOG00000003072	-	58	51.630	Mola_mola
ENSPVAG00000002854	SNRNP48	98	70.930	ENSMODG00000009996	SNRNP48	93	70.930	Monodelphis_domestica
ENSPVAG00000002854	SNRNP48	77	50.190	ENSMALG00000005725	snrnp48	80	47.857	Monopterus_albus
ENSPVAG00000002854	SNRNP48	100	85.841	MGP_CAROLIEiJ_G0018441	Snrnp48	100	85.841	Mus_caroli
ENSPVAG00000002854	SNRNP48	100	84.956	ENSMUSG00000021431	Snrnp48	100	84.956	Mus_musculus
ENSPVAG00000002854	SNRNP48	100	84.956	MGP_PahariEiJ_G0019509	Snrnp48	100	84.956	Mus_pahari
ENSPVAG00000002854	SNRNP48	100	84.366	MGP_SPRETEiJ_G0019321	Snrnp48	100	84.366	Mus_spretus
ENSPVAG00000002854	SNRNP48	99	85.503	ENSNGAG00000004849	Snrnp48	99	85.503	Nannospalax_galili
ENSPVAG00000002854	SNRNP48	76	48.669	ENSNBRG00000012127	snrnp48	84	46.959	Neolamprologus_brichardi
ENSPVAG00000002854	SNRNP48	100	91.740	ENSNLEG00000011667	SNRNP48	100	91.740	Nomascus_leucogenys
ENSPVAG00000002854	SNRNP48	95	75.542	ENSOPRG00000015471	SNRNP48	100	75.542	Ochotona_princeps
ENSPVAG00000002854	SNRNP48	76	46.154	ENSONIG00000001520	snrnp48	84	44.710	Oreochromis_niloticus
ENSPVAG00000002854	SNRNP48	57	62.981	ENSOANG00000019888	-	100	63.942	Ornithorhynchus_anatinus
ENSPVAG00000002854	SNRNP48	84	88.811	ENSOCUG00000005168	SNRNP48	100	87.500	Oryctolagus_cuniculus
ENSPVAG00000002854	SNRNP48	88	47.059	ENSORLG00000015654	snrnp48	82	47.569	Oryzias_latipes
ENSPVAG00000002854	SNRNP48	88	46.078	ENSORLG00020015976	snrnp48	70	46.875	Oryzias_latipes_hni
ENSPVAG00000002854	SNRNP48	88	47.059	ENSORLG00015022379	snrnp48	70	47.917	Oryzias_latipes_hsok
ENSPVAG00000002854	SNRNP48	83	45.993	ENSOMEG00000022007	snrnp48	82	46.690	Oryzias_melastigma
ENSPVAG00000002854	SNRNP48	92	89.389	ENSOGAG00000005275	SNRNP48	96	89.590	Otolemur_garnettii
ENSPVAG00000002854	SNRNP48	85	88.502	ENSOARG00000017319	SNRNP48	99	88.693	Ovis_aries
ENSPVAG00000002854	SNRNP48	100	91.740	ENSPPAG00000032873	SNRNP48	100	91.740	Pan_paniscus
ENSPVAG00000002854	SNRNP48	100	92.330	ENSPPRG00000004283	SNRNP48	100	92.330	Panthera_pardus
ENSPVAG00000002854	SNRNP48	85	93.728	ENSPTIG00000013502	SNRNP48	99	93.993	Panthera_tigris_altaica
ENSPVAG00000002854	SNRNP48	100	91.740	ENSPTRG00000017703	SNRNP48	100	91.740	Pan_troglodytes
ENSPVAG00000002854	SNRNP48	100	91.445	ENSPANG00000000771	SNRNP48	100	91.445	Papio_anubis
ENSPVAG00000002854	SNRNP48	94	44.638	ENSPKIG00000013703	snrnp48	59	48.070	Paramormyrops_kingsleyae
ENSPVAG00000002854	SNRNP48	88	62.342	ENSPSIG00000002213	SNRNP48	92	64.505	Pelodiscus_sinensis
ENSPVAG00000002854	SNRNP48	75	46.538	ENSPMGG00000008120	snrnp48	90	46.538	Periophthalmus_magnuspinnatus
ENSPVAG00000002854	SNRNP48	100	86.726	ENSPEMG00000008872	Snrnp48	100	86.598	Peromyscus_maniculatus_bairdii
ENSPVAG00000002854	SNRNP48	75	49.412	ENSPFOG00000003578	snrnp48	82	46.853	Poecilia_formosa
ENSPVAG00000002854	SNRNP48	68	48.927	ENSPLAG00000002290	snrnp48	79	48.498	Poecilia_latipinna
ENSPVAG00000002854	SNRNP48	75	48.627	ENSPMEG00000018033	snrnp48	82	46.154	Poecilia_mexicana
ENSPVAG00000002854	SNRNP48	73	49.200	ENSPREG00000018541	snrnp48	82	46.853	Poecilia_reticulata
ENSPVAG00000002854	SNRNP48	100	90.265	ENSPPYG00000016209	SNRNP48	100	90.265	Pongo_abelii
ENSPVAG00000002854	SNRNP48	78	70.189	ENSPCAG00000011991	SNRNP48	99	70.189	Procavia_capensis
ENSPVAG00000002854	SNRNP48	76	49.049	ENSPNYG00000015399	snrnp48	92	47.297	Pundamilia_nyererei
ENSPVAG00000002854	SNRNP48	100	86.726	ENSRNOG00000013756	Snrnp48	100	86.726	Rattus_norvegicus
ENSPVAG00000002854	SNRNP48	91	90.968	ENSRBIG00000043856	SNRNP48	97	91.447	Rhinopithecus_bieti
ENSPVAG00000002854	SNRNP48	100	91.150	ENSRROG00000043229	SNRNP48	100	91.150	Rhinopithecus_roxellana
ENSPVAG00000002854	SNRNP48	100	90.560	ENSSBOG00000019486	SNRNP48	100	90.560	Saimiri_boliviensis_boliviensis
ENSPVAG00000002854	SNRNP48	98	72.384	ENSSHAG00000014483	SNRNP48	99	72.384	Sarcophilus_harrisii
ENSPVAG00000002854	SNRNP48	73	51.779	ENSSFOG00015006610	snrnp48	69	49.662	Scleropages_formosus
ENSPVAG00000002854	SNRNP48	87	46.622	ENSSDUG00000014953	snrnp48	82	47.552	Seriola_dumerili
ENSPVAG00000002854	SNRNP48	81	47.902	ENSSLDG00000005989	snrnp48	82	46.853	Seriola_lalandi_dorsalis
ENSPVAG00000002854	SNRNP48	84	64.214	ENSSPUG00000006257	SNRNP48	84	64.626	Sphenodon_punctatus
ENSPVAG00000002854	SNRNP48	80	47.122	ENSSPAG00000006454	snrnp48	80	47.670	Stegastes_partitus
ENSPVAG00000002854	SNRNP48	83	63.918	ENSTGUG00000007575	SNRNP48	92	63.889	Taeniopygia_guttata
ENSPVAG00000002854	SNRNP48	73	50.400	ENSTRUG00000007031	snrnp48	82	49.110	Takifugu_rubripes
ENSPVAG00000002854	SNRNP48	73	45.200	ENSTNIG00000012977	-	74	45.020	Tetraodon_nigroviridis
ENSPVAG00000002854	SNRNP48	100	72.566	ENSTBEG00000015620	SNRNP48	100	72.566	Tupaia_belangeri
ENSPVAG00000002854	SNRNP48	100	91.150	ENSTTRG00000016715	SNRNP48	100	91.150	Tursiops_truncatus
ENSPVAG00000002854	SNRNP48	100	90.855	ENSUAMG00000003690	SNRNP48	100	89.676	Ursus_americanus
ENSPVAG00000002854	SNRNP48	85	87.805	ENSVPAG00000003557	SNRNP48	99	87.633	Vicugna_pacos
ENSPVAG00000002854	SNRNP48	99	90.179	ENSVVUG00000004996	SNRNP48	99	90.179	Vulpes_vulpes
ENSPVAG00000002854	SNRNP48	85	53.846	ENSXETG00000020447	snrnp48	97	50.294	Xenopus_tropicalis
ENSPVAG00000002854	SNRNP48	69	48.291	ENSXCOG00000004478	snrnp48	71	48.291	Xiphophorus_couchianus
ENSPVAG00000002854	SNRNP48	83	47.350	ENSXMAG00000013595	snrnp48	83	43.030	Xiphophorus_maculatus