EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000004539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 10593 bases
Position: chrscaffold_3582:39708-50300
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000004297	MMR_HSR1	PF01926.23	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000004539	-	711	-	ENSPVAP00000004297	237 (aa)	-	UPI00018B24FD

Gene Model

Click here to download ENSPVAG00000004539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000004539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000004539	-	76	30.102	ENSPVAG00000003103	RAB35	83	32.335
ENSPVAG00000004539	-	64	33.951	ENSPVAG00000009586	RAB33B	71	33.951
ENSPVAG00000004539	-	73	31.667	ENSPVAG00000002757	RAB12	82	30.846
ENSPVAG00000004539	-	64	35.256	ENSPVAG00000009645	RAB11B	72	35.256
ENSPVAG00000004539	-	67	34.911	ENSPVAG00000000951	RAB7A	81	34.911
ENSPVAG00000004539	-	59	36.054	ENSPVAG00000004420	RAB33A	62	36.054
ENSPVAG00000004539	-	76	32.796	ENSPVAG00000005455	RAB30	86	32.796
ENSPVAG00000004539	-	62	33.333	ENSPVAG00000011751	RAB9A	78	33.333
ENSPVAG00000004539	-	67	34.756	ENSPVAG00000003867	RAB5C	74	34.756

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000004539	-	100	86.076	ENSG00000144134	RABL2A	100	92.105	Homo_sapiens
ENSPVAG00000004539	-	100	86.920	ENSG00000079974	RABL2B	100	93.939	Homo_sapiens
ENSPVAG00000004539	-	97	71.121	ENSAPOG00000023708	rabl2	99	71.121	Acanthochromis_polyacanthus
ENSPVAG00000004539	-	98	83.966	ENSAMEG00000003173	-	99	83.966	Ailuropoda_melanoleuca
ENSPVAG00000004539	-	99	67.373	ENSACIG00000000670	rabl2	100	67.373	Amphilophus_citrinellus
ENSPVAG00000004539	-	97	71.552	ENSAOCG00000008069	rabl2	99	71.552	Amphiprion_ocellaris
ENSPVAG00000004539	-	97	70.690	ENSAPEG00000003164	rabl2	99	70.690	Amphiprion_percula
ENSPVAG00000004539	-	97	71.552	ENSATEG00000001111	rabl2	99	71.552	Anabas_testudineus
ENSPVAG00000004539	-	68	86.957	ENSACAG00000000418	-	91	86.957	Anolis_carolinensis
ENSPVAG00000004539	-	100	81.513	ENSANAG00000021001	-	99	81.513	Aotus_nancymaae
ENSPVAG00000004539	-	97	70.815	ENSACLG00000025632	rabl2	99	70.815	Astatotilapia_calliptera
ENSPVAG00000004539	-	95	72.889	ENSAMXG00000040611	rabl2	96	72.889	Astyanax_mexicanus
ENSPVAG00000004539	-	98	83.898	ENSBTAG00000004876	RABL2B	99	84.322	Bos_taurus
ENSPVAG00000004539	-	100	82.353	ENSCJAG00000018414	-	99	82.353	Callithrix_jacchus
ENSPVAG00000004539	-	98	86.695	ENSCAFG00020006938	-	99	86.695	Canis_lupus_dingo
ENSPVAG00000004539	-	98	81.743	ENSCHIG00000000591	-	99	82.158	Capra_hircus
ENSPVAG00000004539	-	100	81.092	ENSTSYG00000004323	-	99	81.092	Carlito_syrichta
ENSPVAG00000004539	-	95	83.260	ENSCPOG00000026899	-	97	83.260	Cavia_porcellus
ENSPVAG00000004539	-	100	83.193	ENSCCAG00000025944	-	99	83.193	Cebus_capucinus
ENSPVAG00000004539	-	100	82.353	ENSCATG00000034307	-	99	82.353	Cercocebus_atys
ENSPVAG00000004539	-	98	83.691	ENSCLAG00000017218	-	99	83.691	Chinchilla_lanigera
ENSPVAG00000004539	-	100	82.500	ENSCSAG00000004698	-	99	82.500	Chlorocebus_sabaeus
ENSPVAG00000004539	-	94	75.446	ENSCPBG00000011715	-	94	75.446	Chrysemys_picta_bellii
ENSPVAG00000004539	-	84	61.692	ENSCING00000004961	-	87	61.692	Ciona_intestinalis
ENSPVAG00000004539	-	81	63.021	ENSCSAVG00000006042	-	87	63.021	Ciona_savignyi
ENSPVAG00000004539	-	100	82.278	ENSCANG00000030879	-	99	82.278	Colobus_angolensis_palliatus
ENSPVAG00000004539	-	98	82.833	ENSCGRG00001021894	Rabl2	99	82.833	Cricetulus_griseus_chok1gshd
ENSPVAG00000004539	-	90	72.093	ENSCSEG00000005479	rabl2	92	71.689	Cynoglossus_semilaevis
ENSPVAG00000004539	-	94	71.300	ENSCVAG00000011432	rabl2	96	71.300	Cyprinodon_variegatus
ENSPVAG00000004539	-	90	73.023	ENSDARG00000063321	rabl2	93	73.023	Danio_rerio
ENSPVAG00000004539	-	98	86.266	ENSDNOG00000035151	-	99	86.266	Dasypus_novemcinctus
ENSPVAG00000004539	-	98	84.120	ENSDORG00000000003	Rabl2	99	84.120	Dipodomys_ordii
ENSPVAG00000004539	-	98	87.124	ENSEASG00005008239	-	99	87.124	Equus_asinus_asinus
ENSPVAG00000004539	-	98	86.695	ENSECAG00000026942	-	99	86.695	Equus_caballus
ENSPVAG00000004539	-	97	89.083	ENSFCAG00000033642	-	99	87.983	Felis_catus
ENSPVAG00000004539	-	97	82.328	ENSFDAG00000002113	-	99	82.328	Fukomys_damarensis
ENSPVAG00000004539	-	96	69.198	ENSFHEG00000015015	rabl2	85	69.198	Fundulus_heteroclitus
ENSPVAG00000004539	-	88	71.770	ENSGMOG00000018928	rabl2	100	71.770	Gadus_morhua
ENSPVAG00000004539	-	97	72.414	ENSGALG00000032458	RABL2B	99	72.414	Gallus_gallus
ENSPVAG00000004539	-	86	74.510	ENSGAFG00000005188	rabl2	95	71.749	Gambusia_affinis
ENSPVAG00000004539	-	97	69.397	ENSGACG00000012474	rabl2	99	69.397	Gasterosteus_aculeatus
ENSPVAG00000004539	-	97	70.815	ENSHBUG00000010964	rabl2	99	70.815	Haplochromis_burtoni
ENSPVAG00000004539	-	98	83.691	ENSHGLG00000005750	-	99	83.691	Heterocephalus_glaber_female
ENSPVAG00000004539	-	98	83.691	ENSHGLG00100016281	-	99	83.691	Heterocephalus_glaber_male
ENSPVAG00000004539	-	98	84.120	ENSSTOG00000002723	-	99	84.120	Ictidomys_tridecemlineatus
ENSPVAG00000004539	-	98	81.277	ENSJJAG00000010792	Rabl2	100	81.277	Jaculus_jaculus
ENSPVAG00000004539	-	97	70.690	ENSKMAG00000012723	rabl2	99	70.690	Kryptolebias_marmoratus
ENSPVAG00000004539	-	97	71.552	ENSLBEG00000003644	rabl2	99	71.552	Labrus_bergylta
ENSPVAG00000004539	-	91	75.115	ENSLACG00000003722	rabl2	92	75.115	Latimeria_chalumnae
ENSPVAG00000004539	-	92	75.688	ENSLOCG00000016767	rabl2	91	75.688	Lepisosteus_oculatus
ENSPVAG00000004539	-	100	83.544	ENSMFAG00000044775	-	99	83.544	Macaca_fascicularis
ENSPVAG00000004539	-	100	83.193	ENSMMUG00000022914	RABL2B	99	83.193	Macaca_mulatta
ENSPVAG00000004539	-	100	83.122	ENSMNEG00000028460	-	99	83.122	Macaca_nemestrina
ENSPVAG00000004539	-	100	82.700	ENSMLEG00000032621	-	99	82.700	Mandrillus_leucophaeus
ENSPVAG00000004539	-	97	71.121	ENSMAMG00000008168	rabl2	99	71.121	Mastacembelus_armatus
ENSPVAG00000004539	-	92	71.689	ENSMZEG00005019758	rabl2	95	71.689	Maylandia_zebra
ENSPVAG00000004539	-	98	81.974	ENSMAUG00000010955	Rabl2	99	81.974	Mesocricetus_auratus
ENSPVAG00000004539	-	100	86.498	ENSMICG00000031301	-	99	86.498	Microcebus_murinus
ENSPVAG00000004539	-	98	83.621	ENSMOCG00000002775	Rabl2	99	83.621	Microtus_ochrogaster
ENSPVAG00000004539	-	90	83.721	ENSMODG00000010838	-	93	83.721	Monodelphis_domestica
ENSPVAG00000004539	-	97	69.828	ENSMALG00000005944	rabl2	99	69.828	Monopterus_albus
ENSPVAG00000004539	-	98	80.687	MGP_CAROLIEiJ_G0020176	Rabl2	98	80.687	Mus_caroli
ENSPVAG00000004539	-	98	80.687	ENSMUSG00000022621	Rabl2	99	80.687	Mus_musculus
ENSPVAG00000004539	-	98	81.545	MGP_PahariEiJ_G0020181	Rabl2	99	81.545	Mus_pahari
ENSPVAG00000004539	-	98	80.687	MGP_SPRETEiJ_G0021073	Rabl2	99	80.687	Mus_spretus
ENSPVAG00000004539	-	98	86.266	ENSMPUG00000001806	-	99	86.266	Mustela_putorius_furo
ENSPVAG00000004539	-	95	81.333	ENSNGAG00000012843	Rabl2	92	81.333	Nannospalax_galili
ENSPVAG00000004539	-	97	70.815	ENSNBRG00000000489	rabl2	99	70.815	Neolamprologus_brichardi
ENSPVAG00000004539	-	100	83.122	ENSNLEG00000030435	-	99	83.122	Nomascus_leucogenys
ENSPVAG00000004539	-	95	84.141	ENSODEG00000015650	-	96	84.141	Octodon_degus
ENSPVAG00000004539	-	99	70.124	ENSONIG00000014885	rabl2	99	71.245	Oreochromis_niloticus
ENSPVAG00000004539	-	92	70.320	ENSORLG00000009874	rabl2	92	70.320	Oryzias_latipes
ENSPVAG00000004539	-	92	70.320	ENSORLG00020001721	rabl2	92	70.320	Oryzias_latipes_hni
ENSPVAG00000004539	-	92	70.320	ENSORLG00015014268	rabl2	92	70.320	Oryzias_latipes_hsok
ENSPVAG00000004539	-	92	71.689	ENSOMEG00000008576	rabl2	95	71.689	Oryzias_melastigma
ENSPVAG00000004539	-	100	85.714	ENSOGAG00000009123	-	99	85.714	Otolemur_garnettii
ENSPVAG00000004539	-	97	88.646	ENSPPRG00000014642	-	96	88.646	Panthera_pardus
ENSPVAG00000004539	-	97	89.083	ENSPTIG00000018747	-	99	87.983	Panthera_tigris_altaica
ENSPVAG00000004539	-	100	85.654	ENSPTRG00000014555	-	99	85.654	Pan_troglodytes
ENSPVAG00000004539	-	100	84.810	ENSPANG00000036121	-	99	84.810	Papio_anubis
ENSPVAG00000004539	-	91	75.000	ENSPKIG00000025372	rabl2	91	75.000	Paramormyrops_kingsleyae
ENSPVAG00000004539	-	94	76.233	ENSPSIG00000014041	-	93	76.233	Pelodiscus_sinensis
ENSPVAG00000004539	-	88	71.292	ENSPMGG00000012946	rabl2	96	71.292	Periophthalmus_magnuspinnatus
ENSPVAG00000004539	-	98	82.833	ENSPEMG00000024045	Rabl2	99	82.833	Peromyscus_maniculatus_bairdii
ENSPVAG00000004539	-	94	78.261	ENSPCIG00000012436	-	90	78.261	Phascolarctos_cinereus
ENSPVAG00000004539	-	93	71.749	ENSPFOG00000017960	rabl2	95	71.749	Poecilia_formosa
ENSPVAG00000004539	-	93	72.398	ENSPLAG00000015685	rabl2	95	72.398	Poecilia_latipinna
ENSPVAG00000004539	-	93	72.398	ENSPMEG00000004703	rabl2	95	72.398	Poecilia_mexicana
ENSPVAG00000004539	-	86	73.301	ENSPREG00000014761	rabl2	96	73.301	Poecilia_reticulata
ENSPVAG00000004539	-	100	83.193	ENSPPYG00000012000	-	99	83.193	Pongo_abelii
ENSPVAG00000004539	-	100	86.134	ENSPCOG00000024865	-	99	86.134	Propithecus_coquereli
ENSPVAG00000004539	-	97	70.815	ENSPNYG00000004845	rabl2	99	70.815	Pundamilia_nyererei
ENSPVAG00000004539	-	89	76.056	ENSPNAG00000024254	rabl2	99	73.077	Pygocentrus_nattereri
ENSPVAG00000004539	-	98	81.974	ENSRNOG00000013947	Rabl2	88	81.974	Rattus_norvegicus
ENSPVAG00000004539	-	100	82.700	ENSRBIG00000033607	-	99	82.700	Rhinopithecus_bieti
ENSPVAG00000004539	-	100	83.544	ENSRROG00000031130	-	99	83.544	Rhinopithecus_roxellana
ENSPVAG00000004539	-	100	82.773	ENSSBOG00000033266	-	99	82.773	Saimiri_boliviensis_boliviensis
ENSPVAG00000004539	-	91	73.611	ENSSFOG00015020738	rabl2	92	73.853	Scleropages_formosus
ENSPVAG00000004539	-	97	70.563	ENSSMAG00000004606	rabl2	98	70.563	Scophthalmus_maximus
ENSPVAG00000004539	-	97	70.259	ENSSDUG00000014765	rabl2	99	70.259	Seriola_dumerili
ENSPVAG00000004539	-	71	91.176	ENSSSCG00000025041	-	100	91.176	Sus_scrofa
ENSPVAG00000004539	-	92	72.477	ENSTGUG00000016028	-	99	72.477	Taeniopygia_guttata
ENSPVAG00000004539	-	99	71.064	ENSTRUG00000012454	rabl2	100	71.064	Takifugu_rubripes
ENSPVAG00000004539	-	97	71.121	ENSTNIG00000017951	rabl2	99	71.121	Tetraodon_nigroviridis
ENSPVAG00000004539	-	88	87.981	ENSUAMG00000015761	-	88	87.981	Ursus_americanus
ENSPVAG00000004539	-	98	86.266	ENSUMAG00000017116	-	99	86.266	Ursus_maritimus
ENSPVAG00000004539	-	98	86.695	ENSVVUG00000025761	-	99	86.695	Vulpes_vulpes
ENSPVAG00000004539	-	94	73.778	ENSXETG00000015712	rabl2b	95	73.778	Xenopus_tropicalis
ENSPVAG00000004539	-	94	72.646	ENSXMAG00000004569	rabl2	95	72.646	Xiphophorus_maculatus