EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000005238 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 7933 bases
Position: chrGeneScaffold_1398:2791-10723
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000004957	MBD	PF01429.19	3.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000005238	MBD4-201	1731	-	ENSPVAP00000004957	576 (aa)	-	UPI00018B18C2

Gene Model

Click here to download ENSPVAG00000005238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000005238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000005238	MBD4	99	79.620	ENSG00000129071	MBD4	99	79.913	Homo_sapiens
ENSPVAG00000005238	MBD4	100	80.969	ENSAMEG00000004562	MBD4	100	80.969	Ailuropoda_melanoleuca
ENSPVAG00000005238	MBD4	99	72.552	ENSBTAG00000021645	MBD4	100	72.552	Bos_taurus
ENSPVAG00000005238	MBD4	99	76.910	ENSCJAG00000017293	MBD4	99	76.910	Callithrix_jacchus
ENSPVAG00000005238	MBD4	99	80.139	ENSCAFG00000004867	MBD4	99	80.139	Canis_familiaris
ENSPVAG00000005238	MBD4	99	80.139	ENSCAFG00020007082	MBD4	99	80.139	Canis_lupus_dingo
ENSPVAG00000005238	MBD4	99	72.949	ENSCHIG00000009760	MBD4	100	72.949	Capra_hircus
ENSPVAG00000005238	MBD4	99	77.336	ENSCCAG00000029796	MBD4	99	77.336	Cebus_capucinus
ENSPVAG00000005238	MBD4	99	78.336	ENSCATG00000035211	MBD4	99	78.683	Cercocebus_atys
ENSPVAG00000005238	MBD4	99	71.329	ENSCLAG00000008974	MBD4	100	71.329	Chinchilla_lanigera
ENSPVAG00000005238	MBD4	99	78.336	ENSCSAG00000009037	MBD4	99	78.683	Chlorocebus_sabaeus
ENSPVAG00000005238	MBD4	86	52.124	ENSCPBG00000014704	MBD4	89	52.124	Chrysemys_picta_bellii
ENSPVAG00000005238	MBD4	99	77.990	ENSCANG00000007120	MBD4	99	78.336	Colobus_angolensis_palliatus
ENSPVAG00000005238	MBD4	99	69.352	ENSCGRG00001003507	Mbd4	100	69.177	Cricetulus_griseus_chok1gshd
ENSPVAG00000005238	MBD4	99	69.352	ENSCGRG00000010974	Mbd4	100	69.177	Cricetulus_griseus_crigri
ENSPVAG00000005238	MBD4	99	77.622	ENSDNOG00000049619	MBD4	100	77.622	Dasypus_novemcinctus
ENSPVAG00000005238	MBD4	81	64.026	ENSDORG00000000902	-	98	63.048	Dipodomys_ordii
ENSPVAG00000005238	MBD4	51	65.698	ENSEBUG00000010816	mbd4	65	65.698	Eptatretus_burgeri
ENSPVAG00000005238	MBD4	99	83.770	ENSEASG00005014800	MBD4	100	83.770	Equus_asinus_asinus
ENSPVAG00000005238	MBD4	99	83.421	ENSECAG00000022106	MBD4	100	83.421	Equus_caballus
ENSPVAG00000005238	MBD4	90	67.366	ENSEEUG00000011459	MBD4	97	67.366	Erinaceus_europaeus
ENSPVAG00000005238	MBD4	100	80.796	ENSFCAG00000000083	MBD4	100	80.796	Felis_catus
ENSPVAG00000005238	MBD4	86	51.830	ENSGAGG00000018644	MBD4	89	51.830	Gopherus_agassizii
ENSPVAG00000005238	MBD4	99	78.238	ENSGGOG00000010698	MBD4	99	78.238	Gorilla_gorilla
ENSPVAG00000005238	MBD4	99	73.519	ENSHGLG00000009034	MBD4	100	73.519	Heterocephalus_glaber_female
ENSPVAG00000005238	MBD4	99	73.693	ENSHGLG00100000135	MBD4	100	73.693	Heterocephalus_glaber_male
ENSPVAG00000005238	MBD4	99	73.077	ENSSTOG00000020663	MBD4	100	73.077	Ictidomys_tridecemlineatus
ENSPVAG00000005238	MBD4	85	40.156	ENSLBEG00000005669	MBD4	86	41.847	Labrus_bergylta
ENSPVAG00000005238	MBD4	99	77.257	ENSLAFG00000010609	MBD4	99	77.257	Loxodonta_africana
ENSPVAG00000005238	MBD4	99	77.643	ENSMFAG00000002266	MBD4	99	77.990	Macaca_fascicularis
ENSPVAG00000005238	MBD4	99	77.069	ENSMMUG00000012723	MBD4	99	77.414	Macaca_mulatta
ENSPVAG00000005238	MBD4	96	76.492	ENSMNEG00000029752	MBD4	99	76.854	Macaca_nemestrina
ENSPVAG00000005238	MBD4	99	77.816	ENSMLEG00000024859	MBD4	99	78.163	Mandrillus_leucophaeus
ENSPVAG00000005238	MBD4	99	79.029	ENSMICG00000008022	MBD4	99	79.029	Microcebus_murinus
ENSPVAG00000005238	MBD4	67	51.157	ENSMOCG00000002466	-	96	51.157	Microtus_ochrogaster
ENSPVAG00000005238	MBD4	86	60.521	ENSMODG00000006399	-	99	60.521	Monodelphis_domestica
ENSPVAG00000005238	MBD4	99	68.641	MGP_CAROLIEiJ_G0028760	Mbd4	100	68.641	Mus_caroli
ENSPVAG00000005238	MBD4	99	67.944	ENSMUSG00000030322	Mbd4	100	67.944	Mus_musculus
ENSPVAG00000005238	MBD4	99	66.667	MGP_PahariEiJ_G0022511	-	100	66.667	Mus_pahari
ENSPVAG00000005238	MBD4	99	67.247	MGP_SPRETEiJ_G0029788	Mbd4	100	67.247	Mus_spretus
ENSPVAG00000005238	MBD4	99	79.021	ENSMPUG00000017195	MBD4	99	79.021	Mustela_putorius_furo
ENSPVAG00000005238	MBD4	95	87.912	ENSMLUG00000014766	MBD4	99	87.912	Myotis_lucifugus
ENSPVAG00000005238	MBD4	99	79.376	ENSNLEG00000005337	MBD4	99	79.376	Nomascus_leucogenys
ENSPVAG00000005238	MBD4	50	100.000	ENSMEUG00000015599	-	77	100.000	Notamacropus_eugenii
ENSPVAG00000005238	MBD4	100	65.976	ENSOPRG00000000473	MBD4	100	65.976	Ochotona_princeps
ENSPVAG00000005238	MBD4	81	47.619	ENSONIG00000017212	mbd4	100	47.619	Oreochromis_niloticus
ENSPVAG00000005238	MBD4	67	48.724	ENSOANG00000004589	-	89	48.724	Ornithorhynchus_anatinus
ENSPVAG00000005238	MBD4	99	66.609	ENSOCUG00000013006	MBD4	100	66.609	Oryctolagus_cuniculus
ENSPVAG00000005238	MBD4	99	74.695	ENSOGAG00000010236	MBD4	100	74.695	Otolemur_garnettii
ENSPVAG00000005238	MBD4	99	73.124	ENSOARG00000014699	MBD4	100	73.124	Ovis_aries
ENSPVAG00000005238	MBD4	99	79.066	ENSPPAG00000036528	MBD4	99	79.066	Pan_paniscus
ENSPVAG00000005238	MBD4	100	80.069	ENSPPRG00000016480	MBD4	100	80.069	Panthera_pardus
ENSPVAG00000005238	MBD4	99	79.102	ENSPTRG00000015377	MBD4	99	79.102	Pan_troglodytes
ENSPVAG00000005238	MBD4	99	78.720	ENSPANG00000015047	MBD4	99	78.720	Papio_anubis
ENSPVAG00000005238	MBD4	94	49.303	ENSPSIG00000007892	MBD4	97	49.303	Pelodiscus_sinensis
ENSPVAG00000005238	MBD4	94	59.704	ENSPEMG00000006226	Mbd4	99	59.704	Peromyscus_maniculatus_bairdii
ENSPVAG00000005238	MBD4	89	57.685	ENSPCIG00000002276	-	98	57.685	Phascolarctos_cinereus
ENSPVAG00000005238	MBD4	87	41.602	ENSPFOG00000014471	mbd4	99	41.992	Poecilia_formosa
ENSPVAG00000005238	MBD4	99	79.376	ENSPPYG00000013417	MBD4	99	79.376	Pongo_abelii
ENSPVAG00000005238	MBD4	95	73.684	ENSPCAG00000012915	MBD4	99	73.684	Procavia_capensis
ENSPVAG00000005238	MBD4	99	67.826	ENSRNOG00000010919	Mbd4	100	67.826	Rattus_norvegicus
ENSPVAG00000005238	MBD4	99	78.336	ENSRBIG00000027722	MBD4	99	78.683	Rhinopithecus_bieti
ENSPVAG00000005238	MBD4	99	78.163	ENSRROG00000029136	MBD4	99	78.510	Rhinopithecus_roxellana
ENSPVAG00000005238	MBD4	99	76.389	ENSSBOG00000016810	MBD4	100	76.389	Saimiri_boliviensis_boliviensis
ENSPVAG00000005238	MBD4	98	54.657	ENSSHAG00000012953	MBD4	99	54.657	Sarcophilus_harrisii
ENSPVAG00000005238	MBD4	81	63.441	ENSSARG00000004496	-	80	63.441	Sorex_araneus
ENSPVAG00000005238	MBD4	86	52.930	ENSSPUG00000017344	MBD4	92	52.930	Sphenodon_punctatus
ENSPVAG00000005238	MBD4	99	78.709	ENSSSCG00000033303	MBD4	100	78.709	Sus_scrofa
ENSPVAG00000005238	MBD4	88	61.468	ENSTBEG00000003041	-	87	61.468	Tupaia_belangeri
ENSPVAG00000005238	MBD4	97	80.319	ENSTTRG00000011265	MBD4	100	80.319	Tursiops_truncatus
ENSPVAG00000005238	MBD4	87	83.200	ENSUAMG00000000814	MBD4	100	83.200	Ursus_americanus
ENSPVAG00000005238	MBD4	99	81.501	ENSUMAG00000017542	MBD4	100	81.501	Ursus_maritimus
ENSPVAG00000005238	MBD4	65	75.342	ENSVPAG00000004040	-	68	75.342	Vicugna_pacos
ENSPVAG00000005238	MBD4	99	79.443	ENSVVUG00000014222	MBD4	99	79.443	Vulpes_vulpes
ENSPVAG00000005238	MBD4	85	42.147	ENSXMAG00000021129	mbd4	98	42.545	Xiphophorus_maculatus