EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000004176 (Gene tree)
Gene ID: -
Gene Symbol: PDCD11
Alias: ALG-4|KIAA0185|RRP5
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 37143 bases
Position: chrGeneScaffold_2151:111000-148142
Accession: 13408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000003958	Suf	PF05843.14	2.4e-08	1	1
ENSPVAP00000003958	S1	PF00575.23	1.4e-69	1	5
ENSPVAP00000003958	S1	PF00575.23	1.4e-69	2	5
ENSPVAP00000003958	S1	PF00575.23	1.4e-69	3	5
ENSPVAP00000003958	S1	PF00575.23	1.4e-69	4	5
ENSPVAP00000003958	S1	PF00575.23	1.4e-69	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000004180	PDCD11-201	5619	-	ENSPVAP00000003958	1872 (aa)	-	UPI00018B4C30

Gene Model

Click here to download ENSPVAG00000004176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000004176's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000004176	PDCD11	100	86.994	ENSG00000148843	PDCD11	100	86.940	Homo_sapiens
ENSPVAG00000004176	PDCD11	99	44.309	ENSAPOG00000015629	pdcd11	99	44.309	Acanthochromis_polyacanthus
ENSPVAG00000004176	PDCD11	99	88.273	ENSAMEG00000017935	PDCD11	99	88.486	Ailuropoda_melanoleuca
ENSPVAG00000004176	PDCD11	99	44.303	ENSAOCG00000015287	pdcd11	99	44.144	Amphiprion_ocellaris
ENSPVAG00000004176	PDCD11	58	44.209	ENSAPEG00000020240	pdcd11	96	44.109	Amphiprion_percula
ENSPVAG00000004176	PDCD11	95	60.053	ENSATEG00000021043	pdcd11	99	44.116	Anabas_testudineus
ENSPVAG00000004176	PDCD11	99	54.570	ENSAPLG00000010301	PDCD11	99	54.623	Anas_platyrhynchos
ENSPVAG00000004176	PDCD11	99	53.781	ENSACAG00000004796	PDCD11	99	53.940	Anolis_carolinensis
ENSPVAG00000004176	PDCD11	99	86.393	ENSANAG00000034576	PDCD11	99	86.499	Aotus_nancymaae
ENSPVAG00000004176	PDCD11	86	64.094	ENSACLG00000018236	pdcd11	99	59.654	Astatotilapia_calliptera
ENSPVAG00000004176	PDCD11	97	41.545	ENSAMXG00000005458	pdcd11	100	41.545	Astyanax_mexicanus
ENSPVAG00000004176	PDCD11	100	85.013	ENSBTAG00000009715	PDCD11	100	85.067	Bos_taurus
ENSPVAG00000004176	PDCD11	99	86.172	ENSCJAG00000018257	PDCD11	99	86.332	Callithrix_jacchus
ENSPVAG00000004176	PDCD11	99	88.990	ENSCAFG00000010411	PDCD11	100	88.990	Canis_familiaris
ENSPVAG00000004176	PDCD11	100	88.847	ENSCAFG00020010369	PDCD11	100	88.936	Canis_lupus_dingo
ENSPVAG00000004176	PDCD11	99	84.747	ENSCHIG00000025218	PDCD11	100	84.800	Capra_hircus
ENSPVAG00000004176	PDCD11	98	76.320	ENSTSYG00000033423	PDCD11	100	76.266	Carlito_syrichta
ENSPVAG00000004176	PDCD11	91	70.213	ENSCAPG00000005386	PDCD11	99	70.148	Cavia_aperea
ENSPVAG00000004176	PDCD11	100	79.138	ENSCPOG00000010957	PDCD11	99	80.538	Cavia_porcellus
ENSPVAG00000004176	PDCD11	99	86.439	ENSCCAG00000018950	PDCD11	99	86.546	Cebus_capucinus
ENSPVAG00000004176	PDCD11	100	87.433	ENSCATG00000044331	PDCD11	100	87.380	Cercocebus_atys
ENSPVAG00000004176	PDCD11	100	80.489	ENSCLAG00000001029	PDCD11	100	80.436	Chinchilla_lanigera
ENSPVAG00000004176	PDCD11	100	87.313	ENSCSAG00000005346	PDCD11	100	87.260	Chlorocebus_sabaeus
ENSPVAG00000004176	PDCD11	80	94.574	ENSCHOG00000004796	PDCD11	90	94.574	Choloepus_hoffmanni
ENSPVAG00000004176	PDCD11	90	74.644	ENSCPBG00000024487	PDCD11	99	74.644	Chrysemys_picta_bellii
ENSPVAG00000004176	PDCD11	90	43.726	ENSCING00000002715	-	96	43.726	Ciona_intestinalis
ENSPVAG00000004176	PDCD11	100	87.207	ENSCANG00000043300	PDCD11	100	87.207	Colobus_angolensis_palliatus
ENSPVAG00000004176	PDCD11	100	79.606	ENSCGRG00001006458	Pdcd11	100	79.606	Cricetulus_griseus_chok1gshd
ENSPVAG00000004176	PDCD11	100	79.446	ENSCGRG00000003583	Pdcd11	100	79.446	Cricetulus_griseus_crigri
ENSPVAG00000004176	PDCD11	97	43.402	ENSCSEG00000010739	pdcd11	99	43.511	Cynoglossus_semilaevis
ENSPVAG00000004176	PDCD11	87	62.573	ENSCVAG00000018903	pdcd11	94	62.573	Cyprinodon_variegatus
ENSPVAG00000004176	PDCD11	99	42.455	ENSDARG00000052480	pdcd11	99	42.630	Danio_rerio
ENSPVAG00000004176	PDCD11	100	84.255	ENSDNOG00000013838	PDCD11	100	83.936	Dasypus_novemcinctus
ENSPVAG00000004176	PDCD11	100	80.874	ENSDORG00000010420	Pdcd11	100	81.140	Dipodomys_ordii
ENSPVAG00000004176	PDCD11	60	39.172	FBgn0039182	CG5728	62	39.172	Drosophila_melanogaster
ENSPVAG00000004176	PDCD11	95	72.574	ENSETEG00000000813	PDCD11	100	72.574	Echinops_telfairi
ENSPVAG00000004176	PDCD11	66	53.767	ENSEBUG00000002358	-	93	53.767	Eptatretus_burgeri
ENSPVAG00000004176	PDCD11	96	90.006	ENSEASG00005015159	PDCD11	100	90.061	Equus_asinus_asinus
ENSPVAG00000004176	PDCD11	100	89.813	ENSECAG00000020507	PDCD11	100	89.920	Equus_caballus
ENSPVAG00000004176	PDCD11	98	89.000	ENSEEUG00000009245	PDCD11	91	89.000	Erinaceus_europaeus
ENSPVAG00000004176	PDCD11	99	44.780	ENSELUG00000004211	pdcd11	99	45.045	Esox_lucius
ENSPVAG00000004176	PDCD11	99	89.269	ENSFCAG00000002384	PDCD11	99	89.162	Felis_catus
ENSPVAG00000004176	PDCD11	99	54.758	ENSFALG00000008775	PDCD11	99	55.343	Ficedula_albicollis
ENSPVAG00000004176	PDCD11	100	80.021	ENSFDAG00000009532	PDCD11	100	79.702	Fukomys_damarensis
ENSPVAG00000004176	PDCD11	84	66.216	ENSFHEG00000022997	pdcd11	94	66.216	Fundulus_heteroclitus
ENSPVAG00000004176	PDCD11	93	42.404	ENSGMOG00000004186	pdcd11	94	42.271	Gadus_morhua
ENSPVAG00000004176	PDCD11	75	54.258	ENSGALG00000008265	PDCD11	99	53.562	Gallus_gallus
ENSPVAG00000004176	PDCD11	94	48.966	ENSGAFG00000012806	pdcd11	99	48.966	Gambusia_affinis
ENSPVAG00000004176	PDCD11	99	43.856	ENSGACG00000018233	pdcd11	96	58.684	Gasterosteus_aculeatus
ENSPVAG00000004176	PDCD11	96	58.561	ENSGAGG00000024314	PDCD11	99	58.561	Gopherus_agassizii
ENSPVAG00000004176	PDCD11	100	86.727	ENSGGOG00000011621	PDCD11	100	86.674	Gorilla_gorilla
ENSPVAG00000004176	PDCD11	75	40.979	ENSHBUG00000020226	pdcd11	99	43.743	Haplochromis_burtoni
ENSPVAG00000004176	PDCD11	100	80.437	ENSHGLG00000001462	PDCD11	100	80.437	Heterocephalus_glaber_female
ENSPVAG00000004176	PDCD11	100	79.915	ENSHGLG00100018779	PDCD11	100	79.915	Heterocephalus_glaber_male
ENSPVAG00000004176	PDCD11	99	42.744	ENSHCOG00000016006	pdcd11	99	42.691	Hippocampus_comes
ENSPVAG00000004176	PDCD11	59	42.029	ENSIPUG00000015102	pdcd11	99	43.229	Ictalurus_punctatus
ENSPVAG00000004176	PDCD11	100	83.564	ENSSTOG00000014553	PDCD11	100	83.751	Ictidomys_tridecemlineatus
ENSPVAG00000004176	PDCD11	100	81.620	ENSJJAG00000015523	Pdcd11	100	81.620	Jaculus_jaculus
ENSPVAG00000004176	PDCD11	99	48.588	ENSLOCG00000011818	pdcd11	99	48.858	Lepisosteus_oculatus
ENSPVAG00000004176	PDCD11	100	83.972	ENSLAFG00000008398	PDCD11	100	84.026	Loxodonta_africana
ENSPVAG00000004176	PDCD11	100	87.527	ENSMFAG00000044058	PDCD11	100	87.473	Macaca_fascicularis
ENSPVAG00000004176	PDCD11	100	87.633	ENSMMUG00000007058	PDCD11	100	87.580	Macaca_mulatta
ENSPVAG00000004176	PDCD11	100	87.473	ENSMNEG00000040726	PDCD11	99	87.420	Macaca_nemestrina
ENSPVAG00000004176	PDCD11	100	86.126	ENSMLEG00000040978	PDCD11	100	86.126	Mandrillus_leucophaeus
ENSPVAG00000004176	PDCD11	75	41.081	ENSMAMG00000009572	pdcd11	99	44.079	Mastacembelus_armatus
ENSPVAG00000004176	PDCD11	75	40.769	ENSMZEG00005008949	pdcd11	99	43.584	Maylandia_zebra
ENSPVAG00000004176	PDCD11	99	55.892	ENSMGAG00000010482	PDCD11	99	56.104	Meleagris_gallopavo
ENSPVAG00000004176	PDCD11	100	79.283	ENSMAUG00000014924	Pdcd11	100	79.947	Mesocricetus_auratus
ENSPVAG00000004176	PDCD11	100	86.468	ENSMICG00000012421	PDCD11	100	86.468	Microcebus_murinus
ENSPVAG00000004176	PDCD11	100	79.180	ENSMOCG00000021792	Pdcd11	100	79.180	Microtus_ochrogaster
ENSPVAG00000004176	PDCD11	99	39.885	ENSMMOG00000007572	pdcd11	97	43.464	Mola_mola
ENSPVAG00000004176	PDCD11	99	63.108	ENSMODG00000011077	PDCD11	99	63.718	Monodelphis_domestica
ENSPVAG00000004176	PDCD11	82	55.524	ENSMALG00000003859	pdcd11	91	55.524	Monopterus_albus
ENSPVAG00000004176	PDCD11	100	76.805	MGP_CAROLIEiJ_G0023050	Pdcd11	100	77.082	Mus_caroli
ENSPVAG00000004176	PDCD11	100	77.172	ENSMUSG00000025047	Pdcd11	100	77.172	Mus_musculus
ENSPVAG00000004176	PDCD11	100	77.943	MGP_PahariEiJ_G0014540	Pdcd11	100	77.996	Mus_pahari
ENSPVAG00000004176	PDCD11	100	77.413	MGP_SPRETEiJ_G0023971	Pdcd11	100	77.413	Mus_spretus
ENSPVAG00000004176	PDCD11	99	88.455	ENSMPUG00000016829	PDCD11	100	88.616	Mustela_putorius_furo
ENSPVAG00000004176	PDCD11	100	89.552	ENSMLUG00000004997	PDCD11	100	89.499	Myotis_lucifugus
ENSPVAG00000004176	PDCD11	100	81.939	ENSNGAG00000018143	Pdcd11	100	82.206	Nannospalax_galili
ENSPVAG00000004176	PDCD11	79	55.030	ENSNBRG00000021596	pdcd11	93	54.318	Neolamprologus_brichardi
ENSPVAG00000004176	PDCD11	100	83.529	ENSNLEG00000026700	PDCD11	100	83.475	Nomascus_leucogenys
ENSPVAG00000004176	PDCD11	71	81.223	ENSMEUG00000013719	-	71	81.223	Notamacropus_eugenii
ENSPVAG00000004176	PDCD11	100	79.253	ENSOPRG00000010593	PDCD11	100	79.253	Ochotona_princeps
ENSPVAG00000004176	PDCD11	100	78.481	ENSODEG00000008079	PDCD11	99	78.575	Octodon_degus
ENSPVAG00000004176	PDCD11	75	41.119	ENSONIG00000018835	pdcd11	99	43.582	Oreochromis_niloticus
ENSPVAG00000004176	PDCD11	99	60.392	ENSOANG00000001636	-	99	60.466	Ornithorhynchus_anatinus
ENSPVAG00000004176	PDCD11	100	85.242	ENSOCUG00000006312	PDCD11	100	85.242	Oryctolagus_cuniculus
ENSPVAG00000004176	PDCD11	99	43.356	ENSORLG00020003642	pdcd11	99	43.197	Oryzias_latipes_hni
ENSPVAG00000004176	PDCD11	99	43.258	ENSORLG00015001618	pdcd11	99	43.152	Oryzias_latipes_hsok
ENSPVAG00000004176	PDCD11	74	43.468	ENSOMEG00000010904	pdcd11	98	43.650	Oryzias_melastigma
ENSPVAG00000004176	PDCD11	100	84.362	ENSOGAG00000008683	PDCD11	100	84.415	Otolemur_garnettii
ENSPVAG00000004176	PDCD11	99	84.693	ENSOARG00000003719	PDCD11	100	84.747	Ovis_aries
ENSPVAG00000004176	PDCD11	100	84.185	ENSPPAG00000024593	PDCD11	100	84.132	Pan_paniscus
ENSPVAG00000004176	PDCD11	99	89.429	ENSPPRG00000015133	PDCD11	99	89.322	Panthera_pardus
ENSPVAG00000004176	PDCD11	99	89.429	ENSPTIG00000011433	PDCD11	99	89.322	Panthera_tigris_altaica
ENSPVAG00000004176	PDCD11	100	86.780	ENSPTRG00000002911	PDCD11	100	86.727	Pan_troglodytes
ENSPVAG00000004176	PDCD11	100	87.633	ENSPANG00000020959	PDCD11	100	87.580	Papio_anubis
ENSPVAG00000004176	PDCD11	99	46.039	ENSPKIG00000000973	pdcd11	99	46.076	Paramormyrops_kingsleyae
ENSPVAG00000004176	PDCD11	77	57.342	ENSPSIG00000005102	PDCD11	95	57.342	Pelodiscus_sinensis
ENSPVAG00000004176	PDCD11	69	61.981	ENSPMGG00000007289	pdcd11	90	61.981	Periophthalmus_magnuspinnatus
ENSPVAG00000004176	PDCD11	100	79.329	ENSPEMG00000010315	Pdcd11	100	79.702	Peromyscus_maniculatus_bairdii
ENSPVAG00000004176	PDCD11	99	41.973	ENSPMAG00000003098	pdcd11	99	42.183	Petromyzon_marinus
ENSPVAG00000004176	PDCD11	100	67.533	ENSPCIG00000001118	PDCD11	100	67.463	Phascolarctos_cinereus
ENSPVAG00000004176	PDCD11	99	44.221	ENSPFOG00000006012	pdcd11	99	44.492	Poecilia_formosa
ENSPVAG00000004176	PDCD11	95	49.273	ENSPLAG00000014494	pdcd11	98	49.267	Poecilia_latipinna
ENSPVAG00000004176	PDCD11	93	47.938	ENSPMEG00000018177	pdcd11	98	47.208	Poecilia_mexicana
ENSPVAG00000004176	PDCD11	99	43.932	ENSPREG00000000475	pdcd11	99	44.091	Poecilia_reticulata
ENSPVAG00000004176	PDCD11	100	85.100	ENSPPYG00000002621	PDCD11	100	85.029	Pongo_abelii
ENSPVAG00000004176	PDCD11	70	84.393	ENSPCAG00000011663	PDCD11	71	84.393	Procavia_capensis
ENSPVAG00000004176	PDCD11	99	82.322	ENSPCOG00000023327	PDCD11	100	82.713	Propithecus_coquereli
ENSPVAG00000004176	PDCD11	75	40.979	ENSPNYG00000003979	pdcd11	99	43.743	Pundamilia_nyererei
ENSPVAG00000004176	PDCD11	95	45.444	ENSPNAG00000017225	pdcd11	99	45.612	Pygocentrus_nattereri
ENSPVAG00000004176	PDCD11	100	77.884	ENSRNOG00000020304	Pdcd11	99	77.937	Rattus_norvegicus
ENSPVAG00000004176	PDCD11	100	87.420	ENSRBIG00000011889	PDCD11	100	87.420	Rhinopithecus_bieti
ENSPVAG00000004176	PDCD11	100	87.420	ENSRROG00000030483	PDCD11	100	87.420	Rhinopithecus_roxellana
ENSPVAG00000004176	PDCD11	86	47.955	YMR229C	-	94	42.899	Saccharomyces_cerevisiae
ENSPVAG00000004176	PDCD11	99	87.287	ENSSBOG00000030308	PDCD11	99	87.287	Saimiri_boliviensis_boliviensis
ENSPVAG00000004176	PDCD11	99	66.261	ENSSHAG00000018258	PDCD11	99	66.384	Sarcophilus_harrisii
ENSPVAG00000004176	PDCD11	99	46.531	ENSSFOG00015003881	pdcd11	99	46.531	Scleropages_formosus
ENSPVAG00000004176	PDCD11	99	43.856	ENSSMAG00000006612	pdcd11	99	43.819	Scophthalmus_maximus
ENSPVAG00000004176	PDCD11	95	46.628	ENSSDUG00000021302	pdcd11	99	46.991	Seriola_dumerili
ENSPVAG00000004176	PDCD11	77	89.286	ENSSARG00000002540	PDCD11	71	89.286	Sorex_araneus
ENSPVAG00000004176	PDCD11	97	42.748	ENSSPAG00000017558	pdcd11	100	42.912	Stegastes_partitus
ENSPVAG00000004176	PDCD11	100	85.973	ENSSSCG00000010599	PDCD11	100	86.272	Sus_scrofa
ENSPVAG00000004176	PDCD11	74	40.930	ENSTRUG00000014291	pdcd11	99	41.033	Takifugu_rubripes
ENSPVAG00000004176	PDCD11	99	43.674	ENSTNIG00000012085	pdcd11	99	43.499	Tetraodon_nigroviridis
ENSPVAG00000004176	PDCD11	100	80.630	ENSTBEG00000001893	PDCD11	100	80.630	Tupaia_belangeri
ENSPVAG00000004176	PDCD11	99	81.876	ENSTTRG00000003356	PDCD11	99	81.828	Tursiops_truncatus
ENSPVAG00000004176	PDCD11	99	88.853	ENSUAMG00000018015	PDCD11	100	89.013	Ursus_americanus
ENSPVAG00000004176	PDCD11	100	87.021	ENSUMAG00000023567	PDCD11	100	87.181	Ursus_maritimus
ENSPVAG00000004176	PDCD11	74	89.552	ENSVPAG00000007405	PDCD11	82	89.552	Vicugna_pacos
ENSPVAG00000004176	PDCD11	99	89.097	ENSVVUG00000004457	PDCD11	100	89.097	Vulpes_vulpes
ENSPVAG00000004176	PDCD11	99	49.504	ENSXETG00000009482	pdcd11	99	49.684	Xenopus_tropicalis
ENSPVAG00000004176	PDCD11	94	41.192	ENSXCOG00000012420	pdcd11	93	48.665	Xiphophorus_couchianus
ENSPVAG00000004176	PDCD11	99	44.274	ENSXMAG00000004638	pdcd11	99	43.866	Xiphophorus_maculatus