EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000004653 (Gene tree)
Gene ID: -
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 9010 bases
Position: chrscaffold_10349:5653-14662
Accession: 13917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000004405	ResIII	PF04851.15	7.5e-08	1	1
ENSPVAP00000004405	DEAD	PF00270.29	3.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000004653	DDX39B-201	1287	-	ENSPVAP00000004405	428 (aa)	-	UPI00018B16DF

Gene Model

Click here to download ENSPVAG00000004653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000004653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000004653	DDX39B	99	31.235	ENSPVAG00000005421	DDX6	88	31.235
ENSPVAG00000004653	DDX39B	91	32.832	ENSPVAG00000000673	-	82	32.832
ENSPVAG00000004653	DDX39B	92	36.802	ENSPVAG00000016297	EIF4A1	95	36.802
ENSPVAG00000004653	DDX39B	100	91.121	ENSPVAG00000006950	DDX39A	100	91.355
ENSPVAG00000004653	DDX39B	87	33.155	ENSPVAG00000002640	DDX47	81	33.155
ENSPVAG00000004653	DDX39B	71	30.032	ENSPVAG00000014265	DDX25	97	30.032
ENSPVAG00000004653	DDX39B	85	38.356	ENSPVAG00000003627	EIF4A3	88	38.356
ENSPVAG00000004653	DDX39B	86	32.162	ENSPVAG00000013685	EIF4A2	90	32.162
ENSPVAG00000004653	DDX39B	77	30.117	ENSPVAG00000001932	DDX5	55	30.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000004653	DDX39B	100	99.533	ENSG00000198563	DDX39B	100	99.533	Homo_sapiens
ENSPVAG00000004653	DDX39B	100	99.299	ENSAMEG00000009508	DDX39B	99	99.299	Ailuropoda_melanoleuca
ENSPVAG00000004653	DDX39B	99	93.677	ENSACIG00000004534	ddx39b	98	93.677	Amphilophus_citrinellus
ENSPVAG00000004653	DDX39B	100	92.824	ENSATEG00000012366	ddx39b	100	92.824	Anabas_testudineus
ENSPVAG00000004653	DDX39B	100	96.970	ENSACAG00000012240	DDX39B	100	96.970	Anolis_carolinensis
ENSPVAG00000004653	DDX39B	100	99.533	ENSANAG00000030372	DDX39B	100	99.533	Aotus_nancymaae
ENSPVAG00000004653	DDX39B	99	90.783	ENSACLG00000018759	ddx39b	99	90.783	Astatotilapia_calliptera
ENSPVAG00000004653	DDX39B	100	92.890	ENSAMXG00000017837	ddx39b	100	92.890	Astyanax_mexicanus
ENSPVAG00000004653	DDX39B	100	99.299	ENSBTAG00000014490	DDX39B	100	99.299	Bos_taurus
ENSPVAG00000004653	DDX39B	100	99.533	ENSCJAG00000003152	DDX39B	100	99.533	Callithrix_jacchus
ENSPVAG00000004653	DDX39B	100	99.299	ENSCAFG00000000509	DDX39B	100	100.000	Canis_familiaris
ENSPVAG00000004653	DDX39B	100	99.299	ENSCAFG00020020530	DDX39B	100	99.299	Canis_lupus_dingo
ENSPVAG00000004653	DDX39B	100	99.299	ENSCHIG00000004579	DDX39B	100	99.299	Capra_hircus
ENSPVAG00000004653	DDX39B	100	85.280	ENSTSYG00000029741	-	91	88.095	Carlito_syrichta
ENSPVAG00000004653	DDX39B	100	99.533	ENSTSYG00000010226	-	100	99.533	Carlito_syrichta
ENSPVAG00000004653	DDX39B	100	99.299	ENSCAPG00000010066	DDX39B	100	99.299	Cavia_aperea
ENSPVAG00000004653	DDX39B	100	99.299	ENSCPOG00000002335	DDX39B	100	99.299	Cavia_porcellus
ENSPVAG00000004653	DDX39B	100	99.533	ENSCCAG00000027897	DDX39B	100	99.533	Cebus_capucinus
ENSPVAG00000004653	DDX39B	99	89.882	ENSCATG00000043709	DDX39B	99	89.882	Cercocebus_atys
ENSPVAG00000004653	DDX39B	100	99.299	ENSCLAG00000014555	DDX39B	100	99.299	Chinchilla_lanigera
ENSPVAG00000004653	DDX39B	99	99.294	ENSCSAG00000008517	DDX39B	100	99.294	Chlorocebus_sabaeus
ENSPVAG00000004653	DDX39B	64	100.000	ENSCPBG00000014671	-	100	100.000	Chrysemys_picta_bellii
ENSPVAG00000004653	DDX39B	100	99.533	ENSCANG00000041217	DDX39B	100	99.533	Colobus_angolensis_palliatus
ENSPVAG00000004653	DDX39B	57	99.184	ENSCGRG00001017315	-	95	99.029	Cricetulus_griseus_chok1gshd
ENSPVAG00000004653	DDX39B	83	84.358	ENSCGRG00001021916	-	89	84.358	Cricetulus_griseus_chok1gshd
ENSPVAG00000004653	DDX39B	57	99.184	ENSCGRG00000012479	-	76	99.184	Cricetulus_griseus_crigri
ENSPVAG00000004653	DDX39B	100	92.184	ENSDARG00000036069	ddx39b	100	92.414	Danio_rerio
ENSPVAG00000004653	DDX39B	100	99.533	ENSDNOG00000010215	DDX39B	100	99.533	Dasypus_novemcinctus
ENSPVAG00000004653	DDX39B	87	99.198	ENSDORG00000004985	Ddx39b	100	99.198	Dipodomys_ordii
ENSPVAG00000004653	DDX39B	87	86.364	ENSETEG00000009649	DDX39B	87	86.364	Echinops_telfairi
ENSPVAG00000004653	DDX39B	100	99.533	ENSEASG00005017156	DDX39B	100	99.533	Equus_asinus_asinus
ENSPVAG00000004653	DDX39B	100	99.533	ENSECAG00000007750	DDX39B	100	99.533	Equus_caballus
ENSPVAG00000004653	DDX39B	100	92.343	ENSELUG00000017904	ddx39b	100	92.343	Esox_lucius
ENSPVAG00000004653	DDX39B	100	99.299	ENSFCAG00000004497	DDX39B	100	99.299	Felis_catus
ENSPVAG00000004653	DDX39B	100	99.299	ENSFDAG00000011074	DDX39B	100	99.299	Fukomys_damarensis
ENSPVAG00000004653	DDX39B	74	99.684	ENSGAGG00000001300	-	80	99.684	Gopherus_agassizii
ENSPVAG00000004653	DDX39B	100	99.533	ENSGGOG00000005989	DDX39B	100	99.533	Gorilla_gorilla
ENSPVAG00000004653	DDX39B	100	98.832	ENSHGLG00000019248	DDX39B	100	98.832	Heterocephalus_glaber_female
ENSPVAG00000004653	DDX39B	100	98.832	ENSHGLG00100011850	DDX39B	100	98.832	Heterocephalus_glaber_male
ENSPVAG00000004653	DDX39B	100	91.514	ENSIPUG00000015733	DDX39B	94	92.202	Ictalurus_punctatus
ENSPVAG00000004653	DDX39B	100	99.065	ENSSTOG00000012838	DDX39B	100	99.065	Ictidomys_tridecemlineatus
ENSPVAG00000004653	DDX39B	100	98.832	ENSJJAG00000005660	-	100	98.832	Jaculus_jaculus
ENSPVAG00000004653	DDX39B	66	79.078	ENSLBEG00000017177	-	81	79.078	Labrus_bergylta
ENSPVAG00000004653	DDX39B	99	78.251	ENSLBEG00000012254	ddx39b	99	78.220	Labrus_bergylta
ENSPVAG00000004653	DDX39B	100	89.631	ENSLACG00000002110	DDX39B	100	89.631	Latimeria_chalumnae
ENSPVAG00000004653	DDX39B	100	99.299	ENSLAFG00000014202	DDX39B	100	99.299	Loxodonta_africana
ENSPVAG00000004653	DDX39B	100	99.533	ENSMFAG00000034233	DDX39B	100	99.533	Macaca_fascicularis
ENSPVAG00000004653	DDX39B	100	99.533	ENSMMUG00000008839	DDX39B	100	99.533	Macaca_mulatta
ENSPVAG00000004653	DDX39B	100	99.533	ENSMNEG00000041059	DDX39B	100	99.533	Macaca_nemestrina
ENSPVAG00000004653	DDX39B	100	99.533	ENSMLEG00000043791	DDX39B	100	99.533	Mandrillus_leucophaeus
ENSPVAG00000004653	DDX39B	99	90.783	ENSMZEG00005017654	ddx39b	99	90.783	Maylandia_zebra
ENSPVAG00000004653	DDX39B	100	99.299	ENSMAUG00000008059	Ddx39b	100	99.299	Mesocricetus_auratus
ENSPVAG00000004653	DDX39B	100	99.533	ENSMICG00000017349	DDX39B	100	99.533	Microcebus_murinus
ENSPVAG00000004653	DDX39B	100	99.533	ENSMOCG00000011169	Ddx39b	100	99.533	Microtus_ochrogaster
ENSPVAG00000004653	DDX39B	88	99.202	ENSMODG00000015791	DDX39B	88	99.202	Monodelphis_domestica
ENSPVAG00000004653	DDX39B	100	99.533	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSPVAG00000004653	DDX39B	100	99.533	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSPVAG00000004653	DDX39B	100	99.533	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.533	Mus_spretus
ENSPVAG00000004653	DDX39B	100	99.299	ENSMPUG00000011407	DDX39B	100	99.299	Mustela_putorius_furo
ENSPVAG00000004653	DDX39B	73	100.000	ENSMLUG00000001681	DDX39B	100	100.000	Myotis_lucifugus
ENSPVAG00000004653	DDX39B	100	99.533	ENSNGAG00000022948	Ddx39b	100	99.533	Nannospalax_galili
ENSPVAG00000004653	DDX39B	100	75.467	ENSNLEG00000006094	DDX39B	100	75.467	Nomascus_leucogenys
ENSPVAG00000004653	DDX39B	86	100.000	ENSMEUG00000008264	DDX39B	86	100.000	Notamacropus_eugenii
ENSPVAG00000004653	DDX39B	100	99.299	ENSOPRG00000011923	DDX39B	100	99.299	Ochotona_princeps
ENSPVAG00000004653	DDX39B	100	99.065	ENSODEG00000018083	DDX39B	100	99.065	Octodon_degus
ENSPVAG00000004653	DDX39B	100	91.898	ENSONIG00000004740	ddx39b	100	91.898	Oreochromis_niloticus
ENSPVAG00000004653	DDX39B	55	98.312	ENSOANG00000008361	DDX39B	95	98.312	Ornithorhynchus_anatinus
ENSPVAG00000004653	DDX39B	100	95.711	ENSOCUG00000024126	DDX39B	100	95.711	Oryctolagus_cuniculus
ENSPVAG00000004653	DDX39B	84	91.711	ENSOGAG00000009067	-	100	98.457	Otolemur_garnettii
ENSPVAG00000004653	DDX39B	100	98.135	ENSOGAG00000028850	-	100	98.135	Otolemur_garnettii
ENSPVAG00000004653	DDX39B	100	99.299	ENSOARG00000008787	DDX39B	98	99.299	Ovis_aries
ENSPVAG00000004653	DDX39B	100	99.533	ENSPPAG00000043072	DDX39B	100	99.533	Pan_paniscus
ENSPVAG00000004653	DDX39B	100	99.299	ENSPPRG00000001913	DDX39B	100	99.299	Panthera_pardus
ENSPVAG00000004653	DDX39B	100	98.364	ENSPTIG00000017669	DDX39B	100	98.364	Panthera_tigris_altaica
ENSPVAG00000004653	DDX39B	100	99.533	ENSPTRG00000032509	DDX39B	100	99.533	Pan_troglodytes
ENSPVAG00000004653	DDX39B	100	99.533	ENSPANG00000018609	DDX39B	100	99.533	Papio_anubis
ENSPVAG00000004653	DDX39B	100	90.618	ENSPKIG00000011324	ddx39b	100	91.304	Paramormyrops_kingsleyae
ENSPVAG00000004653	DDX39B	100	99.299	ENSPEMG00000016905	Ddx39b	100	99.299	Peromyscus_maniculatus_bairdii
ENSPVAG00000004653	DDX39B	100	99.533	ENSPCIG00000017572	DDX39B	100	99.533	Phascolarctos_cinereus
ENSPVAG00000004653	DDX39B	100	99.533	ENSPPYG00000016433	DDX39B	100	99.533	Pongo_abelii
ENSPVAG00000004653	DDX39B	66	99.648	ENSPCAG00000003484	DDX39B	100	99.648	Procavia_capensis
ENSPVAG00000004653	DDX39B	100	99.533	ENSPCOG00000018656	DDX39B	100	99.533	Propithecus_coquereli
ENSPVAG00000004653	DDX39B	99	82.904	ENSPNYG00000010382	ddx39b	98	82.904	Pundamilia_nyererei
ENSPVAG00000004653	DDX39B	100	92.202	ENSPNAG00000026926	ddx39b	100	92.202	Pygocentrus_nattereri
ENSPVAG00000004653	DDX39B	100	99.533	ENSRNOG00000000841	Ddx39b	100	99.533	Rattus_norvegicus
ENSPVAG00000004653	DDX39B	100	89.252	ENSRBIG00000031309	DDX39B	100	89.252	Rhinopithecus_bieti
ENSPVAG00000004653	DDX39B	100	99.533	ENSRROG00000039517	DDX39B	100	99.533	Rhinopithecus_roxellana
ENSPVAG00000004653	DDX39B	100	89.252	ENSSBOG00000035513	-	100	89.252	Saimiri_boliviensis_boliviensis
ENSPVAG00000004653	DDX39B	100	99.533	ENSSHAG00000003209	DDX39B	100	99.533	Sarcophilus_harrisii
ENSPVAG00000004653	DDX39B	100	91.076	ENSSFOG00015016107	ddx39b	100	91.762	Scleropages_formosus
ENSPVAG00000004653	DDX39B	100	93.287	ENSSDUG00000011557	ddx39b	100	93.519	Seriola_dumerili
ENSPVAG00000004653	DDX39B	100	93.056	ENSSLDG00000015763	ddx39b	100	93.287	Seriola_lalandi_dorsalis
ENSPVAG00000004653	DDX39B	87	87.701	ENSSARG00000005245	DDX39B	100	87.701	Sorex_araneus
ENSPVAG00000004653	DDX39B	100	97.664	ENSSPUG00000012805	DDX39B	100	97.664	Sphenodon_punctatus
ENSPVAG00000004653	DDX39B	100	99.533	ENSSSCG00000001400	DDX39B	100	100.000	Sus_scrofa
ENSPVAG00000004653	DDX39B	100	76.402	ENSTBEG00000003721	DDX39B	100	76.402	Tupaia_belangeri
ENSPVAG00000004653	DDX39B	100	90.993	ENSTTRG00000014074	DDX39B	100	90.993	Tursiops_truncatus
ENSPVAG00000004653	DDX39B	100	86.512	ENSUAMG00000027335	DDX39B	100	86.512	Ursus_americanus
ENSPVAG00000004653	DDX39B	100	90.421	ENSUMAG00000015124	DDX39B	100	90.421	Ursus_maritimus
ENSPVAG00000004653	DDX39B	61	98.230	ENSVPAG00000009167	-	74	98.230	Vicugna_pacos
ENSPVAG00000004653	DDX39B	100	99.299	ENSVVUG00000019518	DDX39B	99	99.299	Vulpes_vulpes
ENSPVAG00000004653	DDX39B	100	84.186	ENSXETG00000002498	ddx39b	99	84.186	Xenopus_tropicalis