EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000005220 (Gene tree)
Gene ID: -
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 55491 bases
Position: chrGeneScaffold_1906:30698-86188
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000004943	RRM_1	PF00076.22	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000005224	SCAF4-201	3411	-	ENSPVAP00000004943	1136 (aa)	-	UPI00018B34C0

Gene Model

Click here to download ENSPVAG00000005220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000005220's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000005220	SCAF4	100	92.851	ENSG00000156304	SCAF4	100	92.677	Homo_sapiens
ENSPVAG00000005220	SCAF4	72	95.383	ENSAMEG00000014987	SCAF4	97	95.416	Ailuropoda_melanoleuca
ENSPVAG00000005220	SCAF4	99	75.546	ENSAPLG00000002509	SCAF4	100	74.145	Anas_platyrhynchos
ENSPVAG00000005220	SCAF4	100	64.421	ENSACAG00000002569	SCAF4	52	84.756	Anolis_carolinensis
ENSPVAG00000005220	SCAF4	100	92.247	ENSANAG00000037494	SCAF4	100	92.160	Aotus_nancymaae
ENSPVAG00000005220	SCAF4	93	50.271	ENSAMXG00000008585	scaf4a	60	62.481	Astyanax_mexicanus
ENSPVAG00000005220	SCAF4	100	93.876	ENSBTAG00000018855	SCAF4	100	93.701	Bos_taurus
ENSPVAG00000005220	SCAF4	100	92.428	ENSCJAG00000008993	SCAF4	99	93.758	Callithrix_jacchus
ENSPVAG00000005220	SCAF4	99	96.454	ENSCAFG00000008863	SCAF4	99	96.454	Canis_familiaris
ENSPVAG00000005220	SCAF4	99	93.500	ENSCAFG00020026019	SCAF4	100	96.116	Canis_lupus_dingo
ENSPVAG00000005220	SCAF4	100	93.531	ENSCHIG00000008385	SCAF4	100	93.444	Capra_hircus
ENSPVAG00000005220	SCAF4	92	93.402	ENSTSYG00000011344	SCAF4	98	93.279	Carlito_syrichta
ENSPVAG00000005220	SCAF4	100	88.425	ENSCPOG00000012443	SCAF4	100	88.338	Cavia_porcellus
ENSPVAG00000005220	SCAF4	100	93.013	ENSCCAG00000033727	SCAF4	100	93.188	Cebus_capucinus
ENSPVAG00000005220	SCAF4	100	92.188	ENSCATG00000030379	SCAF4	100	92.622	Cercocebus_atys
ENSPVAG00000005220	SCAF4	99	89.140	ENSCLAG00000006298	SCAF4	100	88.532	Chinchilla_lanigera
ENSPVAG00000005220	SCAF4	100	92.354	ENSCSAG00000009438	SCAF4	100	92.094	Chlorocebus_sabaeus
ENSPVAG00000005220	SCAF4	100	92.757	ENSCANG00000029847	SCAF4	100	93.106	Colobus_angolensis_palliatus
ENSPVAG00000005220	SCAF4	67	89.610	ENSCGRG00001020821	Scaf4	65	89.610	Cricetulus_griseus_chok1gshd
ENSPVAG00000005220	SCAF4	68	88.774	ENSCGRG00000014360	Scaf4	66	88.250	Cricetulus_griseus_crigri
ENSPVAG00000005220	SCAF4	53	55.184	ENSCSEG00000012808	-	55	68.987	Cynoglossus_semilaevis
ENSPVAG00000005220	SCAF4	79	52.559	ENSCSEG00000019549	scaf4a	53	56.555	Cynoglossus_semilaevis
ENSPVAG00000005220	SCAF4	100	90.614	ENSDNOG00000019014	SCAF4	94	90.789	Dasypus_novemcinctus
ENSPVAG00000005220	SCAF4	96	78.857	ENSETEG00000000583	SCAF4	99	79.855	Echinops_telfairi
ENSPVAG00000005220	SCAF4	100	96.140	ENSEASG00005007756	SCAF4	100	96.404	Equus_asinus_asinus
ENSPVAG00000005220	SCAF4	100	96.056	ENSECAG00000014248	SCAF4	100	95.968	Equus_caballus
ENSPVAG00000005220	SCAF4	60	51.466	ENSELUG00000002779	SCAF8	69	69.565	Esox_lucius
ENSPVAG00000005220	SCAF4	100	94.313	ENSFCAG00000002228	SCAF4	100	94.751	Felis_catus
ENSPVAG00000005220	SCAF4	99	87.727	ENSFDAG00000017780	SCAF4	100	87.727	Fukomys_damarensis
ENSPVAG00000005220	SCAF4	100	76.849	ENSGALG00000033965	SCAF4	100	75.874	Gallus_gallus
ENSPVAG00000005220	SCAF4	55	63.780	ENSGAFG00000019460	scaf4a	57	75.610	Gambusia_affinis
ENSPVAG00000005220	SCAF4	92	88.013	ENSGGOG00000015557	SCAF4	100	92.683	Gorilla_gorilla
ENSPVAG00000005220	SCAF4	100	89.506	ENSHGLG00000010582	SCAF4	100	90.199	Heterocephalus_glaber_female
ENSPVAG00000005220	SCAF4	99	89.377	ENSHGLG00100009441	SCAF4	100	90.079	Heterocephalus_glaber_male
ENSPVAG00000005220	SCAF4	99	85.601	ENSSTOG00000004450	SCAF4	100	85.954	Ictidomys_tridecemlineatus
ENSPVAG00000005220	SCAF4	99	88.703	ENSJJAG00000019447	Scaf4	99	88.772	Jaculus_jaculus
ENSPVAG00000005220	SCAF4	97	62.115	ENSLACG00000013913	SCAF4	59	68.132	Latimeria_chalumnae
ENSPVAG00000005220	SCAF4	96	58.385	ENSLOCG00000009162	scaf4a	59	67.459	Lepisosteus_oculatus
ENSPVAG00000005220	SCAF4	99	92.504	ENSLAFG00000010710	SCAF4	100	92.857	Loxodonta_africana
ENSPVAG00000005220	SCAF4	100	92.121	ENSMFAG00000037668	SCAF4	100	91.429	Macaca_fascicularis
ENSPVAG00000005220	SCAF4	100	92.035	ENSMMUG00000001712	SCAF4	100	91.342	Macaca_mulatta
ENSPVAG00000005220	SCAF4	100	91.869	ENSMNEG00000032966	SCAF4	100	91.609	Macaca_nemestrina
ENSPVAG00000005220	SCAF4	99	91.951	ENSMLEG00000039674	SCAF4	100	92.388	Mandrillus_leucophaeus
ENSPVAG00000005220	SCAF4	99	76.815	ENSMGAG00000014515	SCAF4	100	75.507	Meleagris_gallopavo
ENSPVAG00000005220	SCAF4	99	87.390	ENSMAUG00000013307	Scaf4	100	88.287	Mesocricetus_auratus
ENSPVAG00000005220	SCAF4	100	93.082	ENSMICG00000005256	SCAF4	100	93.345	Microcebus_murinus
ENSPVAG00000005220	SCAF4	98	91.645	ENSMOCG00000012087	Scaf4	95	91.395	Microtus_ochrogaster
ENSPVAG00000005220	SCAF4	100	85.526	ENSMODG00000021040	SCAF4	100	85.351	Monodelphis_domestica
ENSPVAG00000005220	SCAF4	100	81.454	MGP_CAROLIEiJ_G0020944	Scaf4	95	88.918	Mus_caroli
ENSPVAG00000005220	SCAF4	100	88.645	ENSMUSG00000022983	Scaf4	95	88.990	Mus_musculus
ENSPVAG00000005220	SCAF4	98	87.173	MGP_PahariEiJ_G0016649	Scaf4	96	86.462	Mus_pahari
ENSPVAG00000005220	SCAF4	100	81.841	MGP_SPRETEiJ_G0021850	Scaf4	96	88.760	Mus_spretus
ENSPVAG00000005220	SCAF4	100	91.674	ENSMPUG00000001078	SCAF4	100	92.108	Mustela_putorius_furo
ENSPVAG00000005220	SCAF4	99	77.955	ENSMLUG00000011472	SCAF4	79	84.256	Myotis_lucifugus
ENSPVAG00000005220	SCAF4	99	89.710	ENSNGAG00000005214	Scaf4	99	89.825	Nannospalax_galili
ENSPVAG00000005220	SCAF4	100	92.589	ENSNLEG00000003569	SCAF4	100	93.025	Nomascus_leucogenys
ENSPVAG00000005220	SCAF4	83	94.410	ENSOPRG00000007016	SCAF4	77	89.130	Ochotona_princeps
ENSPVAG00000005220	SCAF4	100	87.575	ENSODEG00000002718	SCAF4	100	87.746	Octodon_degus
ENSPVAG00000005220	SCAF4	71	59.791	ENSONIG00000004687	scaf4a	51	76.829	Oreochromis_niloticus
ENSPVAG00000005220	SCAF4	100	87.446	ENSOCUG00000008336	SCAF4	100	87.619	Oryctolagus_cuniculus
ENSPVAG00000005220	SCAF4	52	58.661	ENSORLG00000003420	scaf4b	67	59.916	Oryzias_latipes
ENSPVAG00000005220	SCAF4	99	93.300	ENSOGAG00000014653	SCAF4	94	93.552	Otolemur_garnettii
ENSPVAG00000005220	SCAF4	99	92.945	ENSOARG00000013894	SCAF4	99	92.732	Ovis_aries
ENSPVAG00000005220	SCAF4	100	92.851	ENSPPAG00000028535	SCAF4	100	92.677	Pan_paniscus
ENSPVAG00000005220	SCAF4	99	94.960	ENSPPRG00000000635	SCAF4	100	94.872	Panthera_pardus
ENSPVAG00000005220	SCAF4	99	92.205	ENSPTIG00000021578	SCAF4	99	88.358	Panthera_tigris_altaica
ENSPVAG00000005220	SCAF4	100	92.851	ENSPTRG00000013848	SCAF4	100	92.677	Pan_troglodytes
ENSPVAG00000005220	SCAF4	100	92.035	ENSPANG00000017332	SCAF4	100	92.381	Papio_anubis
ENSPVAG00000005220	SCAF4	65	63.206	ENSPKIG00000022408	scaf4a	90	66.467	Paramormyrops_kingsleyae
ENSPVAG00000005220	SCAF4	99	77.208	ENSPSIG00000014242	SCAF4	57	83.851	Pelodiscus_sinensis
ENSPVAG00000005220	SCAF4	63	87.101	ENSPCIG00000028183	SCAF4	91	83.319	Phascolarctos_cinereus
ENSPVAG00000005220	SCAF4	100	92.770	ENSPPYG00000011355	SCAF4	100	92.596	Pongo_abelii
ENSPVAG00000005220	SCAF4	100	82.765	ENSPCAG00000009998	SCAF4	100	81.452	Procavia_capensis
ENSPVAG00000005220	SCAF4	100	92.696	ENSPCOG00000018710	SCAF4	100	92.609	Propithecus_coquereli
ENSPVAG00000005220	SCAF4	76	58.890	ENSPNAG00000016892	scaf4a	60	64.671	Pygocentrus_nattereri
ENSPVAG00000005220	SCAF4	61	89.548	ENSRNOG00000002104	Scaf4	99	84.833	Rattus_norvegicus
ENSPVAG00000005220	SCAF4	99	90.476	ENSRBIG00000040007	SCAF4	99	89.571	Rhinopithecus_bieti
ENSPVAG00000005220	SCAF4	100	93.450	ENSRROG00000029488	SCAF4	100	93.450	Rhinopithecus_roxellana
ENSPVAG00000005220	SCAF4	100	84.710	ENSSHAG00000001581	SCAF4	100	84.271	Sarcophilus_harrisii
ENSPVAG00000005220	SCAF4	87	48.760	ENSSFOG00015006338	scaf4a	54	59.150	Scleropages_formosus
ENSPVAG00000005220	SCAF4	66	59.928	ENSSMAG00000003738	scaf4b	54	73.418	Scophthalmus_maximus
ENSPVAG00000005220	SCAF4	80	52.537	ENSSMAG00000017901	scaf4a	53	53.926	Scophthalmus_maximus
ENSPVAG00000005220	SCAF4	57	62.230	ENSSDUG00000012380	scaf4b	54	72.152	Seriola_dumerili
ENSPVAG00000005220	SCAF4	100	89.062	ENSSARG00000009994	SCAF4	100	89.236	Sorex_araneus
ENSPVAG00000005220	SCAF4	100	91.098	ENSSSCG00000021023	SCAF4	100	91.011	Sus_scrofa
ENSPVAG00000005220	SCAF4	75	72.619	ENSTGUG00000013464	SCAF4	95	76.567	Taeniopygia_guttata
ENSPVAG00000005220	SCAF4	50	59.926	ENSTRUG00000009536	-	65	58.525	Takifugu_rubripes
ENSPVAG00000005220	SCAF4	99	93.794	ENSTTRG00000010963	SCAF4	100	93.794	Tursiops_truncatus
ENSPVAG00000005220	SCAF4	100	94.019	ENSUAMG00000008860	SCAF4	100	94.019	Ursus_americanus
ENSPVAG00000005220	SCAF4	99	92.965	ENSUMAG00000016962	SCAF4	100	93.321	Ursus_maritimus
ENSPVAG00000005220	SCAF4	99	96.527	ENSVVUG00000002953	SCAF4	100	96.527	Vulpes_vulpes
ENSPVAG00000005220	SCAF4	99	57.383	ENSXETG00000007351	scaf4	63	62.712	Xenopus_tropicalis