EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000004199 (Gene tree)
Gene ID: -
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 32498 bases
Position: chrGeneScaffold_2654:112919-145416
Accession: 29011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000003976	UvrD-helicase	PF00580.21	8.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000004198	TRANK1-201	7071	-	ENSPVAP00000003976	2356 (aa)	-	UPI00018B2DE6

Gene Model

Click here to download ENSPVAG00000004199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000004199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000004199	TRANK1	99	54.447	ENSAPLG00000010356	TRANK1	95	54.287	Anas_platyrhynchos
ENSPVAG00000004199	TRANK1	100	77.204	ENSTSYG00000025860	TRANK1	80	77.332	Carlito_syrichta
ENSPVAG00000004199	TRANK1	100	75.702	ENSCLAG00000003643	TRANK1	82	75.653	Chinchilla_lanigera
ENSPVAG00000004199	TRANK1	97	68.693	ENSCPBG00000013529	TRANK1	79	68.693	Chrysemys_picta_bellii
ENSPVAG00000004199	TRANK1	100	78.235	ENSCANG00000039915	TRANK1	81	78.327	Colobus_angolensis_palliatus
ENSPVAG00000004199	TRANK1	97	75.193	ENSDNOG00000003573	TRANK1	79	75.193	Dasypus_novemcinctus
ENSPVAG00000004199	TRANK1	100	77.541	ENSEASG00005007374	TRANK1	81	77.796	Equus_asinus_asinus
ENSPVAG00000004199	TRANK1	100	77.917	ENSECAG00000018264	TRANK1	80	78.049	Equus_caballus
ENSPVAG00000004199	TRANK1	97	74.048	ENSEEUG00000008528	TRANK1	96	74.297	Erinaceus_europaeus
ENSPVAG00000004199	TRANK1	99	55.044	ENSFALG00000002875	TRANK1	80	55.203	Ficedula_albicollis
ENSPVAG00000004199	TRANK1	66	60.883	ENSGALG00000037629	TRANK1	70	60.777	Gallus_gallus
ENSPVAG00000004199	TRANK1	99	60.857	ENSGAGG00000009012	TRANK1	89	60.656	Gopherus_agassizii
ENSPVAG00000004199	TRANK1	99	46.295	ENSLOCG00000004808	TRANK1	81	46.405	Lepisosteus_oculatus
ENSPVAG00000004199	TRANK1	99	55.620	ENSMGAG00000011934	TRANK1	80	55.723	Meleagris_gallopavo
ENSPVAG00000004199	TRANK1	100	78.048	ENSMLUG00000003537	TRANK1	82	78.096	Myotis_lucifugus
ENSPVAG00000004199	TRANK1	100	75.786	ENSODEG00000003882	TRANK1	80	75.737	Octodon_degus
ENSPVAG00000004199	TRANK1	99	59.784	ENSPSIG00000010217	TRANK1	80	59.809	Pelodiscus_sinensis
ENSPVAG00000004199	TRANK1	81	70.345	ENSPCAG00000002172	-	87	70.345	Procavia_capensis
ENSPVAG00000004199	TRANK1	100	78.235	ENSRBIG00000012281	TRANK1	81	78.327	Rhinopithecus_bieti
ENSPVAG00000004199	TRANK1	100	78.277	ENSRROG00000044487	TRANK1	81	78.369	Rhinopithecus_roxellana
ENSPVAG00000004199	TRANK1	71	76.397	ENSSARG00000007861	-	70	75.743	Sorex_araneus
ENSPVAG00000004199	TRANK1	90	62.667	ENSSPUG00000015974	TRANK1	92	72.444	Sphenodon_punctatus
ENSPVAG00000004199	TRANK1	99	55.116	ENSTGUG00000005694	TRANK1	96	55.379	Taeniopygia_guttata