EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000003847 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 24635 bases
Position: chrGeneScaffold_3350:98029-122663
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000003641	CPSF_A	PF03178.15	2.7e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000003848	DDB1-201	3423	-	ENSPVAP00000003641	1140 (aa)	-	UPI00018B28F2

Gene Model

Click here to download ENSPVAG00000003847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000003847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000003847	DDB1	100	99.737	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSPVAG00000003847	DDB1	98	91.285	ENSAPOG00000005036	ddb1	99	91.327	Acanthochromis_polyacanthus
ENSPVAG00000003847	DDB1	100	99.825	ENSAMEG00000016518	DDB1	100	99.825	Ailuropoda_melanoleuca
ENSPVAG00000003847	DDB1	86	91.633	ENSACIG00000020624	ddb1	99	91.633	Amphilophus_citrinellus
ENSPVAG00000003847	DDB1	100	90.965	ENSAOCG00000003066	ddb1	100	90.965	Amphiprion_ocellaris
ENSPVAG00000003847	DDB1	100	91.053	ENSAPEG00000000092	ddb1	100	91.053	Amphiprion_percula
ENSPVAG00000003847	DDB1	94	91.535	ENSATEG00000020571	ddb1	97	91.535	Anabas_testudineus
ENSPVAG00000003847	DDB1	98	96.356	ENSAPLG00000007174	DDB1	99	96.356	Anas_platyrhynchos
ENSPVAG00000003847	DDB1	100	96.842	ENSACAG00000017758	DDB1	100	96.842	Anolis_carolinensis
ENSPVAG00000003847	DDB1	100	99.737	ENSANAG00000021878	DDB1	100	99.737	Aotus_nancymaae
ENSPVAG00000003847	DDB1	100	91.316	ENSACLG00000012401	ddb1	100	91.316	Astatotilapia_calliptera
ENSPVAG00000003847	DDB1	100	99.649	ENSBTAG00000021569	DDB1	93	99.649	Bos_taurus
ENSPVAG00000003847	DDB1	100	37.211	WBGene00010890	ddb-1	100	37.126	Caenorhabditis_elegans
ENSPVAG00000003847	DDB1	100	99.737	ENSCJAG00000019319	DDB1	100	99.737	Callithrix_jacchus
ENSPVAG00000003847	DDB1	100	99.825	ENSCAFG00000016264	DDB1	100	99.825	Canis_familiaris
ENSPVAG00000003847	DDB1	94	99.535	ENSCAFG00020012722	DDB1	99	99.535	Canis_lupus_dingo
ENSPVAG00000003847	DDB1	100	99.649	ENSCHIG00000014969	DDB1	100	99.649	Capra_hircus
ENSPVAG00000003847	DDB1	100	99.035	ENSTSYG00000008027	DDB1	100	99.035	Carlito_syrichta
ENSPVAG00000003847	DDB1	98	99.017	ENSCAPG00000010786	DDB1	100	99.017	Cavia_aperea
ENSPVAG00000003847	DDB1	100	99.035	ENSCPOG00000009956	DDB1	100	99.035	Cavia_porcellus
ENSPVAG00000003847	DDB1	100	99.737	ENSCCAG00000035883	DDB1	100	99.737	Cebus_capucinus
ENSPVAG00000003847	DDB1	100	97.222	ENSCATG00000044495	DDB1	100	97.222	Cercocebus_atys
ENSPVAG00000003847	DDB1	100	99.123	ENSCLAG00000004126	DDB1	100	99.123	Chinchilla_lanigera
ENSPVAG00000003847	DDB1	100	99.737	ENSCSAG00000006392	DDB1	100	99.737	Chlorocebus_sabaeus
ENSPVAG00000003847	DDB1	88	92.803	ENSCHOG00000011377	DDB1	90	92.803	Choloepus_hoffmanni
ENSPVAG00000003847	DDB1	100	97.544	ENSCPBG00000017728	DDB1	100	97.544	Chrysemys_picta_bellii
ENSPVAG00000003847	DDB1	100	61.806	ENSCING00000007437	-	100	61.719	Ciona_intestinalis
ENSPVAG00000003847	DDB1	94	60.092	ENSCSAVG00000004783	-	100	60.092	Ciona_savignyi
ENSPVAG00000003847	DDB1	100	99.737	ENSCANG00000019948	DDB1	100	99.737	Colobus_angolensis_palliatus
ENSPVAG00000003847	DDB1	100	99.737	ENSCGRG00001016599	Ddb1	100	99.737	Cricetulus_griseus_chok1gshd
ENSPVAG00000003847	DDB1	100	99.737	ENSCGRG00000013427	Ddb1	100	99.737	Cricetulus_griseus_crigri
ENSPVAG00000003847	DDB1	93	91.046	ENSCSEG00000012499	ddb1	99	89.474	Cynoglossus_semilaevis
ENSPVAG00000003847	DDB1	94	91.240	ENSCVAG00000019531	ddb1	99	91.240	Cyprinodon_variegatus
ENSPVAG00000003847	DDB1	100	88.179	ENSDARG00000074431	ddb1	100	88.297	Danio_rerio
ENSPVAG00000003847	DDB1	94	99.163	ENSDNOG00000014884	DDB1	97	99.163	Dasypus_novemcinctus
ENSPVAG00000003847	DDB1	84	99.591	ENSDORG00000000127	Ddb1	100	99.591	Dipodomys_ordii
ENSPVAG00000003847	DDB1	100	60.961	FBgn0260962	pic	100	60.752	Drosophila_melanogaster
ENSPVAG00000003847	DDB1	71	99.213	ENSETEG00000001053	-	71	99.213	Echinops_telfairi
ENSPVAG00000003847	DDB1	78	84.814	ENSEBUG00000014593	ddb1	97	84.814	Eptatretus_burgeri
ENSPVAG00000003847	DDB1	100	99.649	ENSEASG00005008184	DDB1	100	99.649	Equus_asinus_asinus
ENSPVAG00000003847	DDB1	100	99.561	ENSECAG00000012136	DDB1	100	99.561	Equus_caballus
ENSPVAG00000003847	DDB1	85	97.643	ENSEEUG00000003194	DDB1	85	97.643	Erinaceus_europaeus
ENSPVAG00000003847	DDB1	100	91.053	ENSELUG00000023868	ddb1	100	91.053	Esox_lucius
ENSPVAG00000003847	DDB1	100	99.825	ENSFCAG00000029716	DDB1	100	99.825	Felis_catus
ENSPVAG00000003847	DDB1	100	96.763	ENSFALG00000011981	DDB1	100	96.763	Ficedula_albicollis
ENSPVAG00000003847	DDB1	100	99.035	ENSFDAG00000005128	DDB1	100	99.035	Fukomys_damarensis
ENSPVAG00000003847	DDB1	90	90.588	ENSFHEG00000022133	ddb1	98	90.588	Fundulus_heteroclitus
ENSPVAG00000003847	DDB1	79	93.980	ENSGMOG00000019386	ddb1	94	93.980	Gadus_morhua
ENSPVAG00000003847	DDB1	100	96.930	ENSGALG00000042333	DDB1	100	96.930	Gallus_gallus
ENSPVAG00000003847	DDB1	94	91.053	ENSGAFG00000013142	ddb1	99	91.053	Gambusia_affinis
ENSPVAG00000003847	DDB1	96	90.467	ENSGACG00000017182	ddb1	100	90.467	Gasterosteus_aculeatus
ENSPVAG00000003847	DDB1	95	97.601	ENSGAGG00000014124	DDB1	100	97.601	Gopherus_agassizii
ENSPVAG00000003847	DDB1	100	99.737	ENSGGOG00000004052	DDB1	100	99.737	Gorilla_gorilla
ENSPVAG00000003847	DDB1	100	91.316	ENSHBUG00000008873	ddb1	100	91.316	Haplochromis_burtoni
ENSPVAG00000003847	DDB1	100	98.947	ENSHGLG00000018430	DDB1	100	98.947	Heterocephalus_glaber_female
ENSPVAG00000003847	DDB1	100	97.895	ENSHGLG00100014475	DDB1	100	97.895	Heterocephalus_glaber_male
ENSPVAG00000003847	DDB1	94	90.799	ENSHCOG00000018670	ddb1	98	90.799	Hippocampus_comes
ENSPVAG00000003847	DDB1	100	90.351	ENSIPUG00000005612	DDB1	100	90.351	Ictalurus_punctatus
ENSPVAG00000003847	DDB1	100	99.737	ENSSTOG00000007552	DDB1	100	99.737	Ictidomys_tridecemlineatus
ENSPVAG00000003847	DDB1	100	99.561	ENSJJAG00000017769	Ddb1	100	99.561	Jaculus_jaculus
ENSPVAG00000003847	DDB1	94	91.146	ENSKMAG00000002315	ddb1	99	91.146	Kryptolebias_marmoratus
ENSPVAG00000003847	DDB1	85	91.295	ENSLBEG00000017065	ddb1	99	91.295	Labrus_bergylta
ENSPVAG00000003847	DDB1	100	93.433	ENSLACG00000017611	DDB1	100	93.433	Latimeria_chalumnae
ENSPVAG00000003847	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSPVAG00000003847	DDB1	100	99.561	ENSLAFG00000011513	DDB1	100	99.561	Loxodonta_africana
ENSPVAG00000003847	DDB1	100	99.737	ENSMFAG00000042035	DDB1	100	99.737	Macaca_fascicularis
ENSPVAG00000003847	DDB1	99	99.735	ENSMMUG00000002691	DDB1	99	99.735	Macaca_mulatta
ENSPVAG00000003847	DDB1	100	99.737	ENSMNEG00000031559	DDB1	100	99.737	Macaca_nemestrina
ENSPVAG00000003847	DDB1	100	99.737	ENSMLEG00000044136	DDB1	100	99.737	Mandrillus_leucophaeus
ENSPVAG00000003847	DDB1	100	91.316	ENSMAMG00000014372	ddb1	100	91.316	Mastacembelus_armatus
ENSPVAG00000003847	DDB1	100	91.228	ENSMZEG00005013835	ddb1	100	91.228	Maylandia_zebra
ENSPVAG00000003847	DDB1	94	96.276	ENSMGAG00000004990	DDB1	100	96.276	Meleagris_gallopavo
ENSPVAG00000003847	DDB1	100	99.737	ENSMAUG00000012926	Ddb1	100	99.737	Mesocricetus_auratus
ENSPVAG00000003847	DDB1	100	99.737	ENSMICG00000013703	DDB1	100	99.737	Microcebus_murinus
ENSPVAG00000003847	DDB1	100	99.474	ENSMOCG00000020499	Ddb1	100	99.474	Microtus_ochrogaster
ENSPVAG00000003847	DDB1	86	91.633	ENSMMOG00000001758	ddb1	99	91.633	Mola_mola
ENSPVAG00000003847	DDB1	100	89.100	ENSMODG00000020353	DDB1	100	89.100	Monodelphis_domestica
ENSPVAG00000003847	DDB1	100	91.316	ENSMALG00000014071	ddb1	100	91.316	Monopterus_albus
ENSPVAG00000003847	DDB1	100	99.649	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.649	Mus_caroli
ENSPVAG00000003847	DDB1	100	99.561	ENSMUSG00000024740	Ddb1	100	99.561	Mus_musculus
ENSPVAG00000003847	DDB1	100	99.649	MGP_PahariEiJ_G0014189	Ddb1	100	99.649	Mus_pahari
ENSPVAG00000003847	DDB1	100	99.649	MGP_SPRETEiJ_G0023609	Ddb1	100	99.649	Mus_spretus
ENSPVAG00000003847	DDB1	100	96.491	ENSMPUG00000014200	DDB1	100	96.491	Mustela_putorius_furo
ENSPVAG00000003847	DDB1	100	99.211	ENSMLUG00000013232	DDB1	100	99.211	Myotis_lucifugus
ENSPVAG00000003847	DDB1	100	99.298	ENSNGAG00000009384	Ddb1	100	99.298	Nannospalax_galili
ENSPVAG00000003847	DDB1	100	91.404	ENSNBRG00000019581	ddb1	100	91.404	Neolamprologus_brichardi
ENSPVAG00000003847	DDB1	100	96.615	ENSNLEG00000002022	DDB1	100	96.615	Nomascus_leucogenys
ENSPVAG00000003847	DDB1	91	99.648	ENSMEUG00000001099	DDB1	93	99.648	Notamacropus_eugenii
ENSPVAG00000003847	DDB1	90	90.883	ENSOPRG00000008254	DDB1	90	90.883	Ochotona_princeps
ENSPVAG00000003847	DDB1	100	98.947	ENSODEG00000002419	DDB1	100	98.947	Octodon_degus
ENSPVAG00000003847	DDB1	100	91.316	ENSONIG00000005804	ddb1	100	91.316	Oreochromis_niloticus
ENSPVAG00000003847	DDB1	91	97.965	ENSOANG00000004897	DDB1	100	97.965	Ornithorhynchus_anatinus
ENSPVAG00000003847	DDB1	100	99.737	ENSOCUG00000001667	DDB1	100	99.737	Oryctolagus_cuniculus
ENSPVAG00000003847	DDB1	96	89.734	ENSORLG00000001399	ddb1	98	90.970	Oryzias_latipes
ENSPVAG00000003847	DDB1	96	89.643	ENSORLG00020001277	ddb1	97	89.643	Oryzias_latipes_hni
ENSPVAG00000003847	DDB1	94	90.791	ENSORLG00015002080	ddb1	99	90.791	Oryzias_latipes_hsok
ENSPVAG00000003847	DDB1	96	89.608	ENSOMEG00000006181	ddb1	99	89.608	Oryzias_melastigma
ENSPVAG00000003847	DDB1	100	99.561	ENSOGAG00000016103	DDB1	100	99.561	Otolemur_garnettii
ENSPVAG00000003847	DDB1	99	99.644	ENSOARG00000011716	DDB1	98	99.644	Ovis_aries
ENSPVAG00000003847	DDB1	100	99.737	ENSPPAG00000035343	DDB1	100	99.737	Pan_paniscus
ENSPVAG00000003847	DDB1	100	99.825	ENSPPRG00000013300	DDB1	100	99.825	Panthera_pardus
ENSPVAG00000003847	DDB1	98	99.821	ENSPTIG00000006909	DDB1	98	99.821	Panthera_tigris_altaica
ENSPVAG00000003847	DDB1	100	99.737	ENSPTRG00000003737	DDB1	100	99.737	Pan_troglodytes
ENSPVAG00000003847	DDB1	100	99.737	ENSPANG00000000242	DDB1	100	99.737	Papio_anubis
ENSPVAG00000003847	DDB1	94	91.146	ENSPKIG00000019213	ddb1	94	91.146	Paramormyrops_kingsleyae
ENSPVAG00000003847	DDB1	98	96.886	ENSPSIG00000013275	DDB1	100	96.886	Pelodiscus_sinensis
ENSPVAG00000003847	DDB1	86	91.327	ENSPMGG00000021179	ddb1	99	91.327	Periophthalmus_magnuspinnatus
ENSPVAG00000003847	DDB1	100	99.737	ENSPEMG00000012241	Ddb1	100	99.737	Peromyscus_maniculatus_bairdii
ENSPVAG00000003847	DDB1	89	86.640	ENSPMAG00000008479	ddb1	100	86.640	Petromyzon_marinus
ENSPVAG00000003847	DDB1	100	98.860	ENSPCIG00000002643	DDB1	100	98.860	Phascolarctos_cinereus
ENSPVAG00000003847	DDB1	100	90.710	ENSPFOG00000002768	ddb1	100	90.710	Poecilia_formosa
ENSPVAG00000003847	DDB1	100	90.526	ENSPLAG00000017227	ddb1	100	90.526	Poecilia_latipinna
ENSPVAG00000003847	DDB1	100	90.526	ENSPMEG00000011398	ddb1	100	90.526	Poecilia_mexicana
ENSPVAG00000003847	DDB1	94	91.163	ENSPREG00000004440	ddb1	98	91.163	Poecilia_reticulata
ENSPVAG00000003847	DDB1	100	94.764	ENSPPYG00000003193	DDB1	100	94.764	Pongo_abelii
ENSPVAG00000003847	DDB1	85	99.552	ENSPCAG00000011040	DDB1	85	99.552	Procavia_capensis
ENSPVAG00000003847	DDB1	100	98.161	ENSPCOG00000015176	DDB1	100	98.161	Propithecus_coquereli
ENSPVAG00000003847	DDB1	94	91.146	ENSPNAG00000006635	ddb1	97	91.146	Pygocentrus_nattereri
ENSPVAG00000003847	DDB1	100	99.649	ENSRNOG00000020715	Ddb1	100	99.649	Rattus_norvegicus
ENSPVAG00000003847	DDB1	100	99.737	ENSRBIG00000033611	DDB1	100	99.737	Rhinopithecus_bieti
ENSPVAG00000003847	DDB1	100	99.737	ENSRROG00000041407	DDB1	100	99.737	Rhinopithecus_roxellana
ENSPVAG00000003847	DDB1	100	99.649	ENSSBOG00000019775	DDB1	100	99.649	Saimiri_boliviensis_boliviensis
ENSPVAG00000003847	DDB1	94	96.822	ENSSHAG00000011600	DDB1	100	96.822	Sarcophilus_harrisii
ENSPVAG00000003847	DDB1	94	91.264	ENSSFOG00015011151	ddb1	97	91.264	Scleropages_formosus
ENSPVAG00000003847	DDB1	100	90.877	ENSSMAG00000009495	ddb1	100	90.877	Scophthalmus_maximus
ENSPVAG00000003847	DDB1	100	91.228	ENSSDUG00000004642	ddb1	100	91.228	Seriola_dumerili
ENSPVAG00000003847	DDB1	100	91.228	ENSSLDG00000015804	ddb1	100	91.228	Seriola_lalandi_dorsalis
ENSPVAG00000003847	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSPVAG00000003847	DDB1	100	97.719	ENSSPUG00000019338	DDB1	100	97.719	Sphenodon_punctatus
ENSPVAG00000003847	DDB1	94	91.442	ENSSPAG00000009888	ddb1	99	91.442	Stegastes_partitus
ENSPVAG00000003847	DDB1	100	98.772	ENSSSCG00000013094	DDB1	100	98.772	Sus_scrofa
ENSPVAG00000003847	DDB1	100	96.930	ENSTGUG00000006414	DDB1	100	96.930	Taeniopygia_guttata
ENSPVAG00000003847	DDB1	94	90.121	ENSTRUG00000016682	ddb1	98	90.121	Takifugu_rubripes
ENSPVAG00000003847	DDB1	88	84.830	ENSTNIG00000009565	ddb1	99	84.830	Tetraodon_nigroviridis
ENSPVAG00000003847	DDB1	92	94.909	ENSTTRG00000011055	DDB1	94	94.909	Tursiops_truncatus
ENSPVAG00000003847	DDB1	94	99.535	ENSUAMG00000017793	DDB1	93	99.535	Ursus_americanus
ENSPVAG00000003847	DDB1	94	99.535	ENSUMAG00000011788	DDB1	98	99.535	Ursus_maritimus
ENSPVAG00000003847	DDB1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSPVAG00000003847	DDB1	100	99.737	ENSVVUG00000004987	DDB1	100	99.737	Vulpes_vulpes
ENSPVAG00000003847	DDB1	100	93.094	ENSXETG00000008820	ddb1	100	93.094	Xenopus_tropicalis
ENSPVAG00000003847	DDB1	86	91.122	ENSXCOG00000013956	ddb1	99	91.122	Xiphophorus_couchianus
ENSPVAG00000003847	DDB1	94	91.053	ENSXMAG00000000022	ddb1	99	91.053	Xiphophorus_maculatus