EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPVAG00000005270 (Gene tree)
Gene ID
-
Gene Symbol
PABPN1
Alias
OPMD|PAB2|PABP2
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Pteropus_vampyrus
Status
putative
Strand
Plus strand
Length
3842 bases
Position
chrGeneScaffold_535:133997-137838
Accession
8565
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPVAP00000004988RRM_1PF00076.224.4e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPVAT00000005270PABPN1-201918-ENSPVAP00000004988305 (aa)-UPI00018B28BC
Gene Model
Click here to download ENSPVAG00000005270's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000005270's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPVAG00000005270PABPN16549.761ENSPVAG00000002716PABPN1L5657.143
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPVAG00000005270PABPN16297.884ENSG00000258643BCL2L2-PABPN15797.884Homo_sapiens
ENSPVAG00000005270PABPN110097.059ENSG00000100836PABPN110097.753Homo_sapiens
ENSPVAG00000005270PABPN18669.202ENSAPOG00000016425pabpn18880.383Acanthochromis_polyacanthus
ENSPVAG00000005270PABPN16297.884ENSAMEG00000007048BCL2L2-PABPN110097.884Ailuropoda_melanoleuca
ENSPVAG00000005270PABPN18368.235ENSACIG00000021744pabpn19481.548Amphilophus_citrinellus
ENSPVAG00000005270PABPN18669.202ENSAOCG00000015805pabpn18880.383Amphiprion_ocellaris
ENSPVAG00000005270PABPN18669.202ENSAPEG00000009623pabpn18880.383Amphiprion_percula
ENSPVAG00000005270PABPN18669.582ENSATEG00000020531pabpn18880.861Anabas_testudineus
ENSPVAG00000005270PABPN16687.192ENSACAG00000006185-7386.408Anolis_carolinensis
ENSPVAG00000005270PABPN16697.500ENSANAG00000024513-7695.714Aotus_nancymaae
ENSPVAG00000005270PABPN18367.969ENSACLG00000016374pabpn16777.941Astatotilapia_calliptera
ENSPVAG00000005270PABPN18670.342ENSAMXG00000000452pabpn19483.333Astyanax_mexicanus
ENSPVAG00000005270PABPN110096.732ENSBTAG00000006884PABPN110096.732Bos_taurus
ENSPVAG00000005270PABPN16486.735ENSBTAG00000050594-8984.834Bos_taurus
ENSPVAG00000005270PABPN16396.335ENSBTAG00000053753-7196.335Bos_taurus
ENSPVAG00000005270PABPN15595.808ENSCJAG00000004407-8495.808Callithrix_jacchus
ENSPVAG00000005270PABPN110097.059ENSCJAG00000007960-10097.059Callithrix_jacchus
ENSPVAG00000005270PABPN17593.939ENSCAFG00000011482PABPN16996.209Canis_familiaris
ENSPVAG00000005270PABPN110097.059ENSCAFG00020007298-10097.059Canis_lupus_dingo
ENSPVAG00000005270PABPN110097.059ENSCAFG00020006651-10097.059Canis_lupus_dingo
ENSPVAG00000005270PABPN110096.732ENSCHIG00000012184PABPN110096.732Capra_hircus
ENSPVAG00000005270PABPN16297.884ENSTSYG00000033996BCL2L2-PABPN110097.753Carlito_syrichta
ENSPVAG00000005270PABPN17095.283ENSCPOG00000025574PABPN16995.261Cavia_porcellus
ENSPVAG00000005270PABPN110097.059ENSCCAG00000033954BCL2L2-PABPN110097.059Cebus_capucinus
ENSPVAG00000005270PABPN110097.059ENSCATG00000038536BCL2L2-PABPN110097.059Cercocebus_atys
ENSPVAG00000005270PABPN16777.451ENSCLAG00000012423PABPN16476.303Chinchilla_lanigera
ENSPVAG00000005270PABPN16796.078ENSCSAG00000016036PABPN16994.787Chlorocebus_sabaeus
ENSPVAG00000005270PABPN16587.065ENSCHOG00000004798BCL2L2-PABPN18985.990Choloepus_hoffmanni
ENSPVAG00000005270PABPN15591.018ENSCPBG00000026060-9491.018Chrysemys_picta_bellii
ENSPVAG00000005270PABPN16861.905ENSCING00000012468-8463.184Ciona_intestinalis
ENSPVAG00000005270PABPN15861.236ENSCSAVG00000002001-9359.880Ciona_savignyi
ENSPVAG00000005270PABPN19680.952ENSCANG00000030980-7580.861Colobus_angolensis_palliatus
ENSPVAG00000005270PABPN16297.884ENSCANG00000009750BCL2L2-PABPN110097.753Colobus_angolensis_palliatus
ENSPVAG00000005270PABPN19288.214ENSCGRG00001019696Pabpn110097.191Cricetulus_griseus_chok1gshd
ENSPVAG00000005270PABPN15897.191ENSCGRG00000011102Pabpn110097.191Cricetulus_griseus_crigri
ENSPVAG00000005270PABPN18669.202ENSCSEG00000008774pabpn18880.383Cynoglossus_semilaevis
ENSPVAG00000005270PABPN18565.517ENSCVAG00000003152pabpn18878.947Cyprinodon_variegatus
ENSPVAG00000005270PABPN17179.545ENSDARG00000045373pabpn18881.818Danio_rerio
ENSPVAG00000005270PABPN16451.515ENSDARG00000087996pabpn1l9653.801Danio_rerio
ENSPVAG00000005270PABPN110097.059ENSDNOG00000023682PABPN110097.059Dasypus_novemcinctus
ENSPVAG00000005270PABPN16796.078ENSDORG00000028966-6994.787Dipodomys_ordii
ENSPVAG00000005270PABPN16362.827FBgn0005648Pabp28561.421Drosophila_melanogaster
ENSPVAG00000005270PABPN16477.949ENSEBUG00000002322pabpn18378.351Eptatretus_burgeri
ENSPVAG00000005270PABPN110097.059ENSEASG00005011716PABPN110097.059Equus_asinus_asinus
ENSPVAG00000005270PABPN19996.711ENSECAG00000011652PABPN19996.939Equus_caballus
ENSPVAG00000005270PABPN19376.678ENSEEUG00000012973-7289.573Erinaceus_europaeus
ENSPVAG00000005270PABPN18672.243ENSELUG00000022654pabpn18683.732Esox_lucius
ENSPVAG00000005270PABPN110097.059ENSFCAG00000031922PABPN110097.059Felis_catus
ENSPVAG00000005270PABPN15896.629ENSFDAG00000018381BCL2L2-PABPN110096.629Fukomys_damarensis
ENSPVAG00000005270PABPN18666.160ENSFHEG00000007215pabpn18778.469Fundulus_heteroclitus
ENSPVAG00000005270PABPN18269.444ENSGMOG00000003922pabpn16781.726Gadus_morhua
ENSPVAG00000005270PABPN16487.755ENSGALG00000052930-6285.915Gallus_gallus
ENSPVAG00000005270PABPN18668.939ENSGAFG00000017099pabpn18880.476Gambusia_affinis
ENSPVAG00000005270PABPN18666.545ENSGACG00000002167pabpn18876.471Gasterosteus_aculeatus
ENSPVAG00000005270PABPN19275.618ENSGGOG00000039675-8176.389Gorilla_gorilla
ENSPVAG00000005270PABPN19379.720ENSGGOG00000025919-9882.432Gorilla_gorilla
ENSPVAG00000005270PABPN110097.059ENSGGOG00000022683-10097.059Gorilla_gorilla
ENSPVAG00000005270PABPN18669.582ENSHBUG00000019523pabpn18880.861Haplochromis_burtoni
ENSPVAG00000005270PABPN15576.048ENSHGLG00000009842-9376.048Heterocephalus_glaber_female
ENSPVAG00000005270PABPN19173.310ENSHGLG00000018588-7180.000Heterocephalus_glaber_female
ENSPVAG00000005270PABPN19688.328ENSHGLG00000002927-9299.320Heterocephalus_glaber_female
ENSPVAG00000005270PABPN19168.214ENSHGLG00100015565-7280.000Heterocephalus_glaber_male
ENSPVAG00000005270PABPN15897.191ENSHGLG00100006673-10097.191Heterocephalus_glaber_male
ENSPVAG00000005270PABPN15587.719ENSHGLG00100018935-9487.719Heterocephalus_glaber_male
ENSPVAG00000005270PABPN18667.176ENSHCOG00000004655pabpn18779.904Hippocampus_comes
ENSPVAG00000005270PABPN18669.962ENSIPUG00000008085PABPN18881.340Ictalurus_punctatus
ENSPVAG00000005270PABPN16579.798ENSIPUG00000000180-8680.303Ictalurus_punctatus
ENSPVAG00000005270PABPN15897.753ENSSTOG00000029847BCL2L2-PABPN110097.753Ictidomys_tridecemlineatus
ENSPVAG00000005270PABPN15897.753ENSJJAG00000023507Gm2052110097.753Jaculus_jaculus
ENSPVAG00000005270PABPN16880.000ENSKMAG00000018748pabpn18880.476Kryptolebias_marmoratus
ENSPVAG00000005270PABPN18669.582ENSLBEG00000027266pabpn18880.861Labrus_bergylta
ENSPVAG00000005270PABPN15094.118ENSLACG00000000646pabpn19080.583Latimeria_chalumnae
ENSPVAG00000005270PABPN18270.916ENSLOCG00000000796pabpn17082.234Lepisosteus_oculatus
ENSPVAG00000005270PABPN16864.762ENSLOCG00000004694pabpn1l9664.762Lepisosteus_oculatus
ENSPVAG00000005270PABPN15096.689ENSLAFG00000031227-10096.689Loxodonta_africana
ENSPVAG00000005270PABPN16297.884ENSMFAG00000032183BCL2L2-PABPN110097.753Macaca_fascicularis
ENSPVAG00000005270PABPN16297.884ENSMMUG00000014747BCL2L2-PABPN110097.260Macaca_mulatta
ENSPVAG00000005270PABPN19776.589ENSMMUG00000048382-7080.095Macaca_mulatta
ENSPVAG00000005270PABPN110097.059ENSMNEG00000045065BCL2L2-PABPN110097.059Macaca_nemestrina
ENSPVAG00000005270PABPN17482.051ENSMNEG00000035750-9990.780Macaca_nemestrina
ENSPVAG00000005270PABPN19772.542ENSMLEG00000034623-9988.652Mandrillus_leucophaeus
ENSPVAG00000005270PABPN16297.884ENSMLEG00000043862BCL2L2-PABPN110097.753Mandrillus_leucophaeus
ENSPVAG00000005270PABPN18269.721ENSMAMG00000007979pabpn16980.097Mastacembelus_armatus
ENSPVAG00000005270PABPN18269.323ENSMZEG00005011904pabpn16780.711Maylandia_zebra
ENSPVAG00000005270PABPN19288.214ENSMAUG00000007383Gm205217195.261Mesocricetus_auratus
ENSPVAG00000005270PABPN110096.732ENSMICG00000010002BCL2L2-PABPN110096.732Microcebus_murinus
ENSPVAG00000005270PABPN19287.857ENSMOCG00000018557Gm205219099.320Microtus_ochrogaster
ENSPVAG00000005270PABPN18669.962ENSMMOG00000005405pabpn18881.340Mola_mola
ENSPVAG00000005270PABPN16694.527ENSMODG00000004535-6893.269Monodelphis_domestica
ENSPVAG00000005270PABPN18269.323ENSMALG00000019612pabpn16880.097Monopterus_albus
ENSPVAG00000005270PABPN16295.767MGP_CAROLIEiJ_G0019276Gm205215795.767Mus_caroli
ENSPVAG00000005270PABPN19287.143MGP_CAROLIEiJ_G0019277Pabpn19792.453Mus_caroli
ENSPVAG00000005270PABPN19287.500ENSMUSG00000022194Pabpn110096.067Mus_musculus
ENSPVAG00000005270PABPN16296.296ENSMUSG00000092232Gm205215796.296Mus_musculus
ENSPVAG00000005270PABPN16296.296MGP_PahariEiJ_G0030294Gm205215796.296Mus_pahari
ENSPVAG00000005270PABPN19287.500MGP_PahariEiJ_G0030295Pabpn110097.619Mus_pahari
ENSPVAG00000005270PABPN19287.500MGP_SPRETEiJ_G0020166Pabpn110096.067Mus_spretus
ENSPVAG00000005270PABPN16296.296MGP_SPRETEiJ_G0020165Gm205215796.296Mus_spretus
ENSPVAG00000005270PABPN15497.590ENSMPUG00000006775-9997.590Mustela_putorius_furo
ENSPVAG00000005270PABPN19286.268ENSMLUG00000012452-7089.202Myotis_lucifugus
ENSPVAG00000005270PABPN19576.471ENSMLUG00000028677-7890.047Myotis_lucifugus
ENSPVAG00000005270PABPN16295.767ENSMLUG00000003800-10095.767Myotis_lucifugus
ENSPVAG00000005270PABPN16297.884ENSNGAG00000019529Gm205215797.884Nannospalax_galili
ENSPVAG00000005270PABPN18269.323ENSNBRG00000023955pabpn19481.548Neolamprologus_brichardi
ENSPVAG00000005270PABPN19774.411ENSNLEG00000030598-7978.673Nomascus_leucogenys
ENSPVAG00000005270PABPN16797.549ENSNLEG00000015007-7596.209Nomascus_leucogenys
ENSPVAG00000005270PABPN17095.283ENSODEG00000002083BCL2L2-PABPN16995.261Octodon_degus
ENSPVAG00000005270PABPN15884.831ENSODEG00000011555-8984.431Octodon_degus
ENSPVAG00000005270PABPN19276.429ENSODEG00000003739-7183.412Octodon_degus
ENSPVAG00000005270PABPN18269.323ENSONIG00000008112pabpn16780.711Oreochromis_niloticus
ENSPVAG00000005270PABPN16796.078ENSOCUG00000016174PABPN17794.787Oryctolagus_cuniculus
ENSPVAG00000005270PABPN16878.641ENSORLG00000027900pabpn18378.641Oryzias_latipes
ENSPVAG00000005270PABPN16183.422ENSORLG00020004681pabpn16880.583Oryzias_latipes_hni
ENSPVAG00000005270PABPN16880.861ENSORLG00015000018pabpn18881.340Oryzias_latipes_hsok
ENSPVAG00000005270PABPN16878.261ENSOMEG00000016618pabpn17378.261Oryzias_melastigma
ENSPVAG00000005270PABPN110097.059ENSOGAG00000008710PABPN110097.059Otolemur_garnettii
ENSPVAG00000005270PABPN16297.884ENSOARG00000019336BCL2L2-PABPN15297.884Ovis_aries
ENSPVAG00000005270PABPN15580.838ENSPPAG00000039421-9380.838Pan_paniscus
ENSPVAG00000005270PABPN16297.884ENSPPAG00000028984BCL2L2-PABPN19997.590Pan_paniscus
ENSPVAG00000005270PABPN110097.059ENSPPRG00000010567PABPN110097.059Panthera_pardus
ENSPVAG00000005270PABPN15897.753ENSPTIG00000001063BCL2L2-PABPN110097.753Panthera_tigris_altaica
ENSPVAG00000005270PABPN19270.463ENSPTRG00000047273-7280.412Pan_troglodytes
ENSPVAG00000005270PABPN110097.059ENSPTRG00000006167BCL2L210097.059Pan_troglodytes
ENSPVAG00000005270PABPN110097.059ENSPANG00000021100BCL2L2-PABPN110097.059Papio_anubis
ENSPVAG00000005270PABPN19776.610ENSPANG00000023326-9991.489Papio_anubis
ENSPVAG00000005270PABPN16284.737ENSPKIG00000008144-6881.068Paramormyrops_kingsleyae
ENSPVAG00000005270PABPN16582.828ENSPKIG00000018052pabpn18880.383Paramormyrops_kingsleyae
ENSPVAG00000005270PABPN15468.235ENSPKIG00000008340pabpn1l9262.437Paramormyrops_kingsleyae
ENSPVAG00000005270PABPN18268.526ENSPMGG00000022027pabpn17080.203Periophthalmus_magnuspinnatus
ENSPVAG00000005270PABPN19288.214ENSPEMG00000008332Gm205219693.082Peromyscus_maniculatus_bairdii
ENSPVAG00000005270PABPN16795.098ENSPCIG00000027751-6993.839Phascolarctos_cinereus
ENSPVAG00000005270PABPN17966.667ENSPFOG00000010351pabpn18779.048Poecilia_formosa
ENSPVAG00000005270PABPN18268.254ENSPLAG00000022696pabpn16979.227Poecilia_latipinna
ENSPVAG00000005270PABPN16876.667ENSPMEG00000020856pabpn18879.048Poecilia_mexicana
ENSPVAG00000005270PABPN18666.667ENSPREG00000011278pabpn18879.524Poecilia_reticulata
ENSPVAG00000005270PABPN18694.656ENSPPYG00000005663PABPN17195.980Pongo_abelii
ENSPVAG00000005270PABPN16381.347ENSPCAG00000005902PABPN16880.500Procavia_capensis
ENSPVAG00000005270PABPN110096.732ENSPCOG00000028047BCL2L2-PABPN110096.732Propithecus_coquereli
ENSPVAG00000005270PABPN18669.582ENSPNYG00000013182pabpn18880.861Pundamilia_nyererei
ENSPVAG00000005270PABPN18670.722ENSPNAG00000023526pabpn18882.297Pygocentrus_nattereri
ENSPVAG00000005270PABPN16562.000ENSPNAG00000021666pabpn1l9463.235Pygocentrus_nattereri
ENSPVAG00000005270PABPN19287.857ENSRNOG00000042195Pabpn17094.787Rattus_norvegicus
ENSPVAG00000005270PABPN16984.360ENSRBIG00000042811-8884.360Rhinopithecus_bieti
ENSPVAG00000005270PABPN15897.740ENSRBIG00000040762BCL2L2-PABPN15597.740Rhinopithecus_bieti
ENSPVAG00000005270PABPN19779.599ENSRBIG00000039547-7681.818Rhinopithecus_bieti
ENSPVAG00000005270PABPN16979.147ENSRROG00000036409-6579.147Rhinopithecus_roxellana
ENSPVAG00000005270PABPN19979.605ENSRROG00000040409-7682.297Rhinopithecus_roxellana
ENSPVAG00000005270PABPN15897.753ENSRROG00000045535BCL2L2-PABPN110097.753Rhinopithecus_roxellana
ENSPVAG00000005270PABPN16291.584ENSSBOG00000026930BCL2L2-PABPN19997.590Saimiri_boliviensis_boliviensis
ENSPVAG00000005270PABPN18764.015ENSSHAG00000007707-8972.038Sarcophilus_harrisii
ENSPVAG00000005270PABPN16295.238ENSSHAG00000014841-8795.238Sarcophilus_harrisii
ENSPVAG00000005270PABPN16363.542ENSSFOG00015015833pabpn1l8763.265Scleropages_formosus
ENSPVAG00000005270PABPN16879.904ENSSFOG00015012565pabpn19180.383Scleropages_formosus
ENSPVAG00000005270PABPN18668.821ENSSFOG00015014718pabpn18879.904Scleropages_formosus
ENSPVAG00000005270PABPN18669.582ENSSMAG00000020157pabpn18880.861Scophthalmus_maximus
ENSPVAG00000005270PABPN18269.323ENSSDUG00000020582pabpn16880.097Seriola_dumerili
ENSPVAG00000005270PABPN18669.582ENSSLDG00000007118pabpn18880.861Seriola_lalandi_dorsalis
ENSPVAG00000005270PABPN15589.820ENSSPUG00000018308-9489.820Sphenodon_punctatus
ENSPVAG00000005270PABPN18669.582ENSSPAG00000021658pabpn18880.861Stegastes_partitus
ENSPVAG00000005270PABPN110097.059ENSSSCG00000002023PABPN110097.059Sus_scrofa
ENSPVAG00000005270PABPN17370.721ENSSSCG00000034805-7867.788Sus_scrofa
ENSPVAG00000005270PABPN15853.977ENSSSCG00000038472-9153.293Sus_scrofa
ENSPVAG00000005270PABPN18669.962ENSTRUG00000023664pabpn18881.340Takifugu_rubripes
ENSPVAG00000005270PABPN16878.095ENSTNIG00000005369pabpn19578.095Tetraodon_nigroviridis
ENSPVAG00000005270PABPN110096.405ENSUAMG00000024460PABPN110096.405Ursus_americanus
ENSPVAG00000005270PABPN16297.884ENSUMAG00000014288BCL2L2-PABPN15797.884Ursus_maritimus
ENSPVAG00000005270PABPN16297.884ENSVVUG00000019912BCL2L2-PABPN17497.884Vulpes_vulpes
ENSPVAG00000005270PABPN16488.265ENSXETG00000014597pabpn17285.981Xenopus_tropicalis
ENSPVAG00000005270PABPN15767.797ENSXCOG00000005158pabpn18980.921Xiphophorus_couchianus
ENSPVAG00000005270PABPN17967.490ENSXMAG00000006196pabpn18880.000Xiphophorus_maculatus

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