EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000004913 (Gene tree)
Gene ID: -
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 33094 bases
Position: chrGeneScaffold_1423:25846-58939
Accession: 10520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000004650	RRM_5	PF13893.6	5.3e-07	1	1
ENSPVAP00000004650	RRM_1	PF00076.22	2e-13	1	1
ENSPVAP00000004650	SAP	PF02037.27	7.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000004912	SAFB-201	2754	-	ENSPVAP00000004650	917 (aa)	-	UPI00018B241D

Gene Model

Click here to download ENSPVAG00000004913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000004913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000004913	SAFB	52	72.055	ENSPVAG00000004902	-	71	72.616

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000004913	SAFB	100	84.406	ENSG00000160633	SAFB	100	86.024	Homo_sapiens
ENSPVAG00000004913	SAFB	64	57.273	ENSAPOG00000022508	safb	71	57.273	Acanthochromis_polyacanthus
ENSPVAG00000004913	SAFB	100	85.668	ENSAMEG00000012254	SAFB	98	86.176	Ailuropoda_melanoleuca
ENSPVAG00000004913	SAFB	78	54.464	ENSACIG00000006247	safb	80	54.464	Amphilophus_citrinellus
ENSPVAG00000004913	SAFB	67	56.364	ENSAOCG00000006308	safb	73	57.273	Amphiprion_ocellaris
ENSPVAG00000004913	SAFB	64	56.364	ENSAPEG00000023342	safb	71	56.364	Amphiprion_percula
ENSPVAG00000004913	SAFB	69	55.455	ENSATEG00000004998	safb	71	55.455	Anabas_testudineus
ENSPVAG00000004913	SAFB	93	59.609	ENSAPLG00000005780	-	100	59.677	Anas_platyrhynchos
ENSPVAG00000004913	SAFB	89	57.075	ENSAPLG00000006355	-	99	59.237	Anas_platyrhynchos
ENSPVAG00000004913	SAFB	65	60.859	ENSACAG00000016893	-	95	51.012	Anolis_carolinensis
ENSPVAG00000004913	SAFB	100	84.004	ENSANAG00000028821	SAFB	100	86.024	Aotus_nancymaae
ENSPVAG00000004913	SAFB	56	55.455	ENSACLG00000001926	safb	72	55.455	Astatotilapia_calliptera
ENSPVAG00000004913	SAFB	71	55.118	ENSAMXG00000018154	safb	94	41.903	Astyanax_mexicanus
ENSPVAG00000004913	SAFB	100	82.590	ENSBTAG00000007875	SAFB	100	82.155	Bos_taurus
ENSPVAG00000004913	SAFB	83	82.577	ENSCJAG00000017081	SAFB	100	85.874	Callithrix_jacchus
ENSPVAG00000004913	SAFB	100	87.241	ENSCAFG00000018803	SAFB	87	86.805	Canis_familiaris
ENSPVAG00000004913	SAFB	100	87.241	ENSCAFG00020018943	SAFB	100	86.805	Canis_lupus_dingo
ENSPVAG00000004913	SAFB	100	81.502	ENSCHIG00000007262	SAFB	100	81.066	Capra_hircus
ENSPVAG00000004913	SAFB	58	76.217	ENSTSYG00000001851	-	100	75.468	Carlito_syrichta
ENSPVAG00000004913	SAFB	82	78.571	ENSCAPG00000012121	SAFB	98	78.683	Cavia_aperea
ENSPVAG00000004913	SAFB	100	79.724	ENSCPOG00000026322	SAFB	100	79.193	Cavia_porcellus
ENSPVAG00000004913	SAFB	100	84.331	ENSCCAG00000020193	SAFB	100	86.296	Cebus_capucinus
ENSPVAG00000004913	SAFB	100	84.440	ENSCATG00000029994	SAFB	100	86.567	Cercocebus_atys
ENSPVAG00000004913	SAFB	100	80.896	ENSCLAG00000007734	SAFB	100	82.070	Chinchilla_lanigera
ENSPVAG00000004913	SAFB	100	84.331	ENSCSAG00000009949	SAFB	100	84.004	Chlorocebus_sabaeus
ENSPVAG00000004913	SAFB	83	95.238	ENSCHOG00000003208	SAFB	89	95.238	Choloepus_hoffmanni
ENSPVAG00000004913	SAFB	91	56.045	ENSCPBG00000010936	-	99	56.610	Chrysemys_picta_bellii
ENSPVAG00000004913	SAFB	91	58.392	ENSCPBG00000010928	-	99	58.343	Chrysemys_picta_bellii
ENSPVAG00000004913	SAFB	95	80.966	ENSCANG00000004774	-	99	91.475	Colobus_angolensis_palliatus
ENSPVAG00000004913	SAFB	100	79.171	ENSCANG00000019754	-	100	78.844	Colobus_angolensis_palliatus
ENSPVAG00000004913	SAFB	100	77.719	ENSCGRG00001002254	Safb	100	77.399	Cricetulus_griseus_chok1gshd
ENSPVAG00000004913	SAFB	90	74.341	ENSCGRG00000011529	Safb	96	73.998	Cricetulus_griseus_crigri
ENSPVAG00000004913	SAFB	96	38.235	ENSCSEG00000019870	safb	98	38.046	Cynoglossus_semilaevis
ENSPVAG00000004913	SAFB	60	54.630	ENSCVAG00000002226	safb	70	54.630	Cyprinodon_variegatus
ENSPVAG00000004913	SAFB	73	57.895	ENSDARG00000020467	safb	95	42.826	Danio_rerio
ENSPVAG00000004913	SAFB	100	84.749	ENSDNOG00000015746	SAFB	95	86.910	Dasypus_novemcinctus
ENSPVAG00000004913	SAFB	100	75.452	ENSDORG00000016200	Safb	100	77.046	Dipodomys_ordii
ENSPVAG00000004913	SAFB	75	83.673	ENSETEG00000018679	SAFB	84	83.673	Echinops_telfairi
ENSPVAG00000004913	SAFB	100	82.684	ENSEASG00005023019	SAFB	100	82.792	Equus_asinus_asinus
ENSPVAG00000004913	SAFB	100	84.532	ENSECAG00000018659	SAFB	89	84.205	Equus_caballus
ENSPVAG00000004913	SAFB	97	38.682	ENSELUG00000022327	safb	98	41.209	Esox_lucius
ENSPVAG00000004913	SAFB	100	86.928	ENSFCAG00000011835	SAFB	100	86.492	Felis_catus
ENSPVAG00000004913	SAFB	99	59.591	ENSFALG00000013882	-	89	60.266	Ficedula_albicollis
ENSPVAG00000004913	SAFB	91	54.205	ENSFALG00000013881	-	99	56.674	Ficedula_albicollis
ENSPVAG00000004913	SAFB	100	72.645	ENSFDAG00000020306	SAFB	99	82.965	Fukomys_damarensis
ENSPVAG00000004913	SAFB	69	57.407	ENSFHEG00000004219	safb	74	57.407	Fundulus_heteroclitus
ENSPVAG00000004913	SAFB	71	47.664	ENSGMOG00000014280	safb	95	38.031	Gadus_morhua
ENSPVAG00000004913	SAFB	100	54.498	ENSGALG00000001948	-	97	58.830	Gallus_gallus
ENSPVAG00000004913	SAFB	99	59.978	ENSGALG00000013365	-	97	60.667	Gallus_gallus
ENSPVAG00000004913	SAFB	68	42.593	ENSGAFG00000016162	safb	68	56.000	Gambusia_affinis
ENSPVAG00000004913	SAFB	71	50.909	ENSGACG00000011385	safb	69	50.909	Gasterosteus_aculeatus
ENSPVAG00000004913	SAFB	73	54.074	ENSGAGG00000017702	-	100	54.124	Gopherus_agassizii
ENSPVAG00000004913	SAFB	95	57.651	ENSGAGG00000008424	-	97	58.509	Gopherus_agassizii
ENSPVAG00000004913	SAFB	100	83.896	ENSGGOG00000015109	SAFB	100	85.753	Gorilla_gorilla
ENSPVAG00000004913	SAFB	54	50.000	ENSHBUG00000009218	safb	57	54.040	Haplochromis_burtoni
ENSPVAG00000004913	SAFB	100	82.529	ENSHGLG00000015883	SAFB	100	82.208	Heterocephalus_glaber_female
ENSPVAG00000004913	SAFB	100	73.399	ENSHGLG00100004228	SAFB	100	70.985	Heterocephalus_glaber_male
ENSPVAG00000004913	SAFB	76	35.833	ENSHCOG00000001705	safb	97	36.830	Hippocampus_comes
ENSPVAG00000004913	SAFB	68	60.185	ENSIPUG00000024869	safb2	98	42.967	Ictalurus_punctatus
ENSPVAG00000004913	SAFB	93	82.048	ENSSTOG00000002783	SAFB	100	82.163	Ictidomys_tridecemlineatus
ENSPVAG00000004913	SAFB	100	78.002	ENSJJAG00000009021	Safb	98	78.299	Jaculus_jaculus
ENSPVAG00000004913	SAFB	64	52.252	ENSKMAG00000022308	safb	71	52.252	Kryptolebias_marmoratus
ENSPVAG00000004913	SAFB	97	38.996	ENSLBEG00000006015	safb	95	41.982	Labrus_bergylta
ENSPVAG00000004913	SAFB	87	49.186	ENSLACG00000018090	SAFB	100	50.790	Latimeria_chalumnae
ENSPVAG00000004913	SAFB	87	67.593	ENSLOCG00000003613	safb	85	67.593	Lepisosteus_oculatus
ENSPVAG00000004913	SAFB	99	83.134	ENSLAFG00000003840	SAFB	100	83.351	Loxodonta_africana
ENSPVAG00000004913	SAFB	100	84.548	ENSMFAG00000003885	SAFB	100	86.567	Macaca_fascicularis
ENSPVAG00000004913	SAFB	100	84.440	ENSMMUG00000017970	SAFB	100	86.567	Macaca_mulatta
ENSPVAG00000004913	SAFB	100	80.849	ENSMNEG00000035637	SAFB	100	84.211	Macaca_nemestrina
ENSPVAG00000004913	SAFB	100	78.959	ENSMLEG00000038637	SAFB	88	93.548	Mandrillus_leucophaeus
ENSPVAG00000004913	SAFB	69	52.727	ENSMAMG00000003357	safb	64	52.727	Mastacembelus_armatus
ENSPVAG00000004913	SAFB	56	55.455	ENSMZEG00005009120	safb	95	40.695	Maylandia_zebra
ENSPVAG00000004913	SAFB	97	57.684	ENSMGAG00000001101	-	100	58.082	Meleagris_gallopavo
ENSPVAG00000004913	SAFB	85	57.431	ENSMGAG00000001051	-	92	59.713	Meleagris_gallopavo
ENSPVAG00000004913	SAFB	53	82.136	ENSMAUG00000005013	Safb	100	82.546	Mesocricetus_auratus
ENSPVAG00000004913	SAFB	100	81.284	ENSMICG00000008739	-	100	84.532	Microcebus_murinus
ENSPVAG00000004913	SAFB	85	74.297	ENSMICG00000046795	-	98	90.426	Microcebus_murinus
ENSPVAG00000004913	SAFB	100	77.636	ENSMOCG00000014040	Safb	100	77.316	Microtus_ochrogaster
ENSPVAG00000004913	SAFB	100	69.607	ENSMODG00000001236	SAFB	98	69.466	Monodelphis_domestica
ENSPVAG00000004913	SAFB	93	37.696	ENSMALG00000020330	safb	98	40.611	Monopterus_albus
ENSPVAG00000004913	SAFB	100	77.316	MGP_CAROLIEiJ_G0021780	Safb	100	76.997	Mus_caroli
ENSPVAG00000004913	SAFB	100	77.423	ENSMUSG00000071054	Safb	100	77.103	Mus_musculus
ENSPVAG00000004913	SAFB	100	76.489	MGP_PahariEiJ_G0020769	Safb	100	76.915	Mus_pahari
ENSPVAG00000004913	SAFB	100	86.942	ENSMPUG00000006123	SAFB	94	86.507	Mustela_putorius_furo
ENSPVAG00000004913	SAFB	100	88.357	ENSMLUG00000001081	SAFB	100	88.357	Myotis_lucifugus
ENSPVAG00000004913	SAFB	100	75.159	ENSNGAG00000019882	Safb	100	75.265	Nannospalax_galili
ENSPVAG00000004913	SAFB	96	84.091	ENSNLEG00000013551	SAFB	100	85.960	Nomascus_leucogenys
ENSPVAG00000004913	SAFB	88	77.614	ENSOPRG00000011561	-	100	78.106	Ochotona_princeps
ENSPVAG00000004913	SAFB	100	82.818	ENSODEG00000014838	SAFB	100	82.497	Octodon_degus
ENSPVAG00000004913	SAFB	95	38.326	ENSONIG00000002318	safb	95	40.380	Oreochromis_niloticus
ENSPVAG00000004913	SAFB	90	73.918	ENSOCUG00000014628	SAFB	100	70.907	Oryctolagus_cuniculus
ENSPVAG00000004913	SAFB	64	52.727	ENSORLG00000016989	safb	71	52.727	Oryzias_latipes
ENSPVAG00000004913	SAFB	69	48.598	ENSORLG00020000404	safb	69	48.598	Oryzias_latipes_hni
ENSPVAG00000004913	SAFB	69	53.636	ENSORLG00015010733	safb	74	53.636	Oryzias_latipes_hsok
ENSPVAG00000004913	SAFB	67	53.636	ENSOMEG00000009066	safb	70	53.636	Oryzias_melastigma
ENSPVAG00000004913	SAFB	100	78.708	ENSOGAG00000027769	SAFB	100	81.257	Otolemur_garnettii
ENSPVAG00000004913	SAFB	100	78.999	ENSOARG00000007662	-	100	78.346	Ovis_aries
ENSPVAG00000004913	SAFB	78	80.028	ENSOARG00000007856	-	100	77.917	Ovis_aries
ENSPVAG00000004913	SAFB	100	84.113	ENSPPAG00000035129	SAFB	100	85.889	Pan_paniscus
ENSPVAG00000004913	SAFB	100	86.928	ENSPPRG00000017197	SAFB	100	86.492	Panthera_pardus
ENSPVAG00000004913	SAFB	95	89.796	ENSPTRG00000010335	SAFB	100	85.889	Pan_troglodytes
ENSPVAG00000004913	SAFB	100	84.440	ENSPANG00000007770	SAFB	100	86.431	Papio_anubis
ENSPVAG00000004913	SAFB	95	38.710	ENSPKIG00000009902	safb	95	42.261	Paramormyrops_kingsleyae
ENSPVAG00000004913	SAFB	100	56.632	ENSPSIG00000011679	-	100	58.174	Pelodiscus_sinensis
ENSPVAG00000004913	SAFB	99	57.053	ENSPSIG00000009367	-	97	56.663	Pelodiscus_sinensis
ENSPVAG00000004913	SAFB	100	78.122	ENSPEMG00000020428	Safb	100	77.801	Peromyscus_maniculatus_bairdii
ENSPVAG00000004913	SAFB	58	74.908	ENSPCIG00000009504	-	100	73.801	Phascolarctos_cinereus
ENSPVAG00000004913	SAFB	69	51.754	ENSPFOG00000007745	safb	91	42.050	Poecilia_formosa
ENSPVAG00000004913	SAFB	68	56.000	ENSPLAG00000001614	safb	69	57.000	Poecilia_latipinna
ENSPVAG00000004913	SAFB	69	50.877	ENSPMEG00000021023	safb	76	51.754	Poecilia_mexicana
ENSPVAG00000004913	SAFB	69	42.520	ENSPREG00000012496	safb	74	46.875	Poecilia_reticulata
ENSPVAG00000004913	SAFB	100	84.515	ENSPPYG00000009428	SAFB	100	84.188	Pongo_abelii
ENSPVAG00000004913	SAFB	100	80.130	ENSPCAG00000006475	SAFB	100	80.130	Procavia_capensis
ENSPVAG00000004913	SAFB	100	77.549	ENSPCOG00000014090	SAFB	100	81.818	Propithecus_coquereli
ENSPVAG00000004913	SAFB	72	58.716	ENSPNAG00000021838	safb	98	42.175	Pygocentrus_nattereri
ENSPVAG00000004913	SAFB	100	77.258	ENSRNOG00000050543	Safb	100	77.896	Rattus_norvegicus
ENSPVAG00000004913	SAFB	95	84.962	ENSRBIG00000042509	SAFB	100	84.962	Rhinopithecus_bieti
ENSPVAG00000004913	SAFB	100	84.548	ENSRROG00000029278	SAFB	100	86.431	Rhinopithecus_roxellana
ENSPVAG00000004913	SAFB	100	84.222	ENSSBOG00000026291	SAFB	100	86.296	Saimiri_boliviensis_boliviensis
ENSPVAG00000004913	SAFB	97	39.979	ENSSFOG00015008156	safb	86	60.550	Scleropages_formosus
ENSPVAG00000004913	SAFB	97	37.164	ENSSMAG00000009316	safb	98	40.111	Scophthalmus_maximus
ENSPVAG00000004913	SAFB	71	54.054	ENSSDUG00000009652	safb	69	54.054	Seriola_dumerili
ENSPVAG00000004913	SAFB	71	52.727	ENSSLDG00000001670	safb	71	52.727	Seriola_lalandi_dorsalis
ENSPVAG00000004913	SAFB	93	79.649	ENSSARG00000010475	SAFB	100	79.649	Sorex_araneus
ENSPVAG00000004913	SAFB	87	52.566	ENSSPUG00000009747	-	99	53.483	Sphenodon_punctatus
ENSPVAG00000004913	SAFB	68	57.263	ENSSPUG00000009820	-	94	58.870	Sphenodon_punctatus
ENSPVAG00000004913	SAFB	68	47.338	ENSSPAG00000015682	safb	73	48.244	Stegastes_partitus
ENSPVAG00000004913	SAFB	100	85.884	ENSSSCG00000013522	SAFB	99	89.730	Sus_scrofa
ENSPVAG00000004913	SAFB	93	57.565	ENSTGUG00000000489	-	97	59.765	Taeniopygia_guttata
ENSPVAG00000004913	SAFB	96	58.949	ENSTGUG00000000502	-	97	59.908	Taeniopygia_guttata
ENSPVAG00000004913	SAFB	84	40.100	ENSTRUG00000003567	safb	95	40.045	Takifugu_rubripes
ENSPVAG00000004913	SAFB	82	43.653	ENSTNIG00000015470	safb	95	43.653	Tetraodon_nigroviridis
ENSPVAG00000004913	SAFB	59	89.394	ENSTBEG00000013124	-	59	89.394	Tupaia_belangeri
ENSPVAG00000004913	SAFB	89	95.238	ENSTTRG00000013588	SAFB	88	95.238	Tursiops_truncatus
ENSPVAG00000004913	SAFB	78	92.958	ENSUAMG00000024543	SAFB	99	92.958	Ursus_americanus
ENSPVAG00000004913	SAFB	78	93.878	ENSUMAG00000009734	SAFB	84	93.878	Ursus_maritimus
ENSPVAG00000004913	SAFB	69	96.591	ENSVPAG00000012043	SAFB	75	96.591	Vicugna_pacos
ENSPVAG00000004913	SAFB	100	86.834	ENSVVUG00000013720	SAFB	87	86.398	Vulpes_vulpes
ENSPVAG00000004913	SAFB	66	49.918	ENSXETG00000008755	safb	97	51.056	Xenopus_tropicalis
ENSPVAG00000004913	SAFB	72	50.000	ENSXMAG00000003458	safb	74	50.877	Xiphophorus_maculatus