EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000003867 (Gene tree)
Gene ID: -
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 6047 bases
Position: chrGeneScaffold_1476:185096-191142
Accession: 105306300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000003657	MMR_HSR1	PF01926.23	7.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000003865	RAB5C-201	651	-	ENSPVAP00000003657	216 (aa)	XP_011379523	UPI000155F2C6

Gene Model

Click here to download ENSPVAG00000003867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000003867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000003867	RAB5C	90	42.512	ENSPVAG00000009645	RAB11B	94	42.512
ENSPVAG00000003867	RAB5C	100	87.037	ENSPVAG00000006730	RAB5A	100	87.037
ENSPVAG00000003867	RAB5C	77	42.442	ENSPVAG00000000951	RAB7A	83	42.442
ENSPVAG00000003867	RAB5C	75	36.585	ENSPVAG00000016854	RAB39B	77	36.585
ENSPVAG00000003867	RAB5C	62	30.935	ENSPVAG00000017937	ARF6	93	30.935
ENSPVAG00000003867	RAB5C	65	32.886	ENSPVAG00000014624	-	96	32.886
ENSPVAG00000003867	RAB5C	84	40.110	ENSPVAG00000011095	-	90	40.110
ENSPVAG00000003867	RAB5C	55	31.967	ENSPVAG00000015922	ARL8B	62	31.967
ENSPVAG00000003867	RAB5C	75	33.129	ENSPVAG00000013668	KRAS	85	33.129
ENSPVAG00000003867	RAB5C	74	34.756	ENSPVAG00000004539	-	67	34.756
ENSPVAG00000003867	RAB5C	83	39.459	ENSPVAG00000005455	RAB30	91	39.459
ENSPVAG00000003867	RAB5C	70	37.500	ENSPVAG00000017693	RAB23	64	37.500
ENSPVAG00000003867	RAB5C	73	30.061	ENSPVAG00000017520	DNAJC27	60	30.061
ENSPVAG00000003867	RAB5C	77	33.333	ENSPVAG00000013319	RERG	84	33.333
ENSPVAG00000003867	RAB5C	71	46.104	ENSPVAG00000017337	RAB21	98	44.571
ENSPVAG00000003867	RAB5C	75	39.759	ENSPVAG00000004420	RAB33A	70	39.759
ENSPVAG00000003867	RAB5C	77	44.311	ENSPVAG00000000273	RAB2B	77	44.311
ENSPVAG00000003867	RAB5C	88	36.869	ENSPVAG00000010331	RAB25	98	36.869
ENSPVAG00000003867	RAB5C	94	39.806	ENSPVAG00000017342	RAB6A	98	39.806
ENSPVAG00000003867	RAB5C	93	38.647	ENSPVAG00000009586	RAB33B	89	38.647
ENSPVAG00000003867	RAB5C	89	37.949	ENSPVAG00000003103	RAB35	96	37.949
ENSPVAG00000003867	RAB5C	73	31.875	ENSPVAG00000002921	RAB34	62	31.875
ENSPVAG00000003867	RAB5C	85	38.421	ENSPVAG00000002757	RAB12	90	36.000
ENSPVAG00000003867	RAB5C	77	32.544	ENSPVAG00000003225	DIRAS3	72	32.544
ENSPVAG00000003867	RAB5C	89	34.848	ENSPVAG00000011751	RAB9A	97	34.848

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000003867	RAB5C	100	99.537	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSPVAG00000003867	RAB5C	99	89.302	ENSAPOG00000016864	rab5c	98	91.628	Acanthochromis_polyacanthus
ENSPVAG00000003867	RAB5C	100	99.537	ENSAMEG00000006003	RAB5C	100	99.537	Ailuropoda_melanoleuca
ENSPVAG00000003867	RAB5C	99	88.889	ENSACIG00000010896	rab5c	98	90.741	Amphilophus_citrinellus
ENSPVAG00000003867	RAB5C	99	89.352	ENSAOCG00000016614	rab5c	98	91.667	Amphiprion_ocellaris
ENSPVAG00000003867	RAB5C	97	89.100	ENSAPEG00000017868	-	97	91.469	Amphiprion_percula
ENSPVAG00000003867	RAB5C	100	89.908	ENSATEG00000001937	rab5c	100	91.284	Anabas_testudineus
ENSPVAG00000003867	RAB5C	94	99.510	ENSANAG00000025390	RAB5C	100	99.510	Aotus_nancymaae
ENSPVAG00000003867	RAB5C	96	89.573	ENSACLG00000008615	-	99	89.041	Astatotilapia_calliptera
ENSPVAG00000003867	RAB5C	99	87.963	ENSACLG00000002706	rab5c	98	90.741	Astatotilapia_calliptera
ENSPVAG00000003867	RAB5C	99	89.862	ENSAMXG00000043717	rab5c	98	91.705	Astyanax_mexicanus
ENSPVAG00000003867	RAB5C	96	88.571	ENSAMXG00000037267	-	99	90.952	Astyanax_mexicanus
ENSPVAG00000003867	RAB5C	100	99.537	ENSBTAG00000006982	RAB5C	100	99.537	Bos_taurus
ENSPVAG00000003867	RAB5C	99	75.814	WBGene00004268	rab-5	99	75.814	Caenorhabditis_elegans
ENSPVAG00000003867	RAB5C	100	99.074	ENSCAFG00000015629	RAB5C	100	99.074	Canis_familiaris
ENSPVAG00000003867	RAB5C	100	99.074	ENSCAFG00020013537	RAB5C	100	99.074	Canis_lupus_dingo
ENSPVAG00000003867	RAB5C	100	99.537	ENSCHIG00000012960	RAB5C	100	99.537	Capra_hircus
ENSPVAG00000003867	RAB5C	100	100.000	ENSTSYG00000030531	RAB5C	100	100.000	Carlito_syrichta
ENSPVAG00000003867	RAB5C	100	99.074	ENSCCAG00000025940	RAB5C	100	99.074	Cebus_capucinus
ENSPVAG00000003867	RAB5C	100	99.537	ENSCATG00000040873	RAB5C	100	99.537	Cercocebus_atys
ENSPVAG00000003867	RAB5C	100	97.685	ENSCLAG00000016650	RAB5C	100	97.685	Chinchilla_lanigera
ENSPVAG00000003867	RAB5C	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSPVAG00000003867	RAB5C	99	76.636	ENSCING00000003340	-	99	76.636	Ciona_intestinalis
ENSPVAG00000003867	RAB5C	99	75.000	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSPVAG00000003867	RAB5C	100	98.611	ENSCGRG00001014226	Rab5c	100	98.611	Cricetulus_griseus_chok1gshd
ENSPVAG00000003867	RAB5C	100	98.611	ENSCGRG00000007534	Rab5c	100	98.611	Cricetulus_griseus_crigri
ENSPVAG00000003867	RAB5C	99	91.204	ENSCSEG00000017024	rab5c	98	91.204	Cynoglossus_semilaevis
ENSPVAG00000003867	RAB5C	99	89.352	ENSCVAG00000009550	rab5c	98	91.204	Cyprinodon_variegatus
ENSPVAG00000003867	RAB5C	100	99.074	ENSDNOG00000038853	RAB5C	100	99.074	Dasypus_novemcinctus
ENSPVAG00000003867	RAB5C	100	99.074	ENSDORG00000006819	Rab5c	100	99.074	Dipodomys_ordii
ENSPVAG00000003867	RAB5C	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSPVAG00000003867	RAB5C	99	79.535	ENSEBUG00000014794	rab5c	100	79.535	Eptatretus_burgeri
ENSPVAG00000003867	RAB5C	100	99.537	ENSEASG00005009281	RAB5C	100	99.537	Equus_asinus_asinus
ENSPVAG00000003867	RAB5C	100	100.000	ENSECAG00000025054	RAB5C	100	100.000	Equus_caballus
ENSPVAG00000003867	RAB5C	100	99.537	ENSEEUG00000002790	RAB5C	100	99.537	Erinaceus_europaeus
ENSPVAG00000003867	RAB5C	99	87.963	ENSELUG00000018516	rab5c	99	90.278	Esox_lucius
ENSPVAG00000003867	RAB5C	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSPVAG00000003867	RAB5C	100	99.537	ENSFCAG00000002148	RAB5C	100	99.537	Felis_catus
ENSPVAG00000003867	RAB5C	100	95.833	ENSFDAG00000021541	RAB5C	100	95.833	Fukomys_damarensis
ENSPVAG00000003867	RAB5C	99	89.352	ENSFHEG00000012117	rab5c	98	91.204	Fundulus_heteroclitus
ENSPVAG00000003867	RAB5C	99	91.244	ENSFHEG00000015268	-	99	91.244	Fundulus_heteroclitus
ENSPVAG00000003867	RAB5C	78	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSPVAG00000003867	RAB5C	99	87.963	ENSGMOG00000015096	rab5c	98	90.741	Gadus_morhua
ENSPVAG00000003867	RAB5C	99	89.815	ENSGAFG00000000884	rab5c	98	91.667	Gambusia_affinis
ENSPVAG00000003867	RAB5C	96	91.429	ENSGAFG00000003642	-	99	88.636	Gambusia_affinis
ENSPVAG00000003867	RAB5C	87	94.681	ENSGACG00000008659	rab5c	98	87.037	Gasterosteus_aculeatus
ENSPVAG00000003867	RAB5C	100	99.537	ENSGGOG00000005472	RAB5C	100	99.537	Gorilla_gorilla
ENSPVAG00000003867	RAB5C	99	87.963	ENSHBUG00000002014	rab5c	98	90.741	Haplochromis_burtoni
ENSPVAG00000003867	RAB5C	96	89.573	ENSHBUG00000006823	-	99	89.041	Haplochromis_burtoni
ENSPVAG00000003867	RAB5C	100	95.370	ENSHGLG00000012067	RAB5C	100	95.370	Heterocephalus_glaber_female
ENSPVAG00000003867	RAB5C	99	89.862	ENSHCOG00000004662	rab5c	97	91.244	Hippocampus_comes
ENSPVAG00000003867	RAB5C	97	82.075	ENSHCOG00000020238	-	100	80.455	Hippocampus_comes
ENSPVAG00000003867	RAB5C	96	87.619	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSPVAG00000003867	RAB5C	100	98.148	ENSSTOG00000006620	RAB5C	100	98.148	Ictidomys_tridecemlineatus
ENSPVAG00000003867	RAB5C	100	99.537	ENSJJAG00000021181	Rab5c	100	99.537	Jaculus_jaculus
ENSPVAG00000003867	RAB5C	99	88.889	ENSKMAG00000020038	rab5c	98	91.204	Kryptolebias_marmoratus
ENSPVAG00000003867	RAB5C	99	88.479	ENSKMAG00000017417	-	99	88.479	Kryptolebias_marmoratus
ENSPVAG00000003867	RAB5C	99	90.278	ENSLBEG00000004128	rab5c	98	92.130	Labrus_bergylta
ENSPVAG00000003867	RAB5C	100	88.073	ENSLBEG00000010408	-	99	88.073	Labrus_bergylta
ENSPVAG00000003867	RAB5C	99	93.458	ENSLOCG00000012566	rab5c	100	93.458	Lepisosteus_oculatus
ENSPVAG00000003867	RAB5C	100	99.537	ENSMFAG00000039627	RAB5C	100	99.537	Macaca_fascicularis
ENSPVAG00000003867	RAB5C	100	99.537	ENSMNEG00000000355	RAB5C	100	99.537	Macaca_nemestrina
ENSPVAG00000003867	RAB5C	99	88.479	ENSMAMG00000016207	-	99	88.479	Mastacembelus_armatus
ENSPVAG00000003867	RAB5C	99	88.426	ENSMAMG00000022322	rab5c	98	90.741	Mastacembelus_armatus
ENSPVAG00000003867	RAB5C	96	89.573	ENSMZEG00005021090	-	99	89.041	Maylandia_zebra
ENSPVAG00000003867	RAB5C	99	87.963	ENSMZEG00005022735	rab5c	98	90.741	Maylandia_zebra
ENSPVAG00000003867	RAB5C	100	99.537	ENSMAUG00000015005	Rab5c	100	99.537	Mesocricetus_auratus
ENSPVAG00000003867	RAB5C	100	99.537	ENSMICG00000041608	RAB5C	100	99.537	Microcebus_murinus
ENSPVAG00000003867	RAB5C	100	98.611	ENSMOCG00000018531	-	100	98.611	Microtus_ochrogaster
ENSPVAG00000003867	RAB5C	100	89.908	ENSMMOG00000020621	rab5c	99	89.908	Mola_mola
ENSPVAG00000003867	RAB5C	97	84.360	ENSMALG00000006052	rab5c	96	84.186	Monopterus_albus
ENSPVAG00000003867	RAB5C	99	87.615	ENSMALG00000022348	-	99	87.615	Monopterus_albus
ENSPVAG00000003867	RAB5C	100	99.074	MGP_CAROLIEiJ_G0017184	Rab5c	100	99.074	Mus_caroli
ENSPVAG00000003867	RAB5C	100	99.074	ENSMUSG00000019173	Rab5c	100	99.074	Mus_musculus
ENSPVAG00000003867	RAB5C	100	99.074	MGP_PahariEiJ_G0018314	Rab5c	100	99.074	Mus_pahari
ENSPVAG00000003867	RAB5C	100	99.074	MGP_SPRETEiJ_G0018027	Rab5c	100	99.074	Mus_spretus
ENSPVAG00000003867	RAB5C	100	99.537	ENSMPUG00000010554	RAB5C	100	99.537	Mustela_putorius_furo
ENSPVAG00000003867	RAB5C	100	98.611	ENSNGAG00000010286	Rab5c	100	98.611	Nannospalax_galili
ENSPVAG00000003867	RAB5C	99	88.889	ENSNBRG00000018165	rab5c	98	91.667	Neolamprologus_brichardi
ENSPVAG00000003867	RAB5C	96	89.573	ENSNBRG00000016922	-	99	89.041	Neolamprologus_brichardi
ENSPVAG00000003867	RAB5C	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSPVAG00000003867	RAB5C	100	96.759	ENSODEG00000017920	RAB5C	100	96.759	Octodon_degus
ENSPVAG00000003867	RAB5C	99	88.889	ENSONIG00000001113	rab5c	98	91.667	Oreochromis_niloticus
ENSPVAG00000003867	RAB5C	100	88.532	ENSORLG00000003882	rab5c	100	89.908	Oryzias_latipes
ENSPVAG00000003867	RAB5C	100	89.450	ENSORLG00020008388	rab5c	100	89.450	Oryzias_latipes_hni
ENSPVAG00000003867	RAB5C	100	88.532	ENSORLG00015021900	rab5c	100	89.908	Oryzias_latipes_hsok
ENSPVAG00000003867	RAB5C	100	88.532	ENSOMEG00000023078	rab5c	100	89.908	Oryzias_melastigma
ENSPVAG00000003867	RAB5C	100	99.537	ENSOGAG00000009456	RAB5C	100	99.537	Otolemur_garnettii
ENSPVAG00000003867	RAB5C	100	99.537	ENSOARG00000018768	RAB5C	100	99.537	Ovis_aries
ENSPVAG00000003867	RAB5C	100	99.537	ENSPPAG00000037206	RAB5C	100	99.537	Pan_paniscus
ENSPVAG00000003867	RAB5C	100	99.537	ENSPPRG00000005745	RAB5C	100	99.537	Panthera_pardus
ENSPVAG00000003867	RAB5C	100	99.537	ENSPTIG00000008177	RAB5C	100	99.537	Panthera_tigris_altaica
ENSPVAG00000003867	RAB5C	100	99.537	ENSPTRG00000009194	RAB5C	100	99.537	Pan_troglodytes
ENSPVAG00000003867	RAB5C	99	87.963	ENSPKIG00000020112	-	99	87.963	Paramormyrops_kingsleyae
ENSPVAG00000003867	RAB5C	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSPVAG00000003867	RAB5C	99	86.111	ENSPMGG00000010792	rab5c	97	90.047	Periophthalmus_magnuspinnatus
ENSPVAG00000003867	RAB5C	100	98.611	ENSPEMG00000017971	Rab5c	100	98.611	Peromyscus_maniculatus_bairdii
ENSPVAG00000003867	RAB5C	99	78.972	ENSPMAG00000007867	rab5c	99	78.972	Petromyzon_marinus
ENSPVAG00000003867	RAB5C	99	78.829	ENSPMAG00000000008	rab5c	100	78.829	Petromyzon_marinus
ENSPVAG00000003867	RAB5C	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSPVAG00000003867	RAB5C	100	97.685	ENSPCIG00000020225	-	100	97.685	Phascolarctos_cinereus
ENSPVAG00000003867	RAB5C	99	89.815	ENSPLAG00000004790	rab5c	98	91.667	Poecilia_latipinna
ENSPVAG00000003867	RAB5C	99	90.323	ENSPLAG00000016333	-	99	90.323	Poecilia_latipinna
ENSPVAG00000003867	RAB5C	99	89.815	ENSPMEG00000011336	rab5c	98	91.667	Poecilia_mexicana
ENSPVAG00000003867	RAB5C	98	88.732	ENSPMEG00000012614	-	98	89.041	Poecilia_mexicana
ENSPVAG00000003867	RAB5C	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSPVAG00000003867	RAB5C	99	89.815	ENSPREG00000010146	rab5c	98	91.667	Poecilia_reticulata
ENSPVAG00000003867	RAB5C	100	99.537	ENSPPYG00000008398	RAB5C	100	99.537	Pongo_abelii
ENSPVAG00000003867	RAB5C	100	98.611	ENSPCAG00000016412	RAB5C	100	98.611	Procavia_capensis
ENSPVAG00000003867	RAB5C	100	98.611	ENSPCOG00000026327	RAB5C	100	98.611	Propithecus_coquereli
ENSPVAG00000003867	RAB5C	99	87.963	ENSPNYG00000010615	rab5c	98	90.741	Pundamilia_nyererei
ENSPVAG00000003867	RAB5C	96	89.573	ENSPNYG00000015851	-	99	89.041	Pundamilia_nyererei
ENSPVAG00000003867	RAB5C	99	91.244	ENSPNAG00000028138	rab5c	98	91.244	Pygocentrus_nattereri
ENSPVAG00000003867	RAB5C	97	86.792	ENSPNAG00000002218	-	99	89.151	Pygocentrus_nattereri
ENSPVAG00000003867	RAB5C	100	99.537	ENSRNOG00000018568	Rab5c	100	99.537	Rattus_norvegicus
ENSPVAG00000003867	RAB5C	100	99.537	ENSRBIG00000031376	RAB5C	100	99.537	Rhinopithecus_bieti
ENSPVAG00000003867	RAB5C	100	99.537	ENSRROG00000032895	RAB5C	100	99.537	Rhinopithecus_roxellana
ENSPVAG00000003867	RAB5C	100	99.074	ENSSBOG00000032552	-	100	99.074	Saimiri_boliviensis_boliviensis
ENSPVAG00000003867	RAB5C	100	98.148	ENSSHAG00000005267	-	100	98.148	Sarcophilus_harrisii
ENSPVAG00000003867	RAB5C	99	87.558	ENSSFOG00015009988	-	99	87.558	Scleropages_formosus
ENSPVAG00000003867	RAB5C	96	92.308	ENSSMAG00000007323	rab5c	98	90.278	Scophthalmus_maximus
ENSPVAG00000003867	RAB5C	99	91.667	ENSSDUG00000023008	rab5c	98	91.667	Seriola_dumerili
ENSPVAG00000003867	RAB5C	99	91.204	ENSSLDG00000017771	rab5c	98	91.204	Seriola_lalandi_dorsalis
ENSPVAG00000003867	RAB5C	100	96.296	ENSSPUG00000012950	-	100	96.296	Sphenodon_punctatus
ENSPVAG00000003867	RAB5C	99	89.815	ENSSPAG00000006436	rab5c	98	92.593	Stegastes_partitus
ENSPVAG00000003867	RAB5C	100	99.537	ENSSSCG00000032467	RAB5C	100	99.537	Sus_scrofa
ENSPVAG00000003867	RAB5C	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSPVAG00000003867	RAB5C	96	90.909	ENSTNIG00000011711	rab5c	95	90.909	Tetraodon_nigroviridis
ENSPVAG00000003867	RAB5C	100	99.537	ENSTBEG00000007092	RAB5C	100	99.537	Tupaia_belangeri
ENSPVAG00000003867	RAB5C	100	98.611	ENSTTRG00000006673	RAB5C	100	98.611	Tursiops_truncatus
ENSPVAG00000003867	RAB5C	100	99.537	ENSUAMG00000024343	RAB5C	100	99.537	Ursus_americanus
ENSPVAG00000003867	RAB5C	100	99.537	ENSUMAG00000023270	RAB5C	100	99.537	Ursus_maritimus
ENSPVAG00000003867	RAB5C	99	89.352	ENSXCOG00000016788	rab5c	98	91.667	Xiphophorus_couchianus
ENSPVAG00000003867	RAB5C	96	91.905	ENSXCOG00000006300	-	99	89.091	Xiphophorus_couchianus
ENSPVAG00000003867	RAB5C	99	90.783	ENSXMAG00000022179	-	99	90.783	Xiphophorus_maculatus
ENSPVAG00000003867	RAB5C	99	89.815	ENSXMAG00000003266	rab5c	98	91.667	Xiphophorus_maculatus