EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000003812 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 9559 bases
Position: chrscaffold_425:160574-170132
Accession: 105293876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000003607	RRM_1	PF00076.22	1.1e-38	1	3
ENSPVAP00000003607	RRM_1	PF00076.22	1.1e-38	2	3
ENSPVAP00000003607	RRM_1	PF00076.22	1.1e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000003811	RBM47-201	1785	-	ENSPVAP00000003607	594 (aa)	XP_011361066	UPI00018B3D5D

Gene Model

Click here to download ENSPVAG00000003812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000003812's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000003812	RBM47	52	54.839	ENSPVAG00000011888	SYNCRIP	69	46.897
ENSPVAG00000003812	RBM47	52	55.591	ENSPVAG00000014804	HNRNPR	71	45.395
ENSPVAG00000003812	RBM47	51	73.667	ENSPVAG00000008376	RBM46	56	73.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000003812	RBM47	100	95.638	ENSG00000163694	RBM47	100	97.696	Homo_sapiens
ENSPVAG00000003812	RBM47	100	76.962	ENSAPOG00000011062	rbm47	93	83.473	Acanthochromis_polyacanthus
ENSPVAG00000003812	RBM47	100	93.645	ENSAMEG00000009672	RBM47	100	93.478	Ailuropoda_melanoleuca
ENSPVAG00000003812	RBM47	100	76.628	ENSACIG00000011531	rbm47	100	75.292	Amphilophus_citrinellus
ENSPVAG00000003812	RBM47	100	77.258	ENSAOCG00000022245	rbm47	93	83.473	Amphiprion_ocellaris
ENSPVAG00000003812	RBM47	100	77.090	ENSAPEG00000018304	rbm47	93	83.473	Amphiprion_percula
ENSPVAG00000003812	RBM47	100	76.672	ENSATEG00000018400	rbm47	94	77.029	Anabas_testudineus
ENSPVAG00000003812	RBM47	100	88.235	ENSAPLG00000013974	RBM47	100	87.395	Anas_platyrhynchos
ENSPVAG00000003812	RBM47	100	85.691	ENSACAG00000011833	RBM47	100	85.691	Anolis_carolinensis
ENSPVAG00000003812	RBM47	100	94.966	ENSANAG00000029440	RBM47	100	94.128	Aotus_nancymaae
ENSPVAG00000003812	RBM47	100	76.307	ENSACLG00000016902	rbm47	94	84.874	Astatotilapia_calliptera
ENSPVAG00000003812	RBM47	100	74.673	ENSAMXG00000021794	rbm47	95	77.414	Astyanax_mexicanus
ENSPVAG00000003812	RBM47	100	96.465	ENSBTAG00000002356	RBM47	100	96.465	Bos_taurus
ENSPVAG00000003812	RBM47	100	94.640	ENSCJAG00000019385	RBM47	100	93.802	Callithrix_jacchus
ENSPVAG00000003812	RBM47	96	93.531	ENSCAFG00000015898	RBM47	100	92.114	Canis_familiaris
ENSPVAG00000003812	RBM47	83	94.929	ENSCAFG00020010558	RBM47	94	92.754	Canis_lupus_dingo
ENSPVAG00000003812	RBM47	100	96.801	ENSCHIG00000026214	RBM47	100	96.801	Capra_hircus
ENSPVAG00000003812	RBM47	86	79.256	ENSTSYG00000033612	RBM47	89	91.928	Carlito_syrichta
ENSPVAG00000003812	RBM47	100	87.227	ENSCAPG00000008426	RBM47	100	86.387	Cavia_aperea
ENSPVAG00000003812	RBM47	100	93.445	ENSCPOG00000014100	RBM47	100	92.605	Cavia_porcellus
ENSPVAG00000003812	RBM47	99	65.940	ENSCCAG00000024397	-	99	65.159	Cebus_capucinus
ENSPVAG00000003812	RBM47	100	94.807	ENSCCAG00000030129	-	100	93.970	Cebus_capucinus
ENSPVAG00000003812	RBM47	100	95.805	ENSCATG00000042064	RBM47	100	95.805	Cercocebus_atys
ENSPVAG00000003812	RBM47	100	93.277	ENSCLAG00000001684	RBM47	100	93.671	Chinchilla_lanigera
ENSPVAG00000003812	RBM47	100	95.805	ENSCSAG00000017060	RBM47	100	95.805	Chlorocebus_sabaeus
ENSPVAG00000003812	RBM47	88	91.139	ENSCHOG00000011731	RBM47	88	91.139	Choloepus_hoffmanni
ENSPVAG00000003812	RBM47	100	90.150	ENSCPBG00000013831	RBM47	100	89.482	Chrysemys_picta_bellii
ENSPVAG00000003812	RBM47	100	95.638	ENSCANG00000019997	RBM47	100	95.638	Colobus_angolensis_palliatus
ENSPVAG00000003812	RBM47	100	92.127	ENSCGRG00001000623	-	100	91.457	Cricetulus_griseus_chok1gshd
ENSPVAG00000003812	RBM47	100	63.756	ENSCGRG00001020102	-	100	70.875	Cricetulus_griseus_chok1gshd
ENSPVAG00000003812	RBM47	100	91.290	ENSCGRG00000007762	-	100	93.038	Cricetulus_griseus_crigri
ENSPVAG00000003812	RBM47	100	63.427	ENSCGRG00000014760	-	100	70.539	Cricetulus_griseus_crigri
ENSPVAG00000003812	RBM47	100	74.624	ENSCSEG00000004545	rbm47	100	73.544	Cynoglossus_semilaevis
ENSPVAG00000003812	RBM47	100	75.753	ENSCVAG00000020144	rbm47	93	83.242	Cyprinodon_variegatus
ENSPVAG00000003812	RBM47	100	76.721	ENSDARG00000061985	rbm47	95	79.029	Danio_rerio
ENSPVAG00000003812	RBM47	100	93.266	ENSDNOG00000046854	RBM47	100	93.434	Dasypus_novemcinctus
ENSPVAG00000003812	RBM47	100	94.472	ENSDORG00000010144	Rbm47	100	94.305	Dipodomys_ordii
ENSPVAG00000003812	RBM47	100	93.456	ENSETEG00000009194	RBM47	100	92.617	Echinops_telfairi
ENSPVAG00000003812	RBM47	99	56.837	ENSEBUG00000011912	rbm47	95	58.651	Eptatretus_burgeri
ENSPVAG00000003812	RBM47	100	97.138	ENSEASG00005008443	RBM47	100	97.138	Equus_asinus_asinus
ENSPVAG00000003812	RBM47	100	97.138	ENSECAG00000004400	RBM47	100	97.138	Equus_caballus
ENSPVAG00000003812	RBM47	75	95.671	ENSEEUG00000001194	RBM47	75	95.671	Erinaceus_europaeus
ENSPVAG00000003812	RBM47	99	75.626	ENSELUG00000006148	rbm47	93	86.072	Esox_lucius
ENSPVAG00000003812	RBM47	100	96.801	ENSFCAG00000012399	RBM47	100	96.801	Felis_catus
ENSPVAG00000003812	RBM47	100	90.436	ENSFALG00000002861	RBM47	100	89.933	Ficedula_albicollis
ENSPVAG00000003812	RBM47	100	92.101	ENSFDAG00000016326	RBM47	100	90.588	Fukomys_damarensis
ENSPVAG00000003812	RBM47	100	76.628	ENSFHEG00000007938	rbm47	100	74.124	Fundulus_heteroclitus
ENSPVAG00000003812	RBM47	100	74.675	ENSGMOG00000014802	rbm47	94	76.776	Gadus_morhua
ENSPVAG00000003812	RBM47	63	91.512	ENSGALG00000014267	RBM47	99	90.451	Gallus_gallus
ENSPVAG00000003812	RBM47	63	82.493	ENSGAFG00000020571	rbm47	98	80.902	Gambusia_affinis
ENSPVAG00000003812	RBM47	100	72.683	ENSGACG00000016223	rbm47	93	82.073	Gasterosteus_aculeatus
ENSPVAG00000003812	RBM47	100	90.317	ENSGAGG00000020051	RBM47	100	89.649	Gopherus_agassizii
ENSPVAG00000003812	RBM47	100	95.805	ENSGGOG00000001367	RBM47	100	95.805	Gorilla_gorilla
ENSPVAG00000003812	RBM47	100	76.221	ENSHBUG00000003520	rbm47	94	84.874	Haplochromis_burtoni
ENSPVAG00000003812	RBM47	85	85.600	ENSHGLG00000016914	RBM47	100	94.937	Heterocephalus_glaber_female
ENSPVAG00000003812	RBM47	100	83.333	ENSHGLG00100003071	-	100	81.987	Heterocephalus_glaber_male
ENSPVAG00000003812	RBM47	100	92.424	ENSHGLG00100014028	-	100	94.937	Heterocephalus_glaber_male
ENSPVAG00000003812	RBM47	99	75.793	ENSHCOG00000002074	rbm47	93	83.754	Hippocampus_comes
ENSPVAG00000003812	RBM47	100	77.258	ENSIPUG00000004743	rbm47	100	76.923	Ictalurus_punctatus
ENSPVAG00000003812	RBM47	100	93.802	ENSSTOG00000004727	RBM47	100	94.304	Ictidomys_tridecemlineatus
ENSPVAG00000003812	RBM47	100	93.645	ENSJJAG00000013823	Rbm47	100	93.478	Jaculus_jaculus
ENSPVAG00000003812	RBM47	100	77.667	ENSKMAG00000000084	rbm47	93	84.314	Kryptolebias_marmoratus
ENSPVAG00000003812	RBM47	100	75.626	ENSLBEG00000008436	rbm47	93	81.513	Labrus_bergylta
ENSPVAG00000003812	RBM47	100	85.117	ENSLACG00000007196	RBM47	100	84.448	Latimeria_chalumnae
ENSPVAG00000003812	RBM47	100	81.940	ENSLOCG00000012966	rbm47	95	81.271	Lepisosteus_oculatus
ENSPVAG00000003812	RBM47	100	93.792	ENSLAFG00000011998	RBM47	100	92.450	Loxodonta_africana
ENSPVAG00000003812	RBM47	100	95.805	ENSMFAG00000037967	RBM47	100	95.805	Macaca_fascicularis
ENSPVAG00000003812	RBM47	100	95.805	ENSMMUG00000012036	RBM47	100	97.409	Macaca_mulatta
ENSPVAG00000003812	RBM47	100	95.638	ENSMNEG00000040774	RBM47	100	95.638	Macaca_nemestrina
ENSPVAG00000003812	RBM47	100	97.778	ENSMLEG00000041432	RBM47	100	97.778	Mandrillus_leucophaeus
ENSPVAG00000003812	RBM47	100	75.817	ENSMAMG00000019143	rbm47	94	80.637	Mastacembelus_armatus
ENSPVAG00000003812	RBM47	100	76.307	ENSMZEG00005023659	rbm47	95	77.759	Maylandia_zebra
ENSPVAG00000003812	RBM47	100	89.983	ENSMGAG00000012226	RBM47	100	88.982	Meleagris_gallopavo
ENSPVAG00000003812	RBM47	100	92.437	ENSMAUG00000006493	Rbm47	100	93.277	Mesocricetus_auratus
ENSPVAG00000003812	RBM47	100	89.226	ENSMICG00000026417	RBM47	100	89.865	Microcebus_murinus
ENSPVAG00000003812	RBM47	100	93.277	ENSMOCG00000021170	Rbm47	100	94.937	Microtus_ochrogaster
ENSPVAG00000003812	RBM47	100	76.346	ENSMMOG00000007260	rbm47	95	77.069	Mola_mola
ENSPVAG00000003812	RBM47	52	81.410	ENSMODG00000015426	-	97	81.672	Monodelphis_domestica
ENSPVAG00000003812	RBM47	100	91.246	ENSMODG00000007003	RBM47	100	90.404	Monodelphis_domestica
ENSPVAG00000003812	RBM47	100	81.650	ENSMODG00000020561	-	100	81.650	Monodelphis_domestica
ENSPVAG00000003812	RBM47	100	76.127	ENSMALG00000005167	rbm47	94	83.754	Monopterus_albus
ENSPVAG00000003812	RBM47	100	92.929	MGP_CAROLIEiJ_G0027258	Rbm47	100	92.593	Mus_caroli
ENSPVAG00000003812	RBM47	100	93.266	ENSMUSG00000070780	Rbm47	100	92.929	Mus_musculus
ENSPVAG00000003812	RBM47	100	93.266	MGP_PahariEiJ_G0017040	Rbm47	100	93.038	Mus_pahari
ENSPVAG00000003812	RBM47	100	92.761	MGP_SPRETEiJ_G0028253	Rbm47	100	92.424	Mus_spretus
ENSPVAG00000003812	RBM47	100	96.134	ENSMPUG00000006177	RBM47	94	96.134	Mustela_putorius_furo
ENSPVAG00000003812	RBM47	100	93.939	ENSMLUG00000000889	RBM47	100	94.108	Myotis_lucifugus
ENSPVAG00000003812	RBM47	100	93.289	ENSNGAG00000003325	Rbm47	100	92.953	Nannospalax_galili
ENSPVAG00000003812	RBM47	100	76.346	ENSNBRG00000015092	rbm47	95	77.625	Neolamprologus_brichardi
ENSPVAG00000003812	RBM47	100	95.470	ENSNLEG00000017151	RBM47	100	95.470	Nomascus_leucogenys
ENSPVAG00000003812	RBM47	72	86.014	ENSMEUG00000009516	-	99	84.742	Notamacropus_eugenii
ENSPVAG00000003812	RBM47	75	95.062	ENSOPRG00000016507	-	75	95.062	Ochotona_princeps
ENSPVAG00000003812	RBM47	100	93.109	ENSODEG00000004873	RBM47	100	92.773	Octodon_degus
ENSPVAG00000003812	RBM47	100	75.407	ENSONIG00000009061	rbm47	94	76.379	Oreochromis_niloticus
ENSPVAG00000003812	RBM47	100	86.190	ENSOANG00000008978	RBM47	100	86.023	Ornithorhynchus_anatinus
ENSPVAG00000003812	RBM47	100	95.462	ENSOCUG00000012034	RBM47	100	95.462	Oryctolagus_cuniculus
ENSPVAG00000003812	RBM47	100	76.628	ENSORLG00000005847	rbm47	94	83.754	Oryzias_latipes
ENSPVAG00000003812	RBM47	100	76.795	ENSORLG00020005154	rbm47	94	83.754	Oryzias_latipes_hni
ENSPVAG00000003812	RBM47	100	77.129	ENSORLG00015000066	rbm47	94	84.034	Oryzias_latipes_hsok
ENSPVAG00000003812	RBM47	100	78.130	ENSOMEG00000010730	rbm47	100	75.459	Oryzias_melastigma
ENSPVAG00000003812	RBM47	100	86.195	ENSOGAG00000025193	-	100	85.522	Otolemur_garnettii
ENSPVAG00000003812	RBM47	100	96.134	ENSOGAG00000029367	-	100	96.134	Otolemur_garnettii
ENSPVAG00000003812	RBM47	100	86.869	ENSOARG00000012711	RBM47	100	86.288	Ovis_aries
ENSPVAG00000003812	RBM47	100	95.638	ENSPPAG00000029763	RBM47	100	95.638	Pan_paniscus
ENSPVAG00000003812	RBM47	100	93.434	ENSPPRG00000012873	RBM47	100	93.434	Panthera_pardus
ENSPVAG00000003812	RBM47	85	92.673	ENSPTIG00000017046	RBM47	100	92.673	Panthera_tigris_altaica
ENSPVAG00000003812	RBM47	100	95.805	ENSPTRG00000016006	RBM47	100	95.805	Pan_troglodytes
ENSPVAG00000003812	RBM47	100	95.805	ENSPANG00000005980	RBM47	100	95.805	Papio_anubis
ENSPVAG00000003812	RBM47	96	75.475	ENSPKIG00000013431	RBM47	92	85.955	Paramormyrops_kingsleyae
ENSPVAG00000003812	RBM47	96	77.604	ENSPKIG00000005037	rbm47	100	74.050	Paramormyrops_kingsleyae
ENSPVAG00000003812	RBM47	89	90.960	ENSPSIG00000017516	RBM47	97	90.019	Pelodiscus_sinensis
ENSPVAG00000003812	RBM47	100	74.624	ENSPMGG00000018540	rbm47	100	73.957	Periophthalmus_magnuspinnatus
ENSPVAG00000003812	RBM47	100	93.456	ENSPEMG00000011088	Rbm47	100	93.289	Peromyscus_maniculatus_bairdii
ENSPVAG00000003812	RBM47	100	76.136	ENSPFOG00000007997	rbm47	94	77.202	Poecilia_formosa
ENSPVAG00000003812	RBM47	100	76.098	ENSPLAG00000002072	rbm47	100	80.106	Poecilia_latipinna
ENSPVAG00000003812	RBM47	100	78.167	ENSPMEG00000017492	rbm47	93	83.708	Poecilia_mexicana
ENSPVAG00000003812	RBM47	100	76.585	ENSPREG00000008456	rbm47	100	80.371	Poecilia_reticulata
ENSPVAG00000003812	RBM47	98	81.450	ENSPPYG00000014688	RBM47	98	80.993	Pongo_abelii
ENSPVAG00000003812	RBM47	81	96.020	ENSPCAG00000011879	RBM47	81	96.020	Procavia_capensis
ENSPVAG00000003812	RBM47	100	91.414	ENSPCOG00000023451	RBM47	100	91.246	Propithecus_coquereli
ENSPVAG00000003812	RBM47	100	75.935	ENSPNYG00000022868	rbm47	95	77.530	Pundamilia_nyererei
ENSPVAG00000003812	RBM47	100	75.654	ENSPNAG00000007940	rbm47	95	78.621	Pygocentrus_nattereri
ENSPVAG00000003812	RBM47	100	93.098	ENSRNOG00000002408	Rbm47	100	92.761	Rattus_norvegicus
ENSPVAG00000003812	RBM47	100	95.638	ENSRBIG00000039601	RBM47	100	95.638	Rhinopithecus_bieti
ENSPVAG00000003812	RBM47	100	95.638	ENSRROG00000044696	RBM47	100	95.638	Rhinopithecus_roxellana
ENSPVAG00000003812	RBM47	100	91.077	ENSSBOG00000028475	RBM47	100	95.267	Saimiri_boliviensis_boliviensis
ENSPVAG00000003812	RBM47	100	90.909	ENSSHAG00000017576	RBM47	100	90.067	Sarcophilus_harrisii
ENSPVAG00000003812	RBM47	100	74.333	ENSSFOG00015024101	RBM47	100	74.000	Scleropages_formosus
ENSPVAG00000003812	RBM47	100	73.806	ENSSFOG00015012445	rbm47	100	73.267	Scleropages_formosus
ENSPVAG00000003812	RBM47	100	74.267	ENSSMAG00000009744	rbm47	94	82.073	Scophthalmus_maximus
ENSPVAG00000003812	RBM47	100	77.462	ENSSDUG00000022684	rbm47	100	75.626	Seriola_dumerili
ENSPVAG00000003812	RBM47	100	77.963	ENSSLDG00000003109	rbm47	92	83.989	Seriola_lalandi_dorsalis
ENSPVAG00000003812	RBM47	85	94.643	ENSSARG00000001735	RBM47	84	94.643	Sorex_araneus
ENSPVAG00000003812	RBM47	100	87.458	ENSSPUG00000007515	RBM47	100	88.329	Sphenodon_punctatus
ENSPVAG00000003812	RBM47	100	78.130	ENSSPAG00000001257	rbm47	93	84.594	Stegastes_partitus
ENSPVAG00000003812	RBM47	100	96.465	ENSSSCG00000008796	RBM47	100	96.465	Sus_scrofa
ENSPVAG00000003812	RBM47	100	89.765	ENSTGUG00000008705	RBM47	100	89.262	Taeniopygia_guttata
ENSPVAG00000003812	RBM47	100	75.459	ENSTRUG00000014050	rbm47	100	73.456	Takifugu_rubripes
ENSPVAG00000003812	RBM47	100	75.327	ENSTNIG00000006127	rbm47	95	76.684	Tetraodon_nigroviridis
ENSPVAG00000003812	RBM47	77	89.390	ENSTBEG00000001607	RBM47	76	88.608	Tupaia_belangeri
ENSPVAG00000003812	RBM47	100	95.623	ENSTTRG00000002839	RBM47	100	95.623	Tursiops_truncatus
ENSPVAG00000003812	RBM47	100	95.966	ENSUAMG00000021346	RBM47	100	95.966	Ursus_americanus
ENSPVAG00000003812	RBM47	57	97.945	ENSVPAG00000000641	-	57	97.945	Vicugna_pacos
ENSPVAG00000003812	RBM47	96	94.231	ENSVVUG00000014774	RBM47	100	92.450	Vulpes_vulpes
ENSPVAG00000003812	RBM47	100	86.050	ENSXETG00000012802	rbm47	100	86.050	Xenopus_tropicalis
ENSPVAG00000003812	RBM47	88	82.228	ENSXCOG00000000780	rbm47	100	80.106	Xiphophorus_couchianus
ENSPVAG00000003812	RBM47	100	76.795	ENSXMAG00000009874	rbm47	93	83.427	Xiphophorus_maculatus