EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000005207 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 106176 bases
Position: chrGeneScaffold_2561:299031-405206
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000004928	PUF	PF00806.19	3.9e-66	1	7
ENSPVAP00000004928	PUF	PF00806.19	3.9e-66	2	7
ENSPVAP00000004928	PUF	PF00806.19	3.9e-66	3	7
ENSPVAP00000004928	PUF	PF00806.19	3.9e-66	4	7
ENSPVAP00000004928	PUF	PF00806.19	3.9e-66	5	7
ENSPVAP00000004928	PUF	PF00806.19	3.9e-66	6	7
ENSPVAP00000004928	PUF	PF00806.19	3.9e-66	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000005207	PUM1-201	3669	-	ENSPVAP00000004928	1222 (aa)	-	UPI00018B3EAB

Gene Model

Click here to download ENSPVAG00000005207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000005207's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000005207	PUM1	85	68.839	ENSPVAG00000002920	PUM2	100	68.933

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000005207	PUM1	99	96.396	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSPVAG00000005207	PUM1	87	85.783	ENSAPOG00000021632	pum1	100	85.301	Acanthochromis_polyacanthus
ENSPVAG00000005207	PUM1	99	95.993	ENSAMEG00000017656	PUM1	99	95.993	Ailuropoda_melanoleuca
ENSPVAG00000005207	PUM1	97	72.879	ENSACIG00000021013	pum1	100	74.731	Amphilophus_citrinellus
ENSPVAG00000005207	PUM1	87	85.783	ENSAOCG00000003944	pum1	100	85.301	Amphiprion_ocellaris
ENSPVAG00000005207	PUM1	87	85.783	ENSAPEG00000014550	pum1	100	85.301	Amphiprion_percula
ENSPVAG00000005207	PUM1	87	85.783	ENSATEG00000016004	pum1	100	85.301	Anabas_testudineus
ENSPVAG00000005207	PUM1	97	95.374	ENSAPLG00000009351	PUM1	100	95.374	Anas_platyrhynchos
ENSPVAG00000005207	PUM1	97	93.619	ENSACAG00000000682	PUM1	98	93.619	Anolis_carolinensis
ENSPVAG00000005207	PUM1	97	96.972	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSPVAG00000005207	PUM1	87	74.675	ENSACLG00000019354	pum1	100	76.944	Astatotilapia_calliptera
ENSPVAG00000005207	PUM1	97	76.711	ENSAMXG00000020607	pum1	97	77.129	Astyanax_mexicanus
ENSPVAG00000005207	PUM1	97	97.222	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSPVAG00000005207	PUM1	97	97.140	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSPVAG00000005207	PUM1	97	94.954	ENSCAFG00000011205	PUM1	100	94.954	Canis_familiaris
ENSPVAG00000005207	PUM1	89	94.904	ENSCAFG00020024616	PUM1	99	96.205	Canis_lupus_dingo
ENSPVAG00000005207	PUM1	97	97.222	ENSCHIG00000012952	PUM1	100	97.222	Capra_hircus
ENSPVAG00000005207	PUM1	97	97.056	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSPVAG00000005207	PUM1	97	96.888	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSPVAG00000005207	PUM1	97	95.202	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSPVAG00000005207	PUM1	97	96.972	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSPVAG00000005207	PUM1	97	96.500	ENSCSAG00000001028	PUM1	100	96.500	Chlorocebus_sabaeus
ENSPVAG00000005207	PUM1	91	96.132	ENSCHOG00000010245	PUM1	93	96.132	Choloepus_hoffmanni
ENSPVAG00000005207	PUM1	97	95.550	ENSCPBG00000009288	PUM1	100	96.528	Chrysemys_picta_bellii
ENSPVAG00000005207	PUM1	99	96.314	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSPVAG00000005207	PUM1	97	96.465	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSPVAG00000005207	PUM1	97	96.465	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSPVAG00000005207	PUM1	87	73.957	ENSCSEG00000015981	pum1	100	75.648	Cynoglossus_semilaevis
ENSPVAG00000005207	PUM1	97	72.080	ENSCVAG00000007043	pum1	100	73.945	Cyprinodon_variegatus
ENSPVAG00000005207	PUM1	97	77.258	ENSDARG00000099256	pum1	100	78.453	Danio_rerio
ENSPVAG00000005207	PUM1	97	96.972	ENSDNOG00000010939	PUM1	100	96.972	Dasypus_novemcinctus
ENSPVAG00000005207	PUM1	82	93.489	ENSDORG00000001875	Pum1	100	93.543	Dipodomys_ordii
ENSPVAG00000005207	PUM1	84	93.555	ENSETEG00000004355	PUM1	87	93.555	Echinops_telfairi
ENSPVAG00000005207	PUM1	97	97.054	ENSEASG00005010813	PUM1	100	97.054	Equus_asinus_asinus
ENSPVAG00000005207	PUM1	97	96.888	ENSECAG00000021369	PUM1	100	96.888	Equus_caballus
ENSPVAG00000005207	PUM1	74	100.000	ENSEEUG00000003871	PUM1	75	100.000	Erinaceus_europaeus
ENSPVAG00000005207	PUM1	97	74.382	ENSELUG00000002409	pum1	100	80.817	Esox_lucius
ENSPVAG00000005207	PUM1	97	97.393	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSPVAG00000005207	PUM1	97	92.899	ENSFALG00000001214	PUM1	97	92.899	Ficedula_albicollis
ENSPVAG00000005207	PUM1	97	96.888	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSPVAG00000005207	PUM1	97	95.627	ENSGALG00000042598	PUM1	100	95.627	Gallus_gallus
ENSPVAG00000005207	PUM1	87	82.299	ENSGAFG00000015617	pum1	100	84.578	Gambusia_affinis
ENSPVAG00000005207	PUM1	97	73.080	ENSGACG00000005717	pum1	100	74.608	Gasterosteus_aculeatus
ENSPVAG00000005207	PUM1	97	95.206	ENSGAGG00000001290	PUM1	100	95.206	Gopherus_agassizii
ENSPVAG00000005207	PUM1	97	97.481	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSPVAG00000005207	PUM1	97	72.577	ENSHBUG00000018718	pum1	100	74.524	Haplochromis_burtoni
ENSPVAG00000005207	PUM1	97	96.720	ENSHGLG00000013819	Pum1	100	98.611	Heterocephalus_glaber_female
ENSPVAG00000005207	PUM1	97	96.720	ENSHGLG00100008621	Pum1	100	98.611	Heterocephalus_glaber_male
ENSPVAG00000005207	PUM1	87	73.123	ENSHCOG00000005149	pum1	100	73.241	Hippocampus_comes
ENSPVAG00000005207	PUM1	97	75.208	ENSIPUG00000020421	pum1	100	76.060	Ictalurus_punctatus
ENSPVAG00000005207	PUM1	97	97.222	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSPVAG00000005207	PUM1	97	96.801	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSPVAG00000005207	PUM1	97	72.245	ENSKMAG00000003481	pum1	100	74.111	Kryptolebias_marmoratus
ENSPVAG00000005207	PUM1	97	71.867	ENSLBEG00000002527	pum1	100	74.068	Labrus_bergylta
ENSPVAG00000005207	PUM1	97	84.635	ENSLACG00000017188	PUM1	99	84.801	Latimeria_chalumnae
ENSPVAG00000005207	PUM1	97	85.917	ENSLOCG00000005210	pum1	100	85.928	Lepisosteus_oculatus
ENSPVAG00000005207	PUM1	97	96.720	ENSLAFG00000003178	PUM1	100	96.720	Loxodonta_africana
ENSPVAG00000005207	PUM1	97	97.470	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSPVAG00000005207	PUM1	97	97.066	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSPVAG00000005207	PUM1	97	97.475	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSPVAG00000005207	PUM1	99	96.478	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSPVAG00000005207	PUM1	97	72.659	ENSMAMG00000011606	pum1	100	74.607	Mastacembelus_armatus
ENSPVAG00000005207	PUM1	97	72.577	ENSMZEG00005005834	pum1	100	74.524	Maylandia_zebra
ENSPVAG00000005207	PUM1	97	95.122	ENSMGAG00000000724	PUM1	100	95.122	Meleagris_gallopavo
ENSPVAG00000005207	PUM1	97	96.636	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSPVAG00000005207	PUM1	97	94.710	ENSMICG00000012213	-	100	94.199	Microcebus_murinus
ENSPVAG00000005207	PUM1	97	97.056	ENSMICG00000007713	-	100	99.306	Microcebus_murinus
ENSPVAG00000005207	PUM1	97	96.552	ENSMOCG00000015463	Pum1	100	98.611	Microtus_ochrogaster
ENSPVAG00000005207	PUM1	87	82.759	ENSMMOG00000019817	pum1	100	85.060	Mola_mola
ENSPVAG00000005207	PUM1	97	95.546	ENSMODG00000017067	PUM1	100	95.630	Monodelphis_domestica
ENSPVAG00000005207	PUM1	87	82.989	ENSMALG00000016399	pum1	100	85.301	Monopterus_albus
ENSPVAG00000005207	PUM1	97	96.380	MGP_CAROLIEiJ_G0026549	Pum1	100	98.611	Mus_caroli
ENSPVAG00000005207	PUM1	97	96.633	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSPVAG00000005207	PUM1	97	96.465	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSPVAG00000005207	PUM1	97	96.549	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSPVAG00000005207	PUM1	97	96.970	ENSMPUG00000015454	PUM1	100	96.970	Mustela_putorius_furo
ENSPVAG00000005207	PUM1	97	96.972	ENSMLUG00000006490	PUM1	100	96.972	Myotis_lucifugus
ENSPVAG00000005207	PUM1	97	96.970	ENSNGAG00000002378	Pum1	100	98.611	Nannospalax_galili
ENSPVAG00000005207	PUM1	77	78.589	ENSNBRG00000010689	pum1	100	80.741	Neolamprologus_brichardi
ENSPVAG00000005207	PUM1	99	95.086	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSPVAG00000005207	PUM1	77	100.000	ENSMEUG00000000976	-	78	97.297	Notamacropus_eugenii
ENSPVAG00000005207	PUM1	82	99.010	ENSOPRG00000001776	PUM1	73	99.010	Ochotona_princeps
ENSPVAG00000005207	PUM1	97	96.886	ENSODEG00000003465	PUM1	100	98.611	Octodon_degus
ENSPVAG00000005207	PUM1	97	73.159	ENSONIG00000002290	pum1	100	74.855	Oreochromis_niloticus
ENSPVAG00000005207	PUM1	79	77.538	ENSOANG00000004902	-	99	77.538	Ornithorhynchus_anatinus
ENSPVAG00000005207	PUM1	97	96.468	ENSOCUG00000008641	PUM1	99	96.468	Oryctolagus_cuniculus
ENSPVAG00000005207	PUM1	97	73.080	ENSORLG00000011482	pum1	100	74.279	Oryzias_latipes
ENSPVAG00000005207	PUM1	97	73.163	ENSORLG00020019461	pum1	100	74.279	Oryzias_latipes_hni
ENSPVAG00000005207	PUM1	97	73.163	ENSORLG00015011375	pum1	100	74.361	Oryzias_latipes_hsok
ENSPVAG00000005207	PUM1	87	86.988	ENSOMEG00000009312	pum1	100	84.578	Oryzias_melastigma
ENSPVAG00000005207	PUM1	97	94.374	ENSOGAG00000011063	PUM1	100	94.374	Otolemur_garnettii
ENSPVAG00000005207	PUM1	97	96.384	ENSOARG00000001899	PUM1	100	96.384	Ovis_aries
ENSPVAG00000005207	PUM1	97	97.481	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSPVAG00000005207	PUM1	99	96.478	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSPVAG00000005207	PUM1	99	96.314	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSPVAG00000005207	PUM1	97	97.481	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSPVAG00000005207	PUM1	97	97.475	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSPVAG00000005207	PUM1	97	76.738	ENSPKIG00000010578	pum1	100	76.403	Paramormyrops_kingsleyae
ENSPVAG00000005207	PUM1	97	95.791	ENSPSIG00000014118	PUM1	100	95.791	Pelodiscus_sinensis
ENSPVAG00000005207	PUM1	77	76.961	ENSPMGG00000005836	pum1	100	79.218	Periophthalmus_magnuspinnatus
ENSPVAG00000005207	PUM1	97	96.720	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSPVAG00000005207	PUM1	97	95.630	ENSPCIG00000014151	PUM1	100	96.680	Phascolarctos_cinereus
ENSPVAG00000005207	PUM1	92	75.372	ENSPFOG00000007289	pum1	99	79.052	Poecilia_formosa
ENSPVAG00000005207	PUM1	97	71.578	ENSPLAG00000007256	pum1	100	75.934	Poecilia_latipinna
ENSPVAG00000005207	PUM1	87	75.369	ENSPMEG00000019543	pum1	99	76.335	Poecilia_mexicana
ENSPVAG00000005207	PUM1	97	72.659	ENSPREG00000005195	pum1	100	78.303	Poecilia_reticulata
ENSPVAG00000005207	PUM1	97	95.545	ENSPPYG00000001621	PUM1	100	95.545	Pongo_abelii
ENSPVAG00000005207	PUM1	77	98.242	ENSPCAG00000001979	PUM1	76	98.242	Procavia_capensis
ENSPVAG00000005207	PUM1	97	97.056	ENSPCOG00000004398	PUM1	100	99.306	Propithecus_coquereli
ENSPVAG00000005207	PUM1	97	72.659	ENSPNYG00000009518	pum1	100	75.663	Pundamilia_nyererei
ENSPVAG00000005207	PUM1	97	77.090	ENSPNAG00000026728	pum1	100	77.975	Pygocentrus_nattereri
ENSPVAG00000005207	PUM1	97	96.465	ENSRNOG00000011709	Pum1	100	96.465	Rattus_norvegicus
ENSPVAG00000005207	PUM1	100	95.503	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSPVAG00000005207	PUM1	100	95.503	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSPVAG00000005207	PUM1	97	97.225	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSPVAG00000005207	PUM1	97	95.462	ENSSHAG00000010918	PUM1	100	95.546	Sarcophilus_harrisii
ENSPVAG00000005207	PUM1	87	82.989	ENSSMAG00000010918	pum1	100	85.301	Scophthalmus_maximus
ENSPVAG00000005207	PUM1	97	72.659	ENSSDUG00000009021	pum1	100	74.855	Seriola_dumerili
ENSPVAG00000005207	PUM1	93	73.805	ENSSLDG00000009667	pum1	100	76.452	Seriola_lalandi_dorsalis
ENSPVAG00000005207	PUM1	94	95.291	ENSSARG00000003055	PUM1	94	95.291	Sorex_araneus
ENSPVAG00000005207	PUM1	97	95.118	ENSSPUG00000006267	PUM1	100	95.118	Sphenodon_punctatus
ENSPVAG00000005207	PUM1	87	85.783	ENSSPAG00000016636	pum1	100	85.301	Stegastes_partitus
ENSPVAG00000005207	PUM1	97	97.477	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSPVAG00000005207	PUM1	97	72.471	ENSTRUG00000013121	pum1	100	80.370	Takifugu_rubripes
ENSPVAG00000005207	PUM1	97	72.841	ENSTNIG00000016983	pum1	99	74.876	Tetraodon_nigroviridis
ENSPVAG00000005207	PUM1	83	94.241	ENSTBEG00000013810	PUM1	87	94.241	Tupaia_belangeri
ENSPVAG00000005207	PUM1	90	97.080	ENSTTRG00000007436	PUM1	90	97.080	Tursiops_truncatus
ENSPVAG00000005207	PUM1	93	98.893	ENSUAMG00000018262	-	100	98.893	Ursus_americanus
ENSPVAG00000005207	PUM1	93	96.657	ENSUMAG00000009211	PUM1	100	96.266	Ursus_maritimus
ENSPVAG00000005207	PUM1	90	99.664	ENSVPAG00000005902	PUM1	92	99.664	Vicugna_pacos
ENSPVAG00000005207	PUM1	97	97.225	ENSVVUG00000014631	PUM1	100	97.225	Vulpes_vulpes
ENSPVAG00000005207	PUM1	97	85.595	ENSXETG00000012904	pum1	99	85.595	Xenopus_tropicalis
ENSPVAG00000005207	PUM1	97	71.831	ENSXMAG00000002945	pum1	100	75.726	Xiphophorus_maculatus