EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000003195 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 12970 bases
Position: chrGeneScaffold_3588:158747-171716
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000003017	zf-C3HC	PF07967.13	1.2e-36	1	1
ENSPVAP00000003017	Rsm1	PF08600.10	2e-12	1	2
ENSPVAP00000003017	Rsm1	PF08600.10	2e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000003197	ZC3HC1-201	1494	-	ENSPVAP00000003017	497 (aa)	-	UPI00018B3176

Gene Model

Click here to download ENSPVAG00000003195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000003195's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000003195	ZC3HC1	99	85.230	ENSG00000091732	ZC3HC1	99	85.429	Homo_sapiens
ENSPVAG00000003195	ZC3HC1	95	41.667	ENSAPOG00000009078	zc3hc1	95	41.429	Acanthochromis_polyacanthus
ENSPVAG00000003195	ZC3HC1	100	84.524	ENSAMEG00000005425	ZC3HC1	100	84.921	Ailuropoda_melanoleuca
ENSPVAG00000003195	ZC3HC1	95	40.606	ENSACIG00000019513	zc3hc1	95	40.524	Amphilophus_citrinellus
ENSPVAG00000003195	ZC3HC1	95	42.770	ENSAOCG00000024310	zc3hc1	95	42.449	Amphiprion_ocellaris
ENSPVAG00000003195	ZC3HC1	95	42.770	ENSAPEG00000004907	zc3hc1	95	42.449	Amphiprion_percula
ENSPVAG00000003195	ZC3HC1	81	45.346	ENSATEG00000016898	zc3hc1	85	44.762	Anabas_testudineus
ENSPVAG00000003195	ZC3HC1	88	56.629	ENSAPLG00000003832	ZC3HC1	99	56.098	Anas_platyrhynchos
ENSPVAG00000003195	ZC3HC1	95	59.381	ENSACAG00000001638	ZC3HC1	95	58.402	Anolis_carolinensis
ENSPVAG00000003195	ZC3HC1	100	83.698	ENSANAG00000022213	ZC3HC1	99	88.780	Aotus_nancymaae
ENSPVAG00000003195	ZC3HC1	88	41.595	ENSACLG00000025033	zc3hc1	98	41.342	Astatotilapia_calliptera
ENSPVAG00000003195	ZC3HC1	94	41.545	ENSAMXG00000036792	zc3hc1	97	41.350	Astyanax_mexicanus
ENSPVAG00000003195	ZC3HC1	100	83.865	ENSBTAG00000011247	ZC3HC1	100	84.064	Bos_taurus
ENSPVAG00000003195	ZC3HC1	100	85.060	ENSCJAG00000010536	ZC3HC1	99	88.780	Callithrix_jacchus
ENSPVAG00000003195	ZC3HC1	100	84.861	ENSCAFG00000029401	-	99	84.861	Canis_familiaris
ENSPVAG00000003195	ZC3HC1	100	84.861	ENSCAFG00000028735	-	100	84.861	Canis_familiaris
ENSPVAG00000003195	ZC3HC1	100	84.752	ENSCAFG00000001499	-	99	84.752	Canis_familiaris
ENSPVAG00000003195	ZC3HC1	100	84.861	ENSCAFG00000031850	-	100	84.861	Canis_familiaris
ENSPVAG00000003195	ZC3HC1	100	84.661	ENSCAFG00020006829	-	100	84.661	Canis_lupus_dingo
ENSPVAG00000003195	ZC3HC1	100	83.730	ENSCAFG00020023333	-	100	83.730	Canis_lupus_dingo
ENSPVAG00000003195	ZC3HC1	100	77.490	ENSCHIG00000014103	ZC3HC1	100	77.689	Capra_hircus
ENSPVAG00000003195	ZC3HC1	100	82.470	ENSTSYG00000002843	ZC3HC1	100	82.669	Carlito_syrichta
ENSPVAG00000003195	ZC3HC1	90	65.708	ENSCAPG00000016300	ZC3HC1	100	62.749	Cavia_aperea
ENSPVAG00000003195	ZC3HC1	100	79.084	ENSCPOG00000014034	ZC3HC1	100	78.486	Cavia_porcellus
ENSPVAG00000003195	ZC3HC1	100	67.864	ENSCCAG00000020384	ZC3HC1	100	89.427	Cebus_capucinus
ENSPVAG00000003195	ZC3HC1	100	85.259	ENSCATG00000023130	ZC3HC1	100	85.458	Cercocebus_atys
ENSPVAG00000003195	ZC3HC1	100	60.120	ENSCLAG00000008260	ZC3HC1	100	59.600	Chinchilla_lanigera
ENSPVAG00000003195	ZC3HC1	73	83.333	ENSCSAG00000009881	ZC3HC1	97	83.607	Chlorocebus_sabaeus
ENSPVAG00000003195	ZC3HC1	90	85.144	ENSCHOG00000011846	ZC3HC1	99	84.257	Choloepus_hoffmanni
ENSPVAG00000003195	ZC3HC1	96	63.786	ENSCPBG00000017519	ZC3HC1	99	63.581	Chrysemys_picta_bellii
ENSPVAG00000003195	ZC3HC1	100	85.259	ENSCANG00000029091	ZC3HC1	99	88.780	Colobus_angolensis_palliatus
ENSPVAG00000003195	ZC3HC1	100	81.673	ENSCGRG00001018805	Zc3hc1	100	80.677	Cricetulus_griseus_chok1gshd
ENSPVAG00000003195	ZC3HC1	100	80.478	ENSCGRG00000017114	Zc3hc1	100	79.482	Cricetulus_griseus_crigri
ENSPVAG00000003195	ZC3HC1	94	41.104	ENSCSEG00000009284	zc3hc1	94	40.162	Cynoglossus_semilaevis
ENSPVAG00000003195	ZC3HC1	95	40.404	ENSCVAG00000011566	zc3hc1	95	39.554	Cyprinodon_variegatus
ENSPVAG00000003195	ZC3HC1	95	44.008	ENSDARG00000062651	zc3hc1	95	43.595	Danio_rerio
ENSPVAG00000003195	ZC3HC1	100	85.259	ENSDNOG00000045016	ZC3HC1	100	83.865	Dasypus_novemcinctus
ENSPVAG00000003195	ZC3HC1	100	73.108	ENSDORG00000008697	Zc3hc1	100	73.108	Dipodomys_ordii
ENSPVAG00000003195	ZC3HC1	90	85.841	ENSEASG00005008789	ZC3HC1	97	86.062	Equus_asinus_asinus
ENSPVAG00000003195	ZC3HC1	100	86.282	ENSECAG00000017886	ZC3HC1	100	86.481	Equus_caballus
ENSPVAG00000003195	ZC3HC1	81	82.716	ENSEEUG00000003123	ZC3HC1	81	82.716	Erinaceus_europaeus
ENSPVAG00000003195	ZC3HC1	94	41.582	ENSELUG00000023168	zc3hc1	94	41.532	Esox_lucius
ENSPVAG00000003195	ZC3HC1	100	84.661	ENSFCAG00000010429	ZC3HC1	100	85.060	Felis_catus
ENSPVAG00000003195	ZC3HC1	90	56.476	ENSFALG00000005006	ZC3HC1	100	56.838	Ficedula_albicollis
ENSPVAG00000003195	ZC3HC1	100	81.474	ENSFDAG00000019897	ZC3HC1	100	81.673	Fukomys_damarensis
ENSPVAG00000003195	ZC3HC1	96	41.129	ENSFHEG00000020149	zc3hc1	99	39.571	Fundulus_heteroclitus
ENSPVAG00000003195	ZC3HC1	94	38.843	ENSGMOG00000002914	zc3hc1	95	38.703	Gadus_morhua
ENSPVAG00000003195	ZC3HC1	97	60.569	ENSGALG00000008003	ZC3HC1	99	59.553	Gallus_gallus
ENSPVAG00000003195	ZC3HC1	95	41.273	ENSGAFG00000016095	zc3hc1	95	41.068	Gambusia_affinis
ENSPVAG00000003195	ZC3HC1	94	41.736	ENSGACG00000019706	zc3hc1	95	41.529	Gasterosteus_aculeatus
ENSPVAG00000003195	ZC3HC1	77	63.939	ENSGAGG00000016106	ZC3HC1	100	63.939	Gopherus_agassizii
ENSPVAG00000003195	ZC3HC1	99	85.429	ENSGGOG00000015504	ZC3HC1	98	89.216	Gorilla_gorilla
ENSPVAG00000003195	ZC3HC1	95	40.244	ENSHBUG00000008347	zc3hc1	95	40.000	Haplochromis_burtoni
ENSPVAG00000003195	ZC3HC1	100	81.873	ENSHGLG00000005085	ZC3HC1	100	82.072	Heterocephalus_glaber_female
ENSPVAG00000003195	ZC3HC1	100	81.673	ENSHGLG00100011395	ZC3HC1	100	81.873	Heterocephalus_glaber_male
ENSPVAG00000003195	ZC3HC1	95	39.709	ENSHCOG00000014309	zc3hc1	95	41.372	Hippocampus_comes
ENSPVAG00000003195	ZC3HC1	100	83.665	ENSSTOG00000023599	-	100	83.267	Ictidomys_tridecemlineatus
ENSPVAG00000003195	ZC3HC1	94	42.094	ENSKMAG00000015315	zc3hc1	88	41.443	Kryptolebias_marmoratus
ENSPVAG00000003195	ZC3HC1	95	40.726	ENSLBEG00000017325	zc3hc1	95	40.606	Labrus_bergylta
ENSPVAG00000003195	ZC3HC1	79	52.174	ENSLACG00000013032	ZC3HC1	98	50.483	Latimeria_chalumnae
ENSPVAG00000003195	ZC3HC1	99	49.405	ENSLOCG00000015963	zc3hc1	99	49.505	Lepisosteus_oculatus
ENSPVAG00000003195	ZC3HC1	100	82.411	ENSLAFG00000001292	ZC3HC1	100	82.213	Loxodonta_africana
ENSPVAG00000003195	ZC3HC1	100	85.458	ENSMFAG00000030176	ZC3HC1	100	85.657	Macaca_fascicularis
ENSPVAG00000003195	ZC3HC1	100	84.294	ENSMMUG00000006155	ZC3HC1	100	84.493	Macaca_mulatta
ENSPVAG00000003195	ZC3HC1	100	85.657	ENSMNEG00000011833	ZC3HC1	100	90.566	Macaca_nemestrina
ENSPVAG00000003195	ZC3HC1	100	85.458	ENSMLEG00000027328	ZC3HC1	99	88.780	Mandrillus_leucophaeus
ENSPVAG00000003195	ZC3HC1	95	41.988	ENSMAMG00000010691	zc3hc1	95	41.785	Mastacembelus_armatus
ENSPVAG00000003195	ZC3HC1	95	40.447	ENSMZEG00005007142	zc3hc1	95	40.204	Maylandia_zebra
ENSPVAG00000003195	ZC3HC1	96	60.041	ENSMGAG00000002977	ZC3HC1	97	59.026	Meleagris_gallopavo
ENSPVAG00000003195	ZC3HC1	81	73.735	ENSMAUG00000017032	Zc3hc1	92	73.494	Mesocricetus_auratus
ENSPVAG00000003195	ZC3HC1	100	83.665	ENSMICG00000009167	ZC3HC1	100	83.865	Microcebus_murinus
ENSPVAG00000003195	ZC3HC1	100	79.681	ENSMOCG00000015239	Zc3hc1	100	79.681	Microtus_ochrogaster
ENSPVAG00000003195	ZC3HC1	85	39.551	ENSMMOG00000002204	zc3hc1	98	39.551	Mola_mola
ENSPVAG00000003195	ZC3HC1	100	60.000	ENSMODG00000014630	ZC3HC1	100	58.077	Monodelphis_domestica
ENSPVAG00000003195	ZC3HC1	94	40.491	ENSMALG00000014447	zc3hc1	95	40.447	Monopterus_albus
ENSPVAG00000003195	ZC3HC1	100	80.439	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	80.040	Mus_caroli
ENSPVAG00000003195	ZC3HC1	100	80.279	ENSMUSG00000039130	Zc3hc1	100	80.080	Mus_musculus
ENSPVAG00000003195	ZC3HC1	100	75.299	MGP_PahariEiJ_G0021941	Zc3hc1	100	74.104	Mus_pahari
ENSPVAG00000003195	ZC3HC1	100	80.279	MGP_SPRETEiJ_G0029183	Zc3hc1	100	80.080	Mus_spretus
ENSPVAG00000003195	ZC3HC1	95	83.299	ENSMPUG00000005297	ZC3HC1	95	83.716	Mustela_putorius_furo
ENSPVAG00000003195	ZC3HC1	67	76.968	ENSMLUG00000029228	-	99	76.968	Myotis_lucifugus
ENSPVAG00000003195	ZC3HC1	100	84.158	ENSMLUG00000000063	-	100	84.158	Myotis_lucifugus
ENSPVAG00000003195	ZC3HC1	100	81.312	ENSNGAG00000019014	Zc3hc1	100	80.915	Nannospalax_galili
ENSPVAG00000003195	ZC3HC1	95	40.326	ENSNBRG00000004577	zc3hc1	95	40.082	Neolamprologus_brichardi
ENSPVAG00000003195	ZC3HC1	99	83.832	ENSNLEG00000012698	ZC3HC1	99	84.032	Nomascus_leucogenys
ENSPVAG00000003195	ZC3HC1	100	75.299	ENSMEUG00000011023	ZC3HC1	100	74.104	Notamacropus_eugenii
ENSPVAG00000003195	ZC3HC1	63	76.923	ENSOPRG00000007867	-	65	76.518	Ochotona_princeps
ENSPVAG00000003195	ZC3HC1	100	79.880	ENSODEG00000014604	ZC3HC1	100	79.681	Octodon_degus
ENSPVAG00000003195	ZC3HC1	95	40.937	ENSONIG00000011644	zc3hc1	95	40.695	Oreochromis_niloticus
ENSPVAG00000003195	ZC3HC1	90	64.224	ENSOANG00000011460	ZC3HC1	100	62.931	Ornithorhynchus_anatinus
ENSPVAG00000003195	ZC3HC1	100	78.416	ENSOCUG00000017137	ZC3HC1	100	78.812	Oryctolagus_cuniculus
ENSPVAG00000003195	ZC3HC1	95	40.408	ENSORLG00000014409	zc3hc1	94	40.164	Oryzias_latipes
ENSPVAG00000003195	ZC3HC1	95	40.612	ENSORLG00020015874	zc3hc1	94	40.369	Oryzias_latipes_hni
ENSPVAG00000003195	ZC3HC1	95	40.408	ENSORLG00015014641	zc3hc1	94	40.164	Oryzias_latipes_hsok
ENSPVAG00000003195	ZC3HC1	94	42.259	ENSOMEG00000020604	zc3hc1	94	41.104	Oryzias_melastigma
ENSPVAG00000003195	ZC3HC1	94	42.316	ENSOMEG00000000215	zc3hc1	93	42.072	Oryzias_melastigma
ENSPVAG00000003195	ZC3HC1	100	78.486	ENSOGAG00000026193	ZC3HC1	100	78.685	Otolemur_garnettii
ENSPVAG00000003195	ZC3HC1	100	84.554	ENSOARG00000004907	ZC3HC1	99	84.752	Ovis_aries
ENSPVAG00000003195	ZC3HC1	99	85.230	ENSPPAG00000043172	ZC3HC1	98	89.216	Pan_paniscus
ENSPVAG00000003195	ZC3HC1	100	83.865	ENSPPRG00000001004	ZC3HC1	100	84.263	Panthera_pardus
ENSPVAG00000003195	ZC3HC1	100	84.462	ENSPTIG00000007823	ZC3HC1	100	84.861	Panthera_tigris_altaica
ENSPVAG00000003195	ZC3HC1	99	85.030	ENSPTRG00000019685	ZC3HC1	98	89.216	Pan_troglodytes
ENSPVAG00000003195	ZC3HC1	100	84.095	ENSPANG00000014229	ZC3HC1	99	88.780	Papio_anubis
ENSPVAG00000003195	ZC3HC1	95	46.901	ENSPKIG00000007172	zc3hc1	97	45.714	Paramormyrops_kingsleyae
ENSPVAG00000003195	ZC3HC1	95	57.819	ENSPSIG00000016646	ZC3HC1	100	56.725	Pelodiscus_sinensis
ENSPVAG00000003195	ZC3HC1	95	38.384	ENSPMGG00000003548	zc3hc1	96	38.540	Periophthalmus_magnuspinnatus
ENSPVAG00000003195	ZC3HC1	100	79.482	ENSPEMG00000000514	Zc3hc1	100	80.080	Peromyscus_maniculatus_bairdii
ENSPVAG00000003195	ZC3HC1	99	72.455	ENSPCIG00000020619	ZC3HC1	100	73.265	Phascolarctos_cinereus
ENSPVAG00000003195	ZC3HC1	95	40.900	ENSPFOG00000003466	zc3hc1	95	40.612	Poecilia_formosa
ENSPVAG00000003195	ZC3HC1	95	39.877	ENSPLAG00000022211	zc3hc1	95	40.246	Poecilia_latipinna
ENSPVAG00000003195	ZC3HC1	95	40.947	ENSPMEG00000001458	zc3hc1	95	40.657	Poecilia_mexicana
ENSPVAG00000003195	ZC3HC1	95	40.657	ENSPREG00000004004	zc3hc1	95	40.452	Poecilia_reticulata
ENSPVAG00000003195	ZC3HC1	99	77.137	ENSPPYG00000017998	ZC3HC1	99	77.336	Pongo_abelii
ENSPVAG00000003195	ZC3HC1	92	78.261	ENSPCAG00000001182	ZC3HC1	100	78.261	Procavia_capensis
ENSPVAG00000003195	ZC3HC1	100	84.661	ENSPCOG00000017354	ZC3HC1	100	84.661	Propithecus_coquereli
ENSPVAG00000003195	ZC3HC1	95	40.447	ENSPNYG00000020692	zc3hc1	95	40.204	Pundamilia_nyererei
ENSPVAG00000003195	ZC3HC1	93	42.437	ENSPNAG00000020746	zc3hc1	95	41.004	Pygocentrus_nattereri
ENSPVAG00000003195	ZC3HC1	100	80.716	ENSRNOG00000010154	Zc3hc1	100	79.722	Rattus_norvegicus
ENSPVAG00000003195	ZC3HC1	90	85.210	ENSRBIG00000029409	ZC3HC1	100	89.623	Rhinopithecus_bieti
ENSPVAG00000003195	ZC3HC1	100	85.259	ENSRROG00000041831	ZC3HC1	99	88.293	Rhinopithecus_roxellana
ENSPVAG00000003195	ZC3HC1	82	86.765	ENSSBOG00000032787	ZC3HC1	99	88.780	Saimiri_boliviensis_boliviensis
ENSPVAG00000003195	ZC3HC1	92	75.699	ENSSHAG00000002529	ZC3HC1	100	74.409	Sarcophilus_harrisii
ENSPVAG00000003195	ZC3HC1	95	47.835	ENSSFOG00015003667	zc3hc1	91	47.216	Scleropages_formosus
ENSPVAG00000003195	ZC3HC1	95	41.260	ENSSMAG00000000647	zc3hc1	86	41.548	Scophthalmus_maximus
ENSPVAG00000003195	ZC3HC1	95	42.245	ENSSDUG00000004241	zc3hc1	93	41.837	Seriola_dumerili
ENSPVAG00000003195	ZC3HC1	95	42.041	ENSSLDG00000025056	zc3hc1	93	41.837	Seriola_lalandi_dorsalis
ENSPVAG00000003195	ZC3HC1	99	73.054	ENSSARG00000012013	ZC3HC1	99	73.054	Sorex_araneus
ENSPVAG00000003195	ZC3HC1	86	55.172	ENSSPUG00000000778	ZC3HC1	86	54.253	Sphenodon_punctatus
ENSPVAG00000003195	ZC3HC1	95	42.857	ENSSPAG00000020041	zc3hc1	95	42.653	Stegastes_partitus
ENSPVAG00000003195	ZC3HC1	100	84.661	ENSSSCG00000016565	ZC3HC1	100	84.661	Sus_scrofa
ENSPVAG00000003195	ZC3HC1	98	39.961	ENSTRUG00000020077	zc3hc1	99	39.250	Takifugu_rubripes
ENSPVAG00000003195	ZC3HC1	94	41.372	ENSTNIG00000007585	zc3hc1	99	40.956	Tetraodon_nigroviridis
ENSPVAG00000003195	ZC3HC1	99	74.651	ENSTBEG00000005216	ZC3HC1	99	74.651	Tupaia_belangeri
ENSPVAG00000003195	ZC3HC1	95	85.208	ENSTTRG00000008458	ZC3HC1	100	84.583	Tursiops_truncatus
ENSPVAG00000003195	ZC3HC1	100	85.060	ENSUAMG00000020249	ZC3HC1	100	85.259	Ursus_americanus
ENSPVAG00000003195	ZC3HC1	100	84.661	ENSUMAG00000009268	ZC3HC1	100	85.060	Ursus_maritimus
ENSPVAG00000003195	ZC3HC1	77	89.796	ENSVPAG00000010846	ZC3HC1	77	89.796	Vicugna_pacos
ENSPVAG00000003195	ZC3HC1	96	84.375	ENSVVUG00000012386	ZC3HC1	99	84.375	Vulpes_vulpes
ENSPVAG00000003195	ZC3HC1	91	48.941	ENSXETG00000033900	zc3hc1	95	48.305	Xenopus_tropicalis
ENSPVAG00000003195	ZC3HC1	95	40.452	ENSXCOG00000013570	zc3hc1	95	40.246	Xiphophorus_couchianus
ENSPVAG00000003195	ZC3HC1	87	42.129	ENSXMAG00000010979	zc3hc1	94	41.907	Xiphophorus_maculatus