EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000005373 (Gene tree)
Gene ID: -
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 69562 bases
Position: chrscaffold_266:331791-401352
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000005088	La	PF05383.17	3.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000005373	LARP1B-201	2697	-	ENSPVAP00000005088	899 (aa)	-	UPI00018B3DCC

Gene Model

Click here to download ENSPVAG00000005373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000005373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000005373	LARP1B	96	58.869	ENSPVAG00000002262	LARP1	81	58.869

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000005373	LARP1B	99	82.495	ENSG00000138709	LARP1B	96	91.667	Homo_sapiens
ENSPVAG00000005373	LARP1B	97	54.011	ENSAPOG00000020101	larp1b	85	52.729	Acanthochromis_polyacanthus
ENSPVAG00000005373	LARP1B	61	89.599	ENSAMEG00000002748	LARP1B	99	89.599	Ailuropoda_melanoleuca
ENSPVAG00000005373	LARP1B	76	59.110	ENSACIG00000023890	larp1b	82	51.106	Amphilophus_citrinellus
ENSPVAG00000005373	LARP1B	69	63.507	ENSAOCG00000014268	larp1b	84	56.305	Amphiprion_ocellaris
ENSPVAG00000005373	LARP1B	97	54.707	ENSAPEG00000004126	larp1b	84	54.130	Amphiprion_percula
ENSPVAG00000005373	LARP1B	99	52.478	ENSATEG00000017849	larp1b	84	53.233	Anabas_testudineus
ENSPVAG00000005373	LARP1B	96	64.430	ENSAPLG00000010129	LARP1B	98	64.726	Anas_platyrhynchos
ENSPVAG00000005373	LARP1B	93	72.652	ENSACAG00000011338	LARP1B	86	72.652	Anolis_carolinensis
ENSPVAG00000005373	LARP1B	90	77.056	ENSANAG00000034618	LARP1B	97	77.600	Aotus_nancymaae
ENSPVAG00000005373	LARP1B	96	52.539	ENSACLG00000011948	larp1b	82	52.236	Astatotilapia_calliptera
ENSPVAG00000005373	LARP1B	84	52.684	ENSAMXG00000006805	larp1b	82	49.786	Astyanax_mexicanus
ENSPVAG00000005373	LARP1B	100	85.635	ENSBTAG00000012135	LARP1B	98	85.770	Bos_taurus
ENSPVAG00000005373	LARP1B	99	83.481	ENSCJAG00000003338	LARP1B	100	83.481	Callithrix_jacchus
ENSPVAG00000005373	LARP1B	100	87.168	ENSCAFG00000003831	LARP1B	100	85.714	Canis_familiaris
ENSPVAG00000005373	LARP1B	100	86.026	ENSCAFG00020018899	LARP1B	98	87.538	Canis_lupus_dingo
ENSPVAG00000005373	LARP1B	100	85.214	ENSCHIG00000023144	LARP1B	99	84.704	Capra_hircus
ENSPVAG00000005373	LARP1B	99	83.151	ENSCCAG00000021948	LARP1B	100	83.151	Cebus_capucinus
ENSPVAG00000005373	LARP1B	99	82.366	ENSCATG00000013541	LARP1B	100	82.366	Cercocebus_atys
ENSPVAG00000005373	LARP1B	99	83.406	ENSCSAG00000003582	LARP1B	100	83.406	Chlorocebus_sabaeus
ENSPVAG00000005373	LARP1B	100	75.027	ENSCHOG00000005354	LARP1B	100	75.705	Choloepus_hoffmanni
ENSPVAG00000005373	LARP1B	99	72.797	ENSCPBG00000017480	LARP1B	86	73.128	Chrysemys_picta_bellii
ENSPVAG00000005373	LARP1B	99	78.532	ENSCANG00000026958	LARP1B	100	78.455	Colobus_angolensis_palliatus
ENSPVAG00000005373	LARP1B	96	50.654	ENSCSEG00000013519	larp1b	84	50.318	Cynoglossus_semilaevis
ENSPVAG00000005373	LARP1B	97	51.948	ENSCVAG00000005046	larp1b	84	51.589	Cyprinodon_variegatus
ENSPVAG00000005373	LARP1B	100	51.130	ENSDARG00000061169	larp1b	81	52.207	Danio_rerio
ENSPVAG00000005373	LARP1B	56	84.314	ENSDNOG00000018765	-	99	84.314	Dasypus_novemcinctus
ENSPVAG00000005373	LARP1B	89	77.311	ENSETEG00000012497	LARP1B	89	77.311	Echinops_telfairi
ENSPVAG00000005373	LARP1B	94	48.850	ENSEBUG00000003668	larp1b	87	49.562	Eptatretus_burgeri
ENSPVAG00000005373	LARP1B	100	84.498	ENSEASG00005018106	LARP1B	99	88.687	Equus_asinus_asinus
ENSPVAG00000005373	LARP1B	100	85.509	ENSECAG00000001088	LARP1B	81	85.509	Equus_caballus
ENSPVAG00000005373	LARP1B	67	56.709	ENSELUG00000023774	larp1b	75	54.731	Esox_lucius
ENSPVAG00000005373	LARP1B	57	87.500	ENSFCAG00000014650	-	98	87.500	Felis_catus
ENSPVAG00000005373	LARP1B	99	61.806	ENSFALG00000008098	LARP1B	99	63.221	Ficedula_albicollis
ENSPVAG00000005373	LARP1B	99	53.035	ENSFHEG00000010264	larp1b	81	52.985	Fundulus_heteroclitus
ENSPVAG00000005373	LARP1B	78	52.422	ENSGMOG00000005207	larp1b	67	52.774	Gadus_morhua
ENSPVAG00000005373	LARP1B	98	64.477	ENSGALG00000010207	LARP1B	87	64.922	Gallus_gallus
ENSPVAG00000005373	LARP1B	90	55.981	ENSGAFG00000012012	larp1b	96	54.861	Gambusia_affinis
ENSPVAG00000005373	LARP1B	97	51.201	ENSGACG00000004609	larp1b	83	52.620	Gasterosteus_aculeatus
ENSPVAG00000005373	LARP1B	100	73.267	ENSGAGG00000017209	LARP1B	85	73.597	Gopherus_agassizii
ENSPVAG00000005373	LARP1B	99	82.713	ENSGGOG00000015900	LARP1B	100	82.932	Gorilla_gorilla
ENSPVAG00000005373	LARP1B	96	52.655	ENSHBUG00000009730	larp1b	82	52.350	Haplochromis_burtoni
ENSPVAG00000005373	LARP1B	76	57.615	ENSHCOG00000000918	larp1b	96	58.333	Hippocampus_comes
ENSPVAG00000005373	LARP1B	84	57.942	ENSIPUG00000012138	larp1b	80	52.603	Ictalurus_punctatus
ENSPVAG00000005373	LARP1B	96	52.772	ENSKMAG00000011589	larp1b	86	52.258	Kryptolebias_marmoratus
ENSPVAG00000005373	LARP1B	97	53.063	ENSLBEG00000005655	larp1b	85	52.721	Labrus_bergylta
ENSPVAG00000005373	LARP1B	99	67.370	ENSLACG00000015247	LARP1B	100	66.158	Latimeria_chalumnae
ENSPVAG00000005373	LARP1B	99	63.090	ENSLOCG00000010684	larp1b	92	63.294	Lepisosteus_oculatus
ENSPVAG00000005373	LARP1B	99	83.680	ENSMFAG00000002218	LARP1B	100	83.680	Macaca_fascicularis
ENSPVAG00000005373	LARP1B	99	83.790	ENSMMUG00000021347	LARP1B	100	83.790	Macaca_mulatta
ENSPVAG00000005373	LARP1B	93	82.353	ENSMNEG00000030406	LARP1B	100	82.353	Macaca_nemestrina
ENSPVAG00000005373	LARP1B	99	79.956	ENSMLEG00000009306	LARP1B	100	80.066	Mandrillus_leucophaeus
ENSPVAG00000005373	LARP1B	99	52.682	ENSMAMG00000000081	larp1b	85	53.863	Mastacembelus_armatus
ENSPVAG00000005373	LARP1B	76	60.761	ENSMZEG00005002545	larp1b	96	57.274	Maylandia_zebra
ENSPVAG00000005373	LARP1B	94	59.417	ENSMGAG00000004809	LARP1B	98	59.888	Meleagris_gallopavo
ENSPVAG00000005373	LARP1B	100	86.947	ENSMICG00000036111	LARP1B	100	86.947	Microcebus_murinus
ENSPVAG00000005373	LARP1B	56	67.129	ENSMICG00000028052	-	99	67.129	Microcebus_murinus
ENSPVAG00000005373	LARP1B	99	79.322	ENSMODG00000012300	LARP1B	81	79.759	Monodelphis_domestica
ENSPVAG00000005373	LARP1B	97	53.399	ENSMALG00000003638	larp1b	83	54.018	Monopterus_albus
ENSPVAG00000005373	LARP1B	100	86.615	ENSMPUG00000017365	LARP1B	81	86.615	Mustela_putorius_furo
ENSPVAG00000005373	LARP1B	96	81.090	ENSMLUG00000010229	LARP1B	97	81.424	Myotis_lucifugus
ENSPVAG00000005373	LARP1B	76	56.808	ENSNBRG00000023846	larp1b	76	54.654	Neolamprologus_brichardi
ENSPVAG00000005373	LARP1B	99	82.077	ENSNLEG00000013819	LARP1B	99	83.757	Nomascus_leucogenys
ENSPVAG00000005373	LARP1B	87	78.095	ENSMEUG00000010308	LARP1B	88	78.095	Notamacropus_eugenii
ENSPVAG00000005373	LARP1B	100	66.340	ENSOPRG00000005478	LARP1B	100	66.449	Ochotona_princeps
ENSPVAG00000005373	LARP1B	96	51.747	ENSONIG00000012386	larp1b	93	51.864	Oreochromis_niloticus
ENSPVAG00000005373	LARP1B	100	83.407	ENSOCUG00000013330	LARP1B	98	83.407	Oryctolagus_cuniculus
ENSPVAG00000005373	LARP1B	98	51.623	ENSORLG00000017954	larp1b	84	51.554	Oryzias_latipes
ENSPVAG00000005373	LARP1B	99	51.561	ENSORLG00020013081	larp1b	84	51.554	Oryzias_latipes_hni
ENSPVAG00000005373	LARP1B	99	52.478	ENSORLG00015009580	larp1b	84	52.417	Oryzias_latipes_hsok
ENSPVAG00000005373	LARP1B	97	52.193	ENSOMEG00000004210	larp1b	83	52.402	Oryzias_melastigma
ENSPVAG00000005373	LARP1B	95	83.875	ENSOGAG00000005771	LARP1B	98	83.875	Otolemur_garnettii
ENSPVAG00000005373	LARP1B	99	84.590	ENSOARG00000015300	LARP1B	100	84.590	Ovis_aries
ENSPVAG00000005373	LARP1B	99	82.495	ENSPPAG00000030439	LARP1B	100	82.713	Pan_paniscus
ENSPVAG00000005373	LARP1B	57	87.500	ENSPPRG00000002743	-	98	87.500	Panthera_pardus
ENSPVAG00000005373	LARP1B	57	87.500	ENSPTIG00000011225	LARP1B	98	87.500	Panthera_tigris_altaica
ENSPVAG00000005373	LARP1B	99	82.495	ENSPTRG00000016437	LARP1B	100	82.713	Pan_troglodytes
ENSPVAG00000005373	LARP1B	99	83.571	ENSPANG00000012488	LARP1B	100	83.571	Papio_anubis
ENSPVAG00000005373	LARP1B	76	53.191	ENSPKIG00000014360	larp1b	88	48.506	Paramormyrops_kingsleyae
ENSPVAG00000005373	LARP1B	95	74.048	ENSPSIG00000012885	LARP1B	93	74.510	Pelodiscus_sinensis
ENSPVAG00000005373	LARP1B	78	58.014	ENSPMGG00000007207	larp1b	83	58.014	Periophthalmus_magnuspinnatus
ENSPVAG00000005373	LARP1B	94	49.439	ENSPMAG00000002700	larp1b	97	51.121	Petromyzon_marinus
ENSPVAG00000005373	LARP1B	99	78.375	ENSPCIG00000026516	LARP1B	97	82.787	Phascolarctos_cinereus
ENSPVAG00000005373	LARP1B	100	52.763	ENSPFOG00000019519	larp1b	84	52.966	Poecilia_formosa
ENSPVAG00000005373	LARP1B	56	49.721	ENSPFOG00000022837	-	77	49.534	Poecilia_formosa
ENSPVAG00000005373	LARP1B	100	54.118	ENSPLAG00000007115	larp1b	84	54.011	Poecilia_latipinna
ENSPVAG00000005373	LARP1B	100	53.591	ENSPMEG00000001224	larp1b	84	53.483	Poecilia_mexicana
ENSPVAG00000005373	LARP1B	100	78.930	ENSPCAG00000007546	LARP1B	100	78.930	Procavia_capensis
ENSPVAG00000005373	LARP1B	89	86.957	ENSPCOG00000021874	LARP1B	99	86.898	Propithecus_coquereli
ENSPVAG00000005373	LARP1B	76	60.174	ENSPNYG00000017357	larp1b	94	57.540	Pundamilia_nyererei
ENSPVAG00000005373	LARP1B	99	50.212	ENSPNAG00000008823	larp1b	85	52.244	Pygocentrus_nattereri
ENSPVAG00000005373	LARP1B	57	82.387	ENSRBIG00000039982	-	99	82.779	Rhinopithecus_bieti
ENSPVAG00000005373	LARP1B	99	83.133	ENSRROG00000030771	LARP1B	100	83.352	Rhinopithecus_roxellana
ENSPVAG00000005373	LARP1B	73	81.493	ENSSHAG00000014474	LARP1B	99	81.709	Sarcophilus_harrisii
ENSPVAG00000005373	LARP1B	96	52.845	ENSSMAG00000006347	larp1b	91	52.478	Scophthalmus_maximus
ENSPVAG00000005373	LARP1B	96	53.548	ENSSDUG00000004182	larp1b	83	52.632	Seriola_dumerili
ENSPVAG00000005373	LARP1B	78	58.274	ENSSLDG00000014613	larp1b	70	57.322	Seriola_lalandi_dorsalis
ENSPVAG00000005373	LARP1B	97	64.954	ENSSPUG00000011837	LARP1B	98	64.954	Sphenodon_punctatus
ENSPVAG00000005373	LARP1B	97	53.289	ENSSPAG00000017772	larp1b	84	53.383	Stegastes_partitus
ENSPVAG00000005373	LARP1B	100	83.518	ENSSSCG00000034280	LARP1B	99	97.802	Sus_scrofa
ENSPVAG00000005373	LARP1B	84	66.447	ENSTGUG00000002098	-	97	62.215	Taeniopygia_guttata
ENSPVAG00000005373	LARP1B	97	52.159	ENSTRUG00000005612	larp1b	83	52.649	Takifugu_rubripes
ENSPVAG00000005373	LARP1B	96	51.683	ENSTNIG00000012398	larp1b	94	52.070	Tetraodon_nigroviridis
ENSPVAG00000005373	LARP1B	87	83.810	ENSTBEG00000004177	LARP1B	88	83.810	Tupaia_belangeri
ENSPVAG00000005373	LARP1B	100	75.410	ENSTTRG00000012984	LARP1B	100	75.410	Tursiops_truncatus
ENSPVAG00000005373	LARP1B	100	86.726	ENSUMAG00000007373	LARP1B	98	86.726	Ursus_maritimus
ENSPVAG00000005373	LARP1B	99	76.101	ENSVPAG00000007223	LARP1B	100	76.101	Vicugna_pacos
ENSPVAG00000005373	LARP1B	100	87.058	ENSVVUG00000011307	LARP1B	99	88.998	Vulpes_vulpes
ENSPVAG00000005373	LARP1B	97	58.002	ENSXETG00000022512	larp1b	86	57.542	Xenopus_tropicalis
ENSPVAG00000005373	LARP1B	72	57.576	ENSXCOG00000004435	larp1b	71	56.313	Xiphophorus_couchianus
ENSPVAG00000005373	LARP1B	97	53.905	ENSXMAG00000008150	larp1b	84	53.312	Xiphophorus_maculatus