EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000003805 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 73540 bases
Position: chrGeneScaffold_671:10625-84164
Accession: 11097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000003603	ResIII	PF04851.15	7.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000003807	SMARCA1-201	3150	-	ENSPVAP00000003603	1049 (aa)	-	UPI00018B2B36

Gene Model

Click here to download ENSPVAG00000003805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000003805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000003805	SMARCA1	90	80.147	ENSPVAG00000006482	SMARCA5	85	86.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000003805	SMARCA1	94	97.297	ENSG00000102038	SMARCA1	94	97.194	Homo_sapiens
ENSPVAG00000003805	SMARCA1	84	83.574	ENSAPOG00000016035	smarca5	89	83.484	Acanthochromis_polyacanthus
ENSPVAG00000003805	SMARCA1	94	96.782	ENSAMEG00000015218	SMARCA1	92	96.782	Ailuropoda_melanoleuca
ENSPVAG00000003805	SMARCA1	77	83.837	ENSACIG00000016982	smarca5	90	83.742	Amphilophus_citrinellus
ENSPVAG00000003805	SMARCA1	84	83.574	ENSAOCG00000015578	smarca5	87	83.484	Amphiprion_ocellaris
ENSPVAG00000003805	SMARCA1	84	83.574	ENSAPEG00000011117	smarca5	90	83.484	Amphiprion_percula
ENSPVAG00000003805	SMARCA1	86	83.443	ENSATEG00000012894	smarca5	88	83.355	Anabas_testudineus
ENSPVAG00000003805	SMARCA1	92	85.243	ENSAPLG00000013149	SMARCA1	91	91.355	Anas_platyrhynchos
ENSPVAG00000003805	SMARCA1	91	90.593	ENSACAG00000011376	SMARCA1	87	90.593	Anolis_carolinensis
ENSPVAG00000003805	SMARCA1	94	90.347	ENSANAG00000023098	SMARCA1	92	90.952	Aotus_nancymaae
ENSPVAG00000003805	SMARCA1	88	83.837	ENSACLG00000025356	smarca5	87	83.742	Astatotilapia_calliptera
ENSPVAG00000003805	SMARCA1	86	81.408	ENSAMXG00000011227	smarca1	92	88.031	Astyanax_mexicanus
ENSPVAG00000003805	SMARCA1	90	83.947	ENSAMXG00000005709	smarca5	86	83.721	Astyanax_mexicanus
ENSPVAG00000003805	SMARCA1	94	97.686	ENSBTAG00000002292	SMARCA1	94	97.686	Bos_taurus
ENSPVAG00000003805	SMARCA1	86	66.156	WBGene00002169	isw-1	89	66.156	Caenorhabditis_elegans
ENSPVAG00000003805	SMARCA1	94	97.040	ENSCJAG00000002868	SMARCA1	92	97.040	Callithrix_jacchus
ENSPVAG00000003805	SMARCA1	94	91.905	ENSCAFG00000018673	SMARCA1	90	93.684	Canis_familiaris
ENSPVAG00000003805	SMARCA1	94	96.525	ENSCAFG00020001751	SMARCA1	92	96.525	Canis_lupus_dingo
ENSPVAG00000003805	SMARCA1	94	97.449	ENSCHIG00000009837	SMARCA1	94	97.449	Capra_hircus
ENSPVAG00000003805	SMARCA1	91	97.169	ENSTSYG00000004240	SMARCA1	93	95.536	Carlito_syrichta
ENSPVAG00000003805	SMARCA1	97	88.541	ENSCPOG00000013601	SMARCA1	90	96.684	Cavia_porcellus
ENSPVAG00000003805	SMARCA1	94	93.419	ENSCCAG00000030817	SMARCA1	92	93.419	Cebus_capucinus
ENSPVAG00000003805	SMARCA1	94	97.297	ENSCATG00000015921	SMARCA1	94	95.791	Cercocebus_atys
ENSPVAG00000003805	SMARCA1	92	95.109	ENSCLAG00000002171	SMARCA1	92	96.556	Chinchilla_lanigera
ENSPVAG00000003805	SMARCA1	94	95.882	ENSCSAG00000008460	SMARCA1	92	95.882	Chlorocebus_sabaeus
ENSPVAG00000003805	SMARCA1	88	91.268	ENSCPBG00000001146	SMARCA1	92	91.268	Chrysemys_picta_bellii
ENSPVAG00000003805	SMARCA1	91	69.239	ENSCING00000004110	swi/snf	88	75.553	Ciona_intestinalis
ENSPVAG00000003805	SMARCA1	86	74.742	ENSCSAVG00000004620	-	92	77.500	Ciona_savignyi
ENSPVAG00000003805	SMARCA1	94	97.297	ENSCANG00000007183	SMARCA1	92	97.297	Colobus_angolensis_palliatus
ENSPVAG00000003805	SMARCA1	94	95.281	ENSCGRG00001010776	Smarca1	92	95.281	Cricetulus_griseus_chok1gshd
ENSPVAG00000003805	SMARCA1	90	95.026	ENSCGRG00000015301	Smarca1	93	95.026	Cricetulus_griseus_crigri
ENSPVAG00000003805	SMARCA1	84	83.180	ENSCSEG00000000328	smarca5	87	83.097	Cynoglossus_semilaevis
ENSPVAG00000003805	SMARCA1	84	83.180	ENSCVAG00000008668	smarca5	90	83.097	Cyprinodon_variegatus
ENSPVAG00000003805	SMARCA1	90	84.079	ENSDARG00000052348	smarca5	87	83.850	Danio_rerio
ENSPVAG00000003805	SMARCA1	93	78.706	ENSDARG00000012776	smarca1	90	85.320	Danio_rerio
ENSPVAG00000003805	SMARCA1	92	94.730	ENSDNOG00000004315	SMARCA1	92	94.730	Dasypus_novemcinctus
ENSPVAG00000003805	SMARCA1	94	94.643	ENSDORG00000009270	Smarca1	92	94.643	Dipodomys_ordii
ENSPVAG00000003805	SMARCA1	89	75.785	FBgn0011604	Iswi	88	75.190	Drosophila_melanogaster
ENSPVAG00000003805	SMARCA1	73	96.154	ENSETEG00000017426	SMARCA1	80	96.154	Echinops_telfairi
ENSPVAG00000003805	SMARCA1	90	76.165	ENSEBUG00000001239	smarca5	95	75.642	Eptatretus_burgeri
ENSPVAG00000003805	SMARCA1	88	93.273	ENSEASG00005008218	SMARCA1	91	94.049	Equus_asinus_asinus
ENSPVAG00000003805	SMARCA1	94	96.782	ENSECAG00000012106	SMARCA1	92	96.782	Equus_caballus
ENSPVAG00000003805	SMARCA1	72	96.639	ENSEEUG00000014927	SMARCA1	78	96.639	Erinaceus_europaeus
ENSPVAG00000003805	SMARCA1	93	79.511	ENSELUG00000010515	smarca1	91	86.684	Esox_lucius
ENSPVAG00000003805	SMARCA1	94	98.069	ENSFCAG00000018496	SMARCA1	92	98.069	Felis_catus
ENSPVAG00000003805	SMARCA1	88	84.649	ENSFALG00000000209	SMARCA1	92	91.081	Ficedula_albicollis
ENSPVAG00000003805	SMARCA1	90	96.939	ENSFDAG00000009818	SMARCA1	93	96.939	Fukomys_damarensis
ENSPVAG00000003805	SMARCA1	89	83.443	ENSFHEG00000007687	smarca5	86	83.355	Fundulus_heteroclitus
ENSPVAG00000003805	SMARCA1	97	82.566	ENSGALG00000008431	SMARCA1	91	91.003	Gallus_gallus
ENSPVAG00000003805	SMARCA1	85	83.443	ENSGAFG00000017731	smarca5	87	83.355	Gambusia_affinis
ENSPVAG00000003805	SMARCA1	91	85.417	ENSGAGG00000023575	SMARCA1	91	91.495	Gopherus_agassizii
ENSPVAG00000003805	SMARCA1	71	81.389	ENSGGOG00000012841	-	87	93.421	Gorilla_gorilla
ENSPVAG00000003805	SMARCA1	92	96.173	ENSHGLG00000003080	SMARCA1	92	96.173	Heterocephalus_glaber_female
ENSPVAG00000003805	SMARCA1	88	96.173	ENSHGLG00100001102	SMARCA1	92	96.173	Heterocephalus_glaber_male
ENSPVAG00000003805	SMARCA1	90	77.450	ENSHCOG00000005458	smarca5	87	83.355	Hippocampus_comes
ENSPVAG00000003805	SMARCA1	90	83.421	ENSIPUG00000005229	SMARCA5	89	83.204	Ictalurus_punctatus
ENSPVAG00000003805	SMARCA1	89	86.615	ENSIPUG00000016905	Smarca1	91	86.615	Ictalurus_punctatus
ENSPVAG00000003805	SMARCA1	94	96.301	ENSSTOG00000014524	SMARCA1	94	96.301	Ictidomys_tridecemlineatus
ENSPVAG00000003805	SMARCA1	92	94.466	ENSJJAG00000002593	Smarca1	92	94.388	Jaculus_jaculus
ENSPVAG00000003805	SMARCA1	84	83.443	ENSKMAG00000003777	smarca5	87	83.355	Kryptolebias_marmoratus
ENSPVAG00000003805	SMARCA1	84	83.243	ENSLBEG00000013295	SMARCA1	94	83.201	Labrus_bergylta
ENSPVAG00000003805	SMARCA1	86	83.158	ENSLBEG00000018112	smarca5	87	83.075	Labrus_bergylta
ENSPVAG00000003805	SMARCA1	89	89.691	ENSLACG00000016697	SMARCA1	91	89.345	Latimeria_chalumnae
ENSPVAG00000003805	SMARCA1	89	87.420	ENSLOCG00000014591	smarca1	89	89.535	Lepisosteus_oculatus
ENSPVAG00000003805	SMARCA1	89	94.020	ENSLAFG00000000896	SMARCA1	94	94.020	Loxodonta_africana
ENSPVAG00000003805	SMARCA1	94	97.297	ENSMFAG00000002117	SMARCA1	94	95.791	Macaca_fascicularis
ENSPVAG00000003805	SMARCA1	94	97.297	ENSMMUG00000008818	SMARCA1	94	95.791	Macaca_mulatta
ENSPVAG00000003805	SMARCA1	94	97.297	ENSMNEG00000041768	SMARCA1	94	95.791	Macaca_nemestrina
ENSPVAG00000003805	SMARCA1	94	97.297	ENSMLEG00000043198	SMARCA1	92	97.297	Mandrillus_leucophaeus
ENSPVAG00000003805	SMARCA1	84	83.837	ENSMAMG00000014294	smarca5	87	83.742	Mastacembelus_armatus
ENSPVAG00000003805	SMARCA1	88	83.837	ENSMZEG00005009369	smarca5	87	83.742	Maylandia_zebra
ENSPVAG00000003805	SMARCA1	93	84.821	ENSMGAG00000007042	SMARCA1	92	91.355	Meleagris_gallopavo
ENSPVAG00000003805	SMARCA1	94	95.918	ENSMAUG00000008133	Smarca1	92	95.918	Mesocricetus_auratus
ENSPVAG00000003805	SMARCA1	94	97.683	ENSMICG00000015768	SMARCA1	92	97.683	Microcebus_murinus
ENSPVAG00000003805	SMARCA1	94	95.791	ENSMOCG00000009464	Smarca1	92	95.791	Microtus_ochrogaster
ENSPVAG00000003805	SMARCA1	86	81.340	ENSMMOG00000005547	smarca5	91	81.290	Mola_mola
ENSPVAG00000003805	SMARCA1	97	82.583	ENSMODG00000013187	-	91	91.271	Monodelphis_domestica
ENSPVAG00000003805	SMARCA1	84	83.180	ENSMALG00000002081	smarca5	92	81.911	Monopterus_albus
ENSPVAG00000003805	SMARCA1	94	94.208	MGP_CAROLIEiJ_G0033034	Smarca1	92	94.133	Mus_caroli
ENSPVAG00000003805	SMARCA1	94	94.208	ENSMUSG00000031099	Smarca1	92	94.133	Mus_musculus
ENSPVAG00000003805	SMARCA1	94	94.208	MGP_PahariEiJ_G0031579	Smarca1	92	94.133	Mus_pahari
ENSPVAG00000003805	SMARCA1	94	94.208	MGP_SPRETEiJ_G0034192	Smarca1	92	94.133	Mus_spretus
ENSPVAG00000003805	SMARCA1	94	98.069	ENSMPUG00000017423	SMARCA1	87	98.069	Mustela_putorius_furo
ENSPVAG00000003805	SMARCA1	94	94.480	ENSMLUG00000029614	SMARCA1	92	94.480	Myotis_lucifugus
ENSPVAG00000003805	SMARCA1	93	96.556	ENSNGAG00000006492	Smarca1	92	96.556	Nannospalax_galili
ENSPVAG00000003805	SMARCA1	84	83.968	ENSNBRG00000004463	smarca5	91	83.871	Neolamprologus_brichardi
ENSPVAG00000003805	SMARCA1	94	96.396	ENSNLEG00000015179	SMARCA1	92	96.396	Nomascus_leucogenys
ENSPVAG00000003805	SMARCA1	90	75.210	ENSMEUG00000008819	SMARCA1	94	80.921	Notamacropus_eugenii
ENSPVAG00000003805	SMARCA1	92	96.429	ENSODEG00000012163	SMARCA1	92	96.429	Octodon_degus
ENSPVAG00000003805	SMARCA1	88	83.968	ENSONIG00000009993	smarca5	87	83.871	Oreochromis_niloticus
ENSPVAG00000003805	SMARCA1	91	85.848	ENSOANG00000002862	SMARCA1	91	91.892	Ornithorhynchus_anatinus
ENSPVAG00000003805	SMARCA1	92	94.981	ENSOCUG00000001047	SMARCA1	90	94.981	Oryctolagus_cuniculus
ENSPVAG00000003805	SMARCA1	84	83.443	ENSORLG00000021998	smarca5	87	83.355	Oryzias_latipes
ENSPVAG00000003805	SMARCA1	84	83.574	ENSORLG00020017679	smarca5	88	83.484	Oryzias_latipes_hni
ENSPVAG00000003805	SMARCA1	84	83.443	ENSORLG00015017210	smarca5	87	83.355	Oryzias_latipes_hsok
ENSPVAG00000003805	SMARCA1	84	83.443	ENSOMEG00000000086	smarca5	87	83.355	Oryzias_melastigma
ENSPVAG00000003805	SMARCA1	94	97.449	ENSOGAG00000004399	SMARCA1	94	97.449	Otolemur_garnettii
ENSPVAG00000003805	SMARCA1	88	96.053	ENSOARG00000014638	SMARCA1	92	96.970	Ovis_aries
ENSPVAG00000003805	SMARCA1	94	97.297	ENSPPAG00000034647	SMARCA1	92	97.297	Pan_paniscus
ENSPVAG00000003805	SMARCA1	94	98.198	ENSPPRG00000008929	SMARCA1	92	98.198	Panthera_pardus
ENSPVAG00000003805	SMARCA1	88	95.658	ENSPTIG00000000915	SMARCA1	90	95.658	Panthera_tigris_altaica
ENSPVAG00000003805	SMARCA1	94	97.297	ENSPTRG00000049876	SMARCA1	94	95.791	Pan_troglodytes
ENSPVAG00000003805	SMARCA1	94	97.297	ENSPANG00000003871	SMARCA1	92	97.297	Papio_anubis
ENSPVAG00000003805	SMARCA1	91	79.249	ENSPKIG00000013411	smarca1	91	86.358	Paramormyrops_kingsleyae
ENSPVAG00000003805	SMARCA1	94	85.137	ENSPSIG00000010101	SMARCA1	92	91.753	Pelodiscus_sinensis
ENSPVAG00000003805	SMARCA1	94	96.173	ENSPEMG00000017503	Smarca1	92	96.173	Peromyscus_maniculatus_bairdii
ENSPVAG00000003805	SMARCA1	97	83.170	ENSPCIG00000015460	SMARCA1	92	91.784	Phascolarctos_cinereus
ENSPVAG00000003805	SMARCA1	84	83.443	ENSPFOG00000007649	smarca5	87	83.355	Poecilia_formosa
ENSPVAG00000003805	SMARCA1	84	83.443	ENSPLAG00000003363	smarca5	87	83.355	Poecilia_latipinna
ENSPVAG00000003805	SMARCA1	84	83.443	ENSPMEG00000019849	smarca5	87	83.355	Poecilia_mexicana
ENSPVAG00000003805	SMARCA1	84	83.443	ENSPREG00000023250	smarca5	87	83.355	Poecilia_reticulata
ENSPVAG00000003805	SMARCA1	94	92.278	ENSPPYG00000020703	SMARCA1	92	92.278	Pongo_abelii
ENSPVAG00000003805	SMARCA1	73	94.309	ENSPCOG00000020722	SMARCA1	86	94.309	Propithecus_coquereli
ENSPVAG00000003805	SMARCA1	94	94.337	ENSRNOG00000003762	Smarca1	90	94.337	Rattus_norvegicus
ENSPVAG00000003805	SMARCA1	94	97.297	ENSRROG00000034167	SMARCA1	92	97.297	Rhinopithecus_roxellana
ENSPVAG00000003805	SMARCA1	90	97.169	ENSSBOG00000020641	SMARCA1	92	95.882	Saimiri_boliviensis_boliviensis
ENSPVAG00000003805	SMARCA1	90	80.382	ENSSHAG00000013518	SMARCA1	97	79.876	Sarcophilus_harrisii
ENSPVAG00000003805	SMARCA1	94	75.279	ENSSFOG00015016794	smarca5	91	83.850	Scleropages_formosus
ENSPVAG00000003805	SMARCA1	96	79.365	ENSSFOG00015009043	smarca1	92	88.546	Scleropages_formosus
ENSPVAG00000003805	SMARCA1	85	82.763	ENSSMAG00000004801	smarca5	87	82.687	Scophthalmus_maximus
ENSPVAG00000003805	SMARCA1	84	83.049	ENSSDUG00000020690	smarca5	88	82.968	Seriola_dumerili
ENSPVAG00000003805	SMARCA1	84	83.049	ENSSLDG00000025190	smarca5	88	82.968	Seriola_lalandi_dorsalis
ENSPVAG00000003805	SMARCA1	82	94.194	ENSSARG00000000842	SMARCA1	86	94.194	Sorex_araneus
ENSPVAG00000003805	SMARCA1	95	83.952	ENSSPUG00000000590	SMARCA1	90	90.434	Sphenodon_punctatus
ENSPVAG00000003805	SMARCA1	85	83.706	ENSSPAG00000002894	smarca5	88	83.613	Stegastes_partitus
ENSPVAG00000003805	SMARCA1	94	96.144	ENSSSCG00000012649	SMARCA1	94	96.144	Sus_scrofa
ENSPVAG00000003805	SMARCA1	91	85.220	ENSTGUG00000003899	-	91	91.226	Taeniopygia_guttata
ENSPVAG00000003805	SMARCA1	85	83.311	ENSTRUG00000014094	smarca5	87	83.226	Takifugu_rubripes
ENSPVAG00000003805	SMARCA1	84	83.706	ENSTNIG00000017717	smarca5	87	83.613	Tetraodon_nigroviridis
ENSPVAG00000003805	SMARCA1	89	96.939	ENSTBEG00000014973	SMARCA1	94	96.939	Tupaia_belangeri
ENSPVAG00000003805	SMARCA1	88	95.890	ENSTTRG00000006168	SMARCA1	94	95.890	Tursiops_truncatus
ENSPVAG00000003805	SMARCA1	94	96.396	ENSUAMG00000020201	SMARCA1	92	96.396	Ursus_americanus
ENSPVAG00000003805	SMARCA1	88	93.421	ENSUMAG00000004073	SMARCA1	91	93.421	Ursus_maritimus
ENSPVAG00000003805	SMARCA1	79	97.143	ENSVPAG00000010492	-	86	97.143	Vicugna_pacos
ENSPVAG00000003805	SMARCA1	88	96.396	ENSVVUG00000008878	SMARCA1	94	96.272	Vulpes_vulpes
ENSPVAG00000003805	SMARCA1	92	82.766	ENSXETG00000001526	smarca1	92	89.161	Xenopus_tropicalis
ENSPVAG00000003805	SMARCA1	85	83.311	ENSXCOG00000011170	smarca5	90	83.226	Xiphophorus_couchianus
ENSPVAG00000003805	SMARCA1	85	83.311	ENSXMAG00000009678	smarca5	92	82.737	Xiphophorus_maculatus