EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000004975 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 141631 bases
Position: chrGeneScaffold_3224:288254-429884
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000004706	Ago_hook	PF10427.9	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000004976	TNRC6B-201	5145	-	ENSPVAP00000004706	1715 (aa)	-	UPI00018B4014

Gene Model

Click here to download ENSPVAG00000004975's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000004975's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000004975	TNRC6B	78	34.985	ENSPVAG00000012066	TNRC6A	56	35.090
ENSPVAG00000004975	TNRC6B	51	44.330	ENSPVAG00000002008	TNRC6C	82	44.330

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000004975	TNRC6B	92	95.785	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSPVAG00000004975	TNRC6B	93	96.867	ENSAMEG00000011025	TNRC6B	93	96.867	Ailuropoda_melanoleuca
ENSPVAG00000004975	TNRC6B	90	88.127	ENSAPLG00000009347	TNRC6B	93	88.127	Anas_platyrhynchos
ENSPVAG00000004975	TNRC6B	91	78.637	ENSACAG00000007281	TNRC6B	92	78.291	Anolis_carolinensis
ENSPVAG00000004975	TNRC6B	92	95.913	ENSANAG00000035042	TNRC6B	94	95.784	Aotus_nancymaae
ENSPVAG00000004975	TNRC6B	76	51.383	ENSAMXG00000008707	tnrc6b	65	52.427	Astyanax_mexicanus
ENSPVAG00000004975	TNRC6B	92	94.508	ENSBTAG00000021076	TNRC6B	92	94.696	Bos_taurus
ENSPVAG00000004975	TNRC6B	91	95.731	ENSCJAG00000002732	TNRC6B	95	94.553	Callithrix_jacchus
ENSPVAG00000004975	TNRC6B	92	96.829	ENSCAFG00000001255	TNRC6B	93	96.552	Canis_familiaris
ENSPVAG00000004975	TNRC6B	93	96.522	ENSCAFG00020002189	TNRC6B	92	97.051	Canis_lupus_dingo
ENSPVAG00000004975	TNRC6B	93	94.737	ENSCHIG00000003491	TNRC6B	93	95.489	Capra_hircus
ENSPVAG00000004975	TNRC6B	92	96.041	ENSTSYG00000011836	TNRC6B	94	96.179	Carlito_syrichta
ENSPVAG00000004975	TNRC6B	94	95.488	ENSCPOG00000005705	TNRC6B	93	95.488	Cavia_porcellus
ENSPVAG00000004975	TNRC6B	92	96.041	ENSCCAG00000019912	TNRC6B	93	96.041	Cebus_capucinus
ENSPVAG00000004975	TNRC6B	91	95.213	ENSCATG00000029291	TNRC6B	92	95.576	Cercocebus_atys
ENSPVAG00000004975	TNRC6B	94	96.581	ENSCLAG00000016942	TNRC6B	93	96.581	Chinchilla_lanigera
ENSPVAG00000004975	TNRC6B	91	95.084	ENSCSAG00000006021	TNRC6B	92	95.084	Chlorocebus_sabaeus
ENSPVAG00000004975	TNRC6B	85	88.933	ENSCPBG00000022932	TNRC6B	94	88.933	Chrysemys_picta_bellii
ENSPVAG00000004975	TNRC6B	91	95.343	ENSCANG00000030776	TNRC6B	93	95.238	Colobus_angolensis_palliatus
ENSPVAG00000004975	TNRC6B	92	94.275	ENSCGRG00001020166	Tnrc6b	94	94.275	Cricetulus_griseus_chok1gshd
ENSPVAG00000004975	TNRC6B	94	94.275	ENSCGRG00000016696	Tnrc6b	92	94.186	Cricetulus_griseus_crigri
ENSPVAG00000004975	TNRC6B	94	94.390	ENSDNOG00000012744	TNRC6B	93	94.486	Dasypus_novemcinctus
ENSPVAG00000004975	TNRC6B	94	96.220	ENSDORG00000003386	Tnrc6b	93	96.220	Dipodomys_ordii
ENSPVAG00000004975	TNRC6B	91	92.487	ENSETEG00000006570	TNRC6B	92	92.487	Echinops_telfairi
ENSPVAG00000004975	TNRC6B	94	95.971	ENSEASG00005005306	TNRC6B	93	95.971	Equus_asinus_asinus
ENSPVAG00000004975	TNRC6B	94	97.561	ENSECAG00000009759	TNRC6B	93	97.561	Equus_caballus
ENSPVAG00000004975	TNRC6B	60	96.309	ENSEEUG00000008690	-	60	96.309	Erinaceus_europaeus
ENSPVAG00000004975	TNRC6B	94	96.585	ENSFCAG00000004791	TNRC6B	93	96.585	Felis_catus
ENSPVAG00000004975	TNRC6B	87	87.714	ENSFALG00000012195	TNRC6B	93	87.714	Ficedula_albicollis
ENSPVAG00000004975	TNRC6B	94	96.463	ENSFDAG00000021368	TNRC6B	93	96.463	Fukomys_damarensis
ENSPVAG00000004975	TNRC6B	91	87.742	ENSGALG00000012050	TNRC6B	90	87.742	Gallus_gallus
ENSPVAG00000004975	TNRC6B	91	88.258	ENSGAGG00000025188	TNRC6B	92	88.258	Gopherus_agassizii
ENSPVAG00000004975	TNRC6B	92	95.658	ENSGGOG00000008444	TNRC6B	94	95.916	Gorilla_gorilla
ENSPVAG00000004975	TNRC6B	94	95.976	ENSHGLG00000009306	TNRC6B	93	96.381	Heterocephalus_glaber_female
ENSPVAG00000004975	TNRC6B	94	95.976	ENSHGLG00100018108	TNRC6B	93	95.976	Heterocephalus_glaber_male
ENSPVAG00000004975	TNRC6B	58	53.467	ENSIPUG00000001515	tnrc6b	64	54.457	Ictalurus_punctatus
ENSPVAG00000004975	TNRC6B	94	96.341	ENSSTOG00000008927	TNRC6B	93	96.341	Ictidomys_tridecemlineatus
ENSPVAG00000004975	TNRC6B	94	94.512	ENSJJAG00000015779	Tnrc6b	93	94.512	Jaculus_jaculus
ENSPVAG00000004975	TNRC6B	89	68.813	ENSLACG00000000628	-	86	68.662	Latimeria_chalumnae
ENSPVAG00000004975	TNRC6B	69	96.615	ENSLAFG00000014473	TNRC6B	91	96.615	Loxodonta_africana
ENSPVAG00000004975	TNRC6B	91	95.343	ENSMFAG00000003862	TNRC6B	92	95.710	Macaca_fascicularis
ENSPVAG00000004975	TNRC6B	94	95.610	ENSMMUG00000021345	TNRC6B	94	95.658	Macaca_mulatta
ENSPVAG00000004975	TNRC6B	90	95.455	ENSMNEG00000042745	TNRC6B	92	95.244	Macaca_nemestrina
ENSPVAG00000004975	TNRC6B	91	95.343	ENSMLEG00000041780	TNRC6B	94	95.658	Mandrillus_leucophaeus
ENSPVAG00000004975	TNRC6B	92	88.010	ENSMGAG00000012333	TNRC6B	93	87.871	Meleagris_gallopavo
ENSPVAG00000004975	TNRC6B	94	92.083	ENSMAUG00000016123	Tnrc6b	90	94.186	Mesocricetus_auratus
ENSPVAG00000004975	TNRC6B	92	95.785	ENSMICG00000014056	TNRC6B	96	95.084	Microcebus_murinus
ENSPVAG00000004975	TNRC6B	94	94.268	ENSMOCG00000020334	Tnrc6b	93	94.268	Microtus_ochrogaster
ENSPVAG00000004975	TNRC6B	94	94.397	MGP_CAROLIEiJ_G0020043	Tnrc6b	93	94.397	Mus_caroli
ENSPVAG00000004975	TNRC6B	94	94.032	ENSMUSG00000047888	Tnrc6b	93	94.032	Mus_musculus
ENSPVAG00000004975	TNRC6B	94	93.780	MGP_PahariEiJ_G0020045	Tnrc6b	93	93.780	Mus_pahari
ENSPVAG00000004975	TNRC6B	94	94.397	MGP_SPRETEiJ_G0020941	Tnrc6b	93	94.397	Mus_spretus
ENSPVAG00000004975	TNRC6B	91	96.244	ENSMPUG00000016442	TNRC6B	93	96.244	Mustela_putorius_furo
ENSPVAG00000004975	TNRC6B	92	95.913	ENSMLUG00000008765	TNRC6B	93	95.913	Myotis_lucifugus
ENSPVAG00000004975	TNRC6B	94	94.750	ENSNGAG00000021294	Tnrc6b	93	94.750	Nannospalax_galili
ENSPVAG00000004975	TNRC6B	79	94.364	ENSNLEG00000015311	TNRC6B	94	96.179	Nomascus_leucogenys
ENSPVAG00000004975	TNRC6B	84	92.857	ENSOPRG00000012054	TNRC6B	80	92.857	Ochotona_princeps
ENSPVAG00000004975	TNRC6B	94	96.463	ENSODEG00000013146	TNRC6B	93	96.463	Octodon_degus
ENSPVAG00000004975	TNRC6B	89	46.811	ENSONIG00000019679	-	81	49.354	Oreochromis_niloticus
ENSPVAG00000004975	TNRC6B	94	93.902	ENSOCUG00000016128	TNRC6B	93	93.902	Oryctolagus_cuniculus
ENSPVAG00000004975	TNRC6B	92	94.898	ENSOGAG00000011096	TNRC6B	93	94.898	Otolemur_garnettii
ENSPVAG00000004975	TNRC6B	94	95.018	ENSOARG00000017238	TNRC6B	93	95.018	Ovis_aries
ENSPVAG00000004975	TNRC6B	92	95.658	ENSPPAG00000028514	TNRC6B	94	96.047	Pan_paniscus
ENSPVAG00000004975	TNRC6B	92	96.296	ENSPPRG00000017741	TNRC6B	94	96.706	Panthera_pardus
ENSPVAG00000004975	TNRC6B	91	93.798	ENSPTIG00000022064	TNRC6B	91	96.519	Panthera_tigris_altaica
ENSPVAG00000004975	TNRC6B	92	95.530	ENSPTRG00000047826	TNRC6B	94	95.916	Pan_troglodytes
ENSPVAG00000004975	TNRC6B	90	95.321	ENSPANG00000009271	TNRC6B	95	95.726	Papio_anubis
ENSPVAG00000004975	TNRC6B	91	88.516	ENSPSIG00000005318	TNRC6B	92	88.516	Pelodiscus_sinensis
ENSPVAG00000004975	TNRC6B	94	94.519	ENSPEMG00000011403	Tnrc6b	93	94.519	Peromyscus_maniculatus_bairdii
ENSPVAG00000004975	TNRC6B	90	84.223	ENSPCIG00000020347	TNRC6B	92	82.740	Phascolarctos_cinereus
ENSPVAG00000004975	TNRC6B	83	42.721	ENSPFOG00000006033	-	81	44.591	Poecilia_formosa
ENSPVAG00000004975	TNRC6B	58	47.153	ENSPLAG00000001418	-	67	50.349	Poecilia_latipinna
ENSPVAG00000004975	TNRC6B	92	95.785	ENSPPYG00000011849	TNRC6B	92	95.785	Pongo_abelii
ENSPVAG00000004975	TNRC6B	77	91.912	ENSPCAG00000008739	TNRC6B	75	91.111	Procavia_capensis
ENSPVAG00000004975	TNRC6B	92	95.913	ENSPCOG00000020790	TNRC6B	94	96.189	Propithecus_coquereli
ENSPVAG00000004975	TNRC6B	58	52.893	ENSPNAG00000011713	tnrc6b	55	51.579	Pygocentrus_nattereri
ENSPVAG00000004975	TNRC6B	94	93.537	ENSRNOG00000024907	Tnrc6b	93	93.537	Rattus_norvegicus
ENSPVAG00000004975	TNRC6B	91	95.213	ENSRBIG00000035576	TNRC6B	93	95.370	Rhinopithecus_bieti
ENSPVAG00000004975	TNRC6B	91	95.213	ENSRROG00000031135	TNRC6B	93	95.238	Rhinopithecus_roxellana
ENSPVAG00000004975	TNRC6B	90	95.910	ENSSBOG00000029743	TNRC6B	91	95.910	Saimiri_boliviensis_boliviensis
ENSPVAG00000004975	TNRC6B	91	83.484	ENSSHAG00000009692	TNRC6B	92	83.484	Sarcophilus_harrisii
ENSPVAG00000004975	TNRC6B	61	85.593	ENSSARG00000007971	-	62	85.593	Sorex_araneus
ENSPVAG00000004975	TNRC6B	83	86.054	ENSSPUG00000010801	TNRC6B	92	86.054	Sphenodon_punctatus
ENSPVAG00000004975	TNRC6B	94	96.341	ENSSSCG00000000078	TNRC6B	93	96.341	Sus_scrofa
ENSPVAG00000004975	TNRC6B	85	90.358	ENSTGUG00000010138	-	92	90.083	Taeniopygia_guttata
ENSPVAG00000004975	TNRC6B	94	95.976	ENSTTRG00000011465	TNRC6B	92	95.976	Tursiops_truncatus
ENSPVAG00000004975	TNRC6B	94	95.926	ENSUAMG00000007174	TNRC6B	93	95.238	Ursus_americanus
ENSPVAG00000004975	TNRC6B	91	96.632	ENSUMAG00000014336	TNRC6B	93	96.632	Ursus_maritimus
ENSPVAG00000004975	TNRC6B	67	91.700	ENSVPAG00000001467	TNRC6B	73	90.486	Vicugna_pacos
ENSPVAG00000004975	TNRC6B	94	96.707	ENSVVUG00000007064	TNRC6B	93	96.707	Vulpes_vulpes
ENSPVAG00000004975	TNRC6B	51	50.206	ENSXCOG00000003042	-	71	50.551	Xiphophorus_couchianus