EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000003372 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 5370 bases
Position: chrGeneScaffold_375:678337-683706
Accession: 17286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000003186	EXOSC1	PF10447.9	3.2e-15	1	1
ENSPVAP00000003186	ECR1_N	PF14382.6	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000003372	EXOSC1-201	588	-	ENSPVAP00000003186	195 (aa)	-	UPI00018B4E5C

Gene Model

Click here to download ENSPVAG00000003372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000003372's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000003372	EXOSC1	100	97.436	ENSG00000171311	EXOSC1	100	97.436	Homo_sapiens
ENSPVAG00000003372	EXOSC1	98	80.105	ENSAPOG00000007822	exosc1	98	80.105	Acanthochromis_polyacanthus
ENSPVAG00000003372	EXOSC1	100	98.974	ENSAMEG00000000129	EXOSC1	100	98.974	Ailuropoda_melanoleuca
ENSPVAG00000003372	EXOSC1	96	79.787	ENSACIG00000018956	exosc1	92	79.787	Amphilophus_citrinellus
ENSPVAG00000003372	EXOSC1	98	80.105	ENSAOCG00000010699	exosc1	98	80.105	Amphiprion_ocellaris
ENSPVAG00000003372	EXOSC1	92	70.950	ENSAPEG00000012690	exosc1	96	70.950	Amphiprion_percula
ENSPVAG00000003372	EXOSC1	98	79.581	ENSATEG00000018683	exosc1	98	79.581	Anabas_testudineus
ENSPVAG00000003372	EXOSC1	99	84.974	ENSACAG00000002101	EXOSC1	99	84.974	Anolis_carolinensis
ENSPVAG00000003372	EXOSC1	100	98.974	ENSANAG00000034669	EXOSC1	100	98.974	Aotus_nancymaae
ENSPVAG00000003372	EXOSC1	98	80.105	ENSACLG00000021243	exosc1	98	80.105	Astatotilapia_calliptera
ENSPVAG00000003372	EXOSC1	98	81.675	ENSAMXG00000011116	exosc1	98	81.675	Astyanax_mexicanus
ENSPVAG00000003372	EXOSC1	100	98.462	ENSBTAG00000012699	EXOSC1	100	98.462	Bos_taurus
ENSPVAG00000003372	EXOSC1	92	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSPVAG00000003372	EXOSC1	100	98.462	ENSCJAG00000016586	EXOSC1	100	98.462	Callithrix_jacchus
ENSPVAG00000003372	EXOSC1	100	98.462	ENSCAFG00000009068	EXOSC1	94	98.462	Canis_familiaris
ENSPVAG00000003372	EXOSC1	100	98.462	ENSCAFG00020006002	EXOSC1	94	98.462	Canis_lupus_dingo
ENSPVAG00000003372	EXOSC1	100	98.462	ENSCHIG00000015253	EXOSC1	100	98.462	Capra_hircus
ENSPVAG00000003372	EXOSC1	100	97.949	ENSTSYG00000000760	EXOSC1	100	97.949	Carlito_syrichta
ENSPVAG00000003372	EXOSC1	100	98.462	ENSCPOG00000001173	EXOSC1	100	98.462	Cavia_porcellus
ENSPVAG00000003372	EXOSC1	100	56.345	ENSCCAG00000023986	EXOSC1	100	56.345	Cebus_capucinus
ENSPVAG00000003372	EXOSC1	100	97.436	ENSCATG00000034114	EXOSC1	100	97.436	Cercocebus_atys
ENSPVAG00000003372	EXOSC1	100	98.974	ENSCLAG00000002463	EXOSC1	100	98.974	Chinchilla_lanigera
ENSPVAG00000003372	EXOSC1	100	96.923	ENSCSAG00000005870	EXOSC1	100	96.923	Chlorocebus_sabaeus
ENSPVAG00000003372	EXOSC1	96	83.957	ENSCHOG00000006477	EXOSC1	100	83.957	Choloepus_hoffmanni
ENSPVAG00000003372	EXOSC1	54	81.132	ENSCPBG00000011949	EXOSC1	88	81.132	Chrysemys_picta_bellii
ENSPVAG00000003372	EXOSC1	95	56.150	ENSCING00000022734	-	89	56.150	Ciona_intestinalis
ENSPVAG00000003372	EXOSC1	95	57.754	ENSCSAVG00000010865	-	95	57.754	Ciona_savignyi
ENSPVAG00000003372	EXOSC1	100	97.436	ENSCANG00000034159	EXOSC1	100	97.436	Colobus_angolensis_palliatus
ENSPVAG00000003372	EXOSC1	100	97.436	ENSCGRG00001000335	Exosc1	100	97.436	Cricetulus_griseus_chok1gshd
ENSPVAG00000003372	EXOSC1	100	97.436	ENSCGRG00000011602	Exosc1	100	97.436	Cricetulus_griseus_crigri
ENSPVAG00000003372	EXOSC1	98	67.539	ENSCSEG00000007895	exosc1	95	67.539	Cynoglossus_semilaevis
ENSPVAG00000003372	EXOSC1	98	76.440	ENSCVAG00000016748	exosc1	98	76.440	Cyprinodon_variegatus
ENSPVAG00000003372	EXOSC1	98	80.628	ENSDARG00000059841	exosc1	98	80.628	Danio_rerio
ENSPVAG00000003372	EXOSC1	75	98.649	ENSDNOG00000007983	EXOSC1	100	98.649	Dasypus_novemcinctus
ENSPVAG00000003372	EXOSC1	100	97.949	ENSDORG00000016528	Exosc1	100	97.949	Dipodomys_ordii
ENSPVAG00000003372	EXOSC1	94	48.677	FBgn0032346	Csl4	92	48.677	Drosophila_melanogaster
ENSPVAG00000003372	EXOSC1	100	95.897	ENSETEG00000002469	-	100	95.897	Echinops_telfairi
ENSPVAG00000003372	EXOSC1	99	62.245	ENSEBUG00000008164	exosc1	98	62.245	Eptatretus_burgeri
ENSPVAG00000003372	EXOSC1	100	88.205	ENSEASG00005008684	EXOSC1	100	88.205	Equus_asinus_asinus
ENSPVAG00000003372	EXOSC1	61	78.151	ENSECAG00000010621	EXOSC1	71	78.151	Equus_caballus
ENSPVAG00000003372	EXOSC1	100	97.949	ENSEEUG00000005647	EXOSC1	100	97.949	Erinaceus_europaeus
ENSPVAG00000003372	EXOSC1	94	80.978	ENSELUG00000017369	exosc1	81	80.978	Esox_lucius
ENSPVAG00000003372	EXOSC1	100	98.974	ENSFCAG00000040563	EXOSC1	94	98.974	Felis_catus
ENSPVAG00000003372	EXOSC1	100	83.077	ENSFALG00000008450	EXOSC1	100	83.077	Ficedula_albicollis
ENSPVAG00000003372	EXOSC1	100	98.974	ENSFDAG00000000846	EXOSC1	100	98.974	Fukomys_damarensis
ENSPVAG00000003372	EXOSC1	98	76.440	ENSFHEG00000009154	exosc1	98	76.440	Fundulus_heteroclitus
ENSPVAG00000003372	EXOSC1	98	80.105	ENSGMOG00000008993	exosc1	98	80.105	Gadus_morhua
ENSPVAG00000003372	EXOSC1	100	72.308	ENSGALG00000039917	EXOSC1	100	86.986	Gallus_gallus
ENSPVAG00000003372	EXOSC1	98	76.440	ENSGAFG00000010265	exosc1	94	76.440	Gambusia_affinis
ENSPVAG00000003372	EXOSC1	98	80.105	ENSGACG00000018936	exosc1	98	80.105	Gasterosteus_aculeatus
ENSPVAG00000003372	EXOSC1	100	84.615	ENSGAGG00000019192	EXOSC1	100	84.615	Gopherus_agassizii
ENSPVAG00000003372	EXOSC1	100	84.615	ENSGGOG00000003099	EXOSC1	100	84.615	Gorilla_gorilla
ENSPVAG00000003372	EXOSC1	98	80.105	ENSHBUG00000017857	exosc1	98	80.105	Haplochromis_burtoni
ENSPVAG00000003372	EXOSC1	100	98.462	ENSHGLG00000016927	EXOSC1	100	98.462	Heterocephalus_glaber_female
ENSPVAG00000003372	EXOSC1	100	98.462	ENSHGLG00100012208	EXOSC1	100	98.462	Heterocephalus_glaber_male
ENSPVAG00000003372	EXOSC1	98	79.058	ENSHCOG00000019882	exosc1	98	79.058	Hippocampus_comes
ENSPVAG00000003372	EXOSC1	98	80.628	ENSIPUG00000007685	exosc1	98	80.628	Ictalurus_punctatus
ENSPVAG00000003372	EXOSC1	63	83.607	ENSSTOG00000029860	-	93	83.607	Ictidomys_tridecemlineatus
ENSPVAG00000003372	EXOSC1	100	98.974	ENSSTOG00000006615	EXOSC1	100	98.974	Ictidomys_tridecemlineatus
ENSPVAG00000003372	EXOSC1	100	97.949	ENSJJAG00000013311	Exosc1	100	97.949	Jaculus_jaculus
ENSPVAG00000003372	EXOSC1	98	78.125	ENSKMAG00000001202	exosc1	81	78.125	Kryptolebias_marmoratus
ENSPVAG00000003372	EXOSC1	98	79.581	ENSLBEG00000011448	exosc1	98	79.581	Labrus_bergylta
ENSPVAG00000003372	EXOSC1	98	59.091	ENSLOCG00000003776	exosc1	99	59.091	Lepisosteus_oculatus
ENSPVAG00000003372	EXOSC1	100	97.949	ENSLAFG00000015983	EXOSC1	100	97.949	Loxodonta_africana
ENSPVAG00000003372	EXOSC1	100	97.436	ENSMFAG00000001493	EXOSC1	100	97.436	Macaca_fascicularis
ENSPVAG00000003372	EXOSC1	100	97.436	ENSMMUG00000020028	EXOSC1	100	90.452	Macaca_mulatta
ENSPVAG00000003372	EXOSC1	100	97.436	ENSMNEG00000029816	EXOSC1	100	97.436	Macaca_nemestrina
ENSPVAG00000003372	EXOSC1	100	91.795	ENSMLEG00000027643	EXOSC1	100	91.795	Mandrillus_leucophaeus
ENSPVAG00000003372	EXOSC1	98	80.628	ENSMAMG00000012200	exosc1	98	80.628	Mastacembelus_armatus
ENSPVAG00000003372	EXOSC1	98	80.105	ENSMZEG00005007042	exosc1	98	80.105	Maylandia_zebra
ENSPVAG00000003372	EXOSC1	100	85.128	ENSMAUG00000020462	-	100	85.128	Mesocricetus_auratus
ENSPVAG00000003372	EXOSC1	100	98.462	ENSMICG00000007664	EXOSC1	92	98.462	Microcebus_murinus
ENSPVAG00000003372	EXOSC1	100	97.436	ENSMOCG00000006004	-	100	97.436	Microtus_ochrogaster
ENSPVAG00000003372	EXOSC1	97	91.053	ENSMOCG00000017124	-	97	91.053	Microtus_ochrogaster
ENSPVAG00000003372	EXOSC1	99	60.309	ENSMMOG00000021403	exosc1	99	60.309	Mola_mola
ENSPVAG00000003372	EXOSC1	100	92.347	ENSMODG00000004213	EXOSC1	100	92.347	Monodelphis_domestica
ENSPVAG00000003372	EXOSC1	94	80.978	ENSMALG00000007061	exosc1	92	80.978	Monopterus_albus
ENSPVAG00000003372	EXOSC1	100	96.923	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.923	Mus_caroli
ENSPVAG00000003372	EXOSC1	100	96.410	ENSMUSG00000034321	Exosc1	100	96.410	Mus_musculus
ENSPVAG00000003372	EXOSC1	100	97.436	MGP_PahariEiJ_G0014449	Exosc1	100	97.436	Mus_pahari
ENSPVAG00000003372	EXOSC1	100	96.923	MGP_SPRETEiJ_G0023880	Exosc1	100	96.923	Mus_spretus
ENSPVAG00000003372	EXOSC1	100	98.974	ENSMPUG00000017044	EXOSC1	100	98.974	Mustela_putorius_furo
ENSPVAG00000003372	EXOSC1	100	99.487	ENSMLUG00000009228	EXOSC1	100	99.487	Myotis_lucifugus
ENSPVAG00000003372	EXOSC1	100	96.410	ENSNGAG00000022033	Exosc1	100	96.410	Nannospalax_galili
ENSPVAG00000003372	EXOSC1	98	60.733	ENSNBRG00000024007	exosc1	97	60.733	Neolamprologus_brichardi
ENSPVAG00000003372	EXOSC1	100	96.923	ENSNLEG00000013872	EXOSC1	100	96.923	Nomascus_leucogenys
ENSPVAG00000003372	EXOSC1	59	90.435	ENSMEUG00000002246	EXOSC1	100	90.435	Notamacropus_eugenii
ENSPVAG00000003372	EXOSC1	100	96.923	ENSOPRG00000005065	EXOSC1	100	96.923	Ochotona_princeps
ENSPVAG00000003372	EXOSC1	100	98.462	ENSODEG00000016709	EXOSC1	100	98.462	Octodon_degus
ENSPVAG00000003372	EXOSC1	98	80.105	ENSONIG00000017683	exosc1	98	80.105	Oreochromis_niloticus
ENSPVAG00000003372	EXOSC1	59	93.913	ENSOANG00000006563	EXOSC1	98	91.935	Ornithorhynchus_anatinus
ENSPVAG00000003372	EXOSC1	100	92.308	ENSOCUG00000026461	-	100	92.308	Oryctolagus_cuniculus
ENSPVAG00000003372	EXOSC1	100	97.449	ENSOCUG00000011898	-	100	97.449	Oryctolagus_cuniculus
ENSPVAG00000003372	EXOSC1	98	78.646	ENSORLG00000011595	exosc1	98	78.646	Oryzias_latipes
ENSPVAG00000003372	EXOSC1	98	78.646	ENSORLG00020005831	exosc1	98	78.646	Oryzias_latipes_hni
ENSPVAG00000003372	EXOSC1	98	78.646	ENSORLG00015004317	exosc1	98	78.646	Oryzias_latipes_hsok
ENSPVAG00000003372	EXOSC1	98	63.351	ENSOMEG00000013907	exosc1	98	63.351	Oryzias_melastigma
ENSPVAG00000003372	EXOSC1	100	97.949	ENSOGAG00000016259	EXOSC1	100	97.949	Otolemur_garnettii
ENSPVAG00000003372	EXOSC1	100	97.949	ENSOARG00000010136	EXOSC1	100	97.949	Ovis_aries
ENSPVAG00000003372	EXOSC1	100	91.371	ENSPPAG00000039842	EXOSC1	100	91.371	Pan_paniscus
ENSPVAG00000003372	EXOSC1	100	98.974	ENSPPRG00000023366	EXOSC1	100	98.974	Panthera_pardus
ENSPVAG00000003372	EXOSC1	100	98.974	ENSPTIG00000017701	EXOSC1	100	98.974	Panthera_tigris_altaica
ENSPVAG00000003372	EXOSC1	100	97.436	ENSPTRG00000002808	EXOSC1	100	97.436	Pan_troglodytes
ENSPVAG00000003372	EXOSC1	100	97.436	ENSPANG00000021324	EXOSC1	100	97.436	Papio_anubis
ENSPVAG00000003372	EXOSC1	98	81.152	ENSPKIG00000016037	exosc1	98	81.152	Paramormyrops_kingsleyae
ENSPVAG00000003372	EXOSC1	75	82.192	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSPVAG00000003372	EXOSC1	98	68.586	ENSPMGG00000014002	exosc1	98	68.586	Periophthalmus_magnuspinnatus
ENSPVAG00000003372	EXOSC1	100	97.436	ENSPEMG00000010710	-	100	97.436	Peromyscus_maniculatus_bairdii
ENSPVAG00000003372	EXOSC1	95	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSPVAG00000003372	EXOSC1	100	93.333	ENSPCIG00000002210	EXOSC1	99	93.333	Phascolarctos_cinereus
ENSPVAG00000003372	EXOSC1	98	75.916	ENSPFOG00000006755	exosc1	94	75.916	Poecilia_formosa
ENSPVAG00000003372	EXOSC1	98	75.916	ENSPLAG00000005880	exosc1	98	75.916	Poecilia_latipinna
ENSPVAG00000003372	EXOSC1	98	75.916	ENSPMEG00000015598	exosc1	94	75.916	Poecilia_mexicana
ENSPVAG00000003372	EXOSC1	98	66.146	ENSPREG00000000405	exosc1	93	66.146	Poecilia_reticulata
ENSPVAG00000003372	EXOSC1	100	96.923	ENSPPYG00000002531	EXOSC1	100	96.923	Pongo_abelii
ENSPVAG00000003372	EXOSC1	100	97.949	ENSPCAG00000009135	EXOSC1	100	97.949	Procavia_capensis
ENSPVAG00000003372	EXOSC1	100	92.308	ENSPCOG00000027539	EXOSC1	100	92.308	Propithecus_coquereli
ENSPVAG00000003372	EXOSC1	98	80.105	ENSPNYG00000021745	exosc1	98	80.105	Pundamilia_nyererei
ENSPVAG00000003372	EXOSC1	98	80.628	ENSPNAG00000001944	exosc1	98	80.628	Pygocentrus_nattereri
ENSPVAG00000003372	EXOSC1	100	97.436	ENSRNOG00000048708	Exosc1	100	97.436	Rattus_norvegicus
ENSPVAG00000003372	EXOSC1	100	97.436	ENSRBIG00000035618	EXOSC1	100	97.436	Rhinopithecus_bieti
ENSPVAG00000003372	EXOSC1	100	97.436	ENSRROG00000032589	EXOSC1	92	97.436	Rhinopithecus_roxellana
ENSPVAG00000003372	EXOSC1	100	98.974	ENSSBOG00000000359	EXOSC1	100	98.974	Saimiri_boliviensis_boliviensis
ENSPVAG00000003372	EXOSC1	75	96.599	ENSSHAG00000018219	EXOSC1	100	96.599	Sarcophilus_harrisii
ENSPVAG00000003372	EXOSC1	98	82.723	ENSSFOG00015009069	exosc1	98	82.723	Scleropages_formosus
ENSPVAG00000003372	EXOSC1	97	77.895	ENSSFOG00015016289	-	98	77.895	Scleropages_formosus
ENSPVAG00000003372	EXOSC1	98	80.628	ENSSMAG00000003721	exosc1	98	80.628	Scophthalmus_maximus
ENSPVAG00000003372	EXOSC1	98	80.628	ENSSDUG00000002993	exosc1	98	80.628	Seriola_dumerili
ENSPVAG00000003372	EXOSC1	98	80.628	ENSSLDG00000025181	exosc1	98	80.628	Seriola_lalandi_dorsalis
ENSPVAG00000003372	EXOSC1	100	84.103	ENSSARG00000000162	EXOSC1	100	84.103	Sorex_araneus
ENSPVAG00000003372	EXOSC1	99	82.990	ENSSPUG00000012263	EXOSC1	99	82.990	Sphenodon_punctatus
ENSPVAG00000003372	EXOSC1	98	71.728	ENSSPAG00000016792	exosc1	82	71.728	Stegastes_partitus
ENSPVAG00000003372	EXOSC1	100	97.949	ENSSSCG00000010518	EXOSC1	91	97.949	Sus_scrofa
ENSPVAG00000003372	EXOSC1	98	81.250	ENSTGUG00000009692	EXOSC1	99	81.250	Taeniopygia_guttata
ENSPVAG00000003372	EXOSC1	97	74.074	ENSTRUG00000007706	exosc1	98	74.074	Takifugu_rubripes
ENSPVAG00000003372	EXOSC1	97	73.958	ENSTNIG00000014079	exosc1	97	73.958	Tetraodon_nigroviridis
ENSPVAG00000003372	EXOSC1	100	89.744	ENSTBEG00000006011	EXOSC1	100	89.744	Tupaia_belangeri
ENSPVAG00000003372	EXOSC1	94	98.370	ENSTTRG00000009887	EXOSC1	100	98.370	Tursiops_truncatus
ENSPVAG00000003372	EXOSC1	100	82.051	ENSUAMG00000010266	EXOSC1	100	82.051	Ursus_americanus
ENSPVAG00000003372	EXOSC1	100	82.051	ENSUMAG00000022002	EXOSC1	100	82.051	Ursus_maritimus
ENSPVAG00000003372	EXOSC1	100	98.462	ENSVVUG00000023192	EXOSC1	63	98.462	Vulpes_vulpes
ENSPVAG00000003372	EXOSC1	98	78.646	ENSXETG00000003434	exosc1	99	78.646	Xenopus_tropicalis
ENSPVAG00000003372	EXOSC1	62	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSPVAG00000003372	EXOSC1	98	66.667	ENSXMAG00000023382	exosc1	93	66.667	Xiphophorus_maculatus