EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000005234 (Gene tree)
Gene ID: -
Gene Symbol: TDRKH
Alias: TDRD2
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 5904 bases
Position: chrscaffold_20502:8171-14074
Accession: 11713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000004953	KH_1	PF00013.29	2.9e-25	1	2
ENSPVAP00000004953	KH_1	PF00013.29	2.9e-25	2	2
ENSPVAP00000004953	TUDOR	PF00567.24	6.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000005234	TDRKH-201	1686	-	ENSPVAP00000004953	561 (aa)	-	UPI00018B0FFD

Gene Model

Click here to download ENSPVAG00000005234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000005234's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000005234	TDRKH	100	86.096	ENSG00000182134	TDRKH	100	88.550	Homo_sapiens
ENSPVAG00000005234	TDRKH	100	87.057	ENSAMEG00000000421	TDRKH	100	87.766	Ailuropoda_melanoleuca
ENSPVAG00000005234	TDRKH	85	55.943	ENSACAG00000007457	TDRKH	95	55.943	Anolis_carolinensis
ENSPVAG00000005234	TDRKH	100	85.383	ENSANAG00000021663	TDRKH	100	85.383	Aotus_nancymaae
ENSPVAG00000005234	TDRKH	100	88.057	ENSBTAG00000021594	TDRKH	100	88.057	Bos_taurus
ENSPVAG00000005234	TDRKH	100	84.848	ENSCJAG00000007955	TDRKH	100	84.848	Callithrix_jacchus
ENSPVAG00000005234	TDRKH	100	87.943	ENSCAFG00000012856	TDRKH	100	87.943	Canis_familiaris
ENSPVAG00000005234	TDRKH	100	87.943	ENSCAFG00020009606	TDRKH	100	87.943	Canis_lupus_dingo
ENSPVAG00000005234	TDRKH	100	87.166	ENSCHIG00000025326	TDRKH	100	87.166	Capra_hircus
ENSPVAG00000005234	TDRKH	100	86.275	ENSTSYG00000010405	TDRKH	100	86.275	Carlito_syrichta
ENSPVAG00000005234	TDRKH	92	83.463	ENSCAPG00000007565	TDRKH	97	83.463	Cavia_aperea
ENSPVAG00000005234	TDRKH	100	85.027	ENSCPOG00000003556	TDRKH	100	85.027	Cavia_porcellus
ENSPVAG00000005234	TDRKH	100	85.205	ENSCCAG00000033931	TDRKH	100	85.205	Cebus_capucinus
ENSPVAG00000005234	TDRKH	100	85.918	ENSCATG00000041878	TDRKH	100	85.918	Cercocebus_atys
ENSPVAG00000005234	TDRKH	100	85.027	ENSCLAG00000001088	TDRKH	100	85.027	Chinchilla_lanigera
ENSPVAG00000005234	TDRKH	100	86.096	ENSCSAG00000001820	TDRKH	100	86.096	Chlorocebus_sabaeus
ENSPVAG00000005234	TDRKH	89	84.634	ENSCHOG00000000264	TDRKH	88	84.634	Choloepus_hoffmanni
ENSPVAG00000005234	TDRKH	97	61.844	ENSCPBG00000008824	TDRKH	90	62.387	Chrysemys_picta_bellii
ENSPVAG00000005234	TDRKH	100	85.383	ENSCANG00000037367	TDRKH	100	85.383	Colobus_angolensis_palliatus
ENSPVAG00000005234	TDRKH	96	60.370	ENSCGRG00001011699	-	99	60.370	Cricetulus_griseus_chok1gshd
ENSPVAG00000005234	TDRKH	99	85.045	ENSCGRG00001006583	-	99	85.045	Cricetulus_griseus_chok1gshd
ENSPVAG00000005234	TDRKH	50	61.131	ENSCGRG00001010793	-	90	61.131	Cricetulus_griseus_chok1gshd
ENSPVAG00000005234	TDRKH	50	60.777	ENSCGRG00000012138	-	90	60.777	Cricetulus_griseus_crigri
ENSPVAG00000005234	TDRKH	96	60.185	ENSCGRG00000013230	-	99	60.185	Cricetulus_griseus_crigri
ENSPVAG00000005234	TDRKH	99	85.045	ENSCGRG00000012937	-	99	85.045	Cricetulus_griseus_crigri
ENSPVAG00000005234	TDRKH	92	84.690	ENSDNOG00000035650	TDRKH	100	84.690	Dasypus_novemcinctus
ENSPVAG00000005234	TDRKH	100	86.275	ENSDORG00000015322	Tdrkh	100	86.275	Dipodomys_ordii
ENSPVAG00000005234	TDRKH	100	79.292	ENSETEG00000008020	TDRKH	100	79.292	Echinops_telfairi
ENSPVAG00000005234	TDRKH	86	35.478	ENSEBUG00000010481	TDRKH	83	35.478	Eptatretus_burgeri
ENSPVAG00000005234	TDRKH	100	88.414	ENSEASG00005005213	TDRKH	100	88.414	Equus_asinus_asinus
ENSPVAG00000005234	TDRKH	100	88.235	ENSECAG00000013096	TDRKH	100	88.235	Equus_caballus
ENSPVAG00000005234	TDRKH	72	87.143	ENSEEUG00000015952	TDRKH	72	87.143	Erinaceus_europaeus
ENSPVAG00000005234	TDRKH	100	87.922	ENSFCAG00000010980	TDRKH	100	87.922	Felis_catus
ENSPVAG00000005234	TDRKH	100	84.314	ENSFDAG00000015315	TDRKH	100	84.314	Fukomys_damarensis
ENSPVAG00000005234	TDRKH	97	54.809	ENSGALG00000031812	TDRKH	96	54.809	Gallus_gallus
ENSPVAG00000005234	TDRKH	99	61.121	ENSGAGG00000005447	TDRKH	100	61.646	Gopherus_agassizii
ENSPVAG00000005234	TDRKH	100	86.275	ENSGGOG00000025419	TDRKH	100	86.275	Gorilla_gorilla
ENSPVAG00000005234	TDRKH	100	84.014	ENSHGLG00000007478	TDRKH	100	84.014	Heterocephalus_glaber_female
ENSPVAG00000005234	TDRKH	100	84.014	ENSHGLG00100007927	TDRKH	100	84.014	Heterocephalus_glaber_male
ENSPVAG00000005234	TDRKH	100	87.344	ENSSTOG00000006506	TDRKH	100	87.344	Ictidomys_tridecemlineatus
ENSPVAG00000005234	TDRKH	100	85.435	ENSJJAG00000000323	Tdrkh	100	85.435	Jaculus_jaculus
ENSPVAG00000005234	TDRKH	71	52.683	ENSLACG00000017639	TDRKH	98	52.683	Latimeria_chalumnae
ENSPVAG00000005234	TDRKH	99	83.659	ENSLAFG00000006274	TDRKH	100	83.659	Loxodonta_africana
ENSPVAG00000005234	TDRKH	100	86.275	ENSMFAG00000041641	TDRKH	100	86.275	Macaca_fascicularis
ENSPVAG00000005234	TDRKH	98	86.025	ENSMMUG00000009096	TDRKH	98	88.095	Macaca_mulatta
ENSPVAG00000005234	TDRKH	100	86.275	ENSMNEG00000021524	TDRKH	100	86.275	Macaca_nemestrina
ENSPVAG00000005234	TDRKH	100	86.096	ENSMLEG00000033882	TDRKH	100	86.096	Mandrillus_leucophaeus
ENSPVAG00000005234	TDRKH	99	84.436	ENSMAUG00000019159	Tdrkh	100	84.436	Mesocricetus_auratus
ENSPVAG00000005234	TDRKH	100	67.914	ENSMICG00000042330	-	100	67.914	Microcebus_murinus
ENSPVAG00000005234	TDRKH	100	86.453	ENSMICG00000010682	-	100	86.453	Microcebus_murinus
ENSPVAG00000005234	TDRKH	99	60.854	ENSMOCG00000014074	-	99	60.854	Microtus_ochrogaster
ENSPVAG00000005234	TDRKH	100	76.649	ENSMOCG00000002113	-	99	76.649	Microtus_ochrogaster
ENSPVAG00000005234	TDRKH	99	78.032	ENSMODG00000018906	TDRKH	96	78.032	Monodelphis_domestica
ENSPVAG00000005234	TDRKH	99	86.607	MGP_CAROLIEiJ_G0025310	Tdrkh	100	86.607	Mus_caroli
ENSPVAG00000005234	TDRKH	99	86.964	ENSMUSG00000041912	Tdrkh	100	86.964	Mus_musculus
ENSPVAG00000005234	TDRKH	99	86.607	MGP_PahariEiJ_G0026753	Tdrkh	100	86.607	Mus_pahari
ENSPVAG00000005234	TDRKH	99	86.786	MGP_SPRETEiJ_G0026252	Tdrkh	100	86.786	Mus_spretus
ENSPVAG00000005234	TDRKH	96	88.312	ENSMPUG00000003558	TDRKH	100	87.922	Mustela_putorius_furo
ENSPVAG00000005234	TDRKH	100	86.631	ENSMLUG00000002213	TDRKH	100	86.631	Myotis_lucifugus
ENSPVAG00000005234	TDRKH	99	86.071	ENSNGAG00000017825	Tdrkh	100	86.071	Nannospalax_galili
ENSPVAG00000005234	TDRKH	100	85.918	ENSNLEG00000010284	TDRKH	100	85.918	Nomascus_leucogenys
ENSPVAG00000005234	TDRKH	88	89.610	ENSMEUG00000006144	TDRKH	89	89.610	Notamacropus_eugenii
ENSPVAG00000005234	TDRKH	81	83.333	ENSOPRG00000016049	TDRKH	81	83.333	Ochotona_princeps
ENSPVAG00000005234	TDRKH	100	83.422	ENSODEG00000001075	-	100	83.422	Octodon_degus
ENSPVAG00000005234	TDRKH	100	84.670	ENSODEG00000009532	-	100	84.670	Octodon_degus
ENSPVAG00000005234	TDRKH	60	72.340	ENSOANG00000001094	-	87	72.340	Ornithorhynchus_anatinus
ENSPVAG00000005234	TDRKH	100	73.619	ENSOCUG00000001387	TDRKH	100	73.619	Oryctolagus_cuniculus
ENSPVAG00000005234	TDRKH	99	72.500	ENSOGAG00000032601	-	99	72.500	Otolemur_garnettii
ENSPVAG00000005234	TDRKH	51	70.833	ENSOGAG00000030085	-	97	69.097	Otolemur_garnettii
ENSPVAG00000005234	TDRKH	99	78.660	ENSOGAG00000001839	-	99	78.660	Otolemur_garnettii
ENSPVAG00000005234	TDRKH	100	87.166	ENSOARG00000021052	TDRKH	100	87.166	Ovis_aries
ENSPVAG00000005234	TDRKH	100	86.453	ENSPPAG00000028994	TDRKH	100	86.453	Pan_paniscus
ENSPVAG00000005234	TDRKH	100	88.455	ENSPPRG00000001585	TDRKH	100	88.455	Panthera_pardus
ENSPVAG00000005234	TDRKH	100	88.455	ENSPTIG00000019916	TDRKH	100	88.455	Panthera_tigris_altaica
ENSPVAG00000005234	TDRKH	100	86.453	ENSPTRG00000001297	TDRKH	100	86.453	Pan_troglodytes
ENSPVAG00000005234	TDRKH	100	86.096	ENSPANG00000001986	TDRKH	100	86.096	Papio_anubis
ENSPVAG00000005234	TDRKH	93	61.610	ENSPSIG00000008541	TDRKH	100	61.610	Pelodiscus_sinensis
ENSPVAG00000005234	TDRKH	99	87.143	ENSPEMG00000011171	Tdrkh	100	87.143	Peromyscus_maniculatus_bairdii
ENSPVAG00000005234	TDRKH	99	78.421	ENSPCIG00000021201	TDRKH	99	78.421	Phascolarctos_cinereus
ENSPVAG00000005234	TDRKH	100	86.096	ENSPPYG00000000855	TDRKH	100	86.096	Pongo_abelii
ENSPVAG00000005234	TDRKH	100	83.957	ENSPCOG00000027505	TDRKH	100	83.957	Propithecus_coquereli
ENSPVAG00000005234	TDRKH	99	87.321	ENSRNOG00000020860	Tdrkh	100	87.321	Rattus_norvegicus
ENSPVAG00000005234	TDRKH	100	85.740	ENSRBIG00000044860	TDRKH	100	85.740	Rhinopithecus_bieti
ENSPVAG00000005234	TDRKH	100	85.740	ENSRROG00000036923	TDRKH	100	85.740	Rhinopithecus_roxellana
ENSPVAG00000005234	TDRKH	100	67.736	ENSSBOG00000034454	TDRKH	100	67.736	Saimiri_boliviensis_boliviensis
ENSPVAG00000005234	TDRKH	99	78.910	ENSSHAG00000015859	TDRKH	88	78.910	Sarcophilus_harrisii
ENSPVAG00000005234	TDRKH	99	75.893	ENSSARG00000008525	TDRKH	100	75.893	Sorex_araneus
ENSPVAG00000005234	TDRKH	89	61.014	ENSSPUG00000002369	TDRKH	93	61.598	Sphenodon_punctatus
ENSPVAG00000005234	TDRKH	99	86.559	ENSSSCG00000027770	TDRKH	100	86.559	Sus_scrofa
ENSPVAG00000005234	TDRKH	100	86.453	ENSTBEG00000011201	TDRKH	100	86.453	Tupaia_belangeri
ENSPVAG00000005234	TDRKH	100	80.214	ENSTTRG00000003149	TDRKH	100	80.214	Tursiops_truncatus
ENSPVAG00000005234	TDRKH	100	88.099	ENSUAMG00000019589	TDRKH	100	88.099	Ursus_americanus
ENSPVAG00000005234	TDRKH	100	88.455	ENSUMAG00000001456	TDRKH	100	88.455	Ursus_maritimus
ENSPVAG00000005234	TDRKH	100	88.057	ENSVPAG00000000666	TDRKH	100	88.057	Vicugna_pacos
ENSPVAG00000005234	TDRKH	100	88.455	ENSVVUG00000013241	TDRKH	100	88.455	Vulpes_vulpes
ENSPVAG00000005234	TDRKH	87	39.882	ENSXETG00000019909	tdrkh	87	39.686	Xenopus_tropicalis