EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000005511 (Gene tree)
Gene ID: -
Gene Symbol: SNRPD1
Alias: HsT2456|SNRPD|Sm-D1
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 11421 bases
Position: chrscaffold_709:5211-16631
Accession: 11158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000005215	LSM	PF01423.22	6.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000005511	SNRPD1-201	450	-	ENSPVAP00000005215	149 (aa)	-	UPI00018B3741

Gene Model

Click here to download ENSPVAG00000005511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000005511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000005511	SNRPD1	80	100.000	ENSG00000167088	SNRPD1	100	100.000	Homo_sapiens
ENSPVAG00000005511	SNRPD1	80	96.639	ENSAPOG00000019446	snrpd1	65	96.639	Acanthochromis_polyacanthus
ENSPVAG00000005511	SNRPD1	79	98.291	ENSAMEG00000002576	SNRPD1	100	98.291	Ailuropoda_melanoleuca
ENSPVAG00000005511	SNRPD1	75	96.429	ENSACIG00000011263	snrpd1	100	96.429	Amphilophus_citrinellus
ENSPVAG00000005511	SNRPD1	80	96.639	ENSAOCG00000007406	snrpd1	100	96.639	Amphiprion_ocellaris
ENSPVAG00000005511	SNRPD1	80	92.437	ENSAPEG00000014961	snrpd1	100	92.437	Amphiprion_percula
ENSPVAG00000005511	SNRPD1	75	96.429	ENSAPEG00000012539	SNRPD1	100	96.429	Amphiprion_percula
ENSPVAG00000005511	SNRPD1	80	96.639	ENSATEG00000014399	snrpd1	100	96.639	Anabas_testudineus
ENSPVAG00000005511	SNRPD1	77	100.000	ENSAPLG00000012256	SNRPD1	97	100.000	Anas_platyrhynchos
ENSPVAG00000005511	SNRPD1	80	100.000	ENSACAG00000006364	SNRPD1	100	100.000	Anolis_carolinensis
ENSPVAG00000005511	SNRPD1	80	100.000	ENSANAG00000025641	SNRPD1	100	100.000	Aotus_nancymaae
ENSPVAG00000005511	SNRPD1	75	96.429	ENSACLG00000017406	snrpd1	100	96.429	Astatotilapia_calliptera
ENSPVAG00000005511	SNRPD1	80	97.479	ENSAMXG00000004589	snrpd1	100	97.479	Astyanax_mexicanus
ENSPVAG00000005511	SNRPD1	63	94.681	ENSBTAG00000055316	-	81	94.681	Bos_taurus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSBTAG00000008292	SNRPD1	100	100.000	Bos_taurus
ENSPVAG00000005511	SNRPD1	77	96.522	ENSBTAG00000012376	-	86	96.522	Bos_taurus
ENSPVAG00000005511	SNRPD1	75	96.429	ENSBTAG00000047266	-	94	96.429	Bos_taurus
ENSPVAG00000005511	SNRPD1	59	80.682	WBGene00004916	snr-3	76	76.042	Caenorhabditis_elegans
ENSPVAG00000005511	SNRPD1	80	100.000	ENSCJAG00000042955	SNRPD1	100	100.000	Callithrix_jacchus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSCAFG00000018247	SNRPD1	100	100.000	Canis_familiaris
ENSPVAG00000005511	SNRPD1	64	100.000	ENSCAFG00020015914	SNRPD1	74	100.000	Canis_lupus_dingo
ENSPVAG00000005511	SNRPD1	79	99.145	ENSCHIG00000005557	SNRPD1	98	99.145	Capra_hircus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSTSYG00000030028	SNRPD1	100	100.000	Carlito_syrichta
ENSPVAG00000005511	SNRPD1	77	99.130	ENSCAPG00000008103	SNRPD1	99	99.130	Cavia_aperea
ENSPVAG00000005511	SNRPD1	80	100.000	ENSCPOG00000004679	SNRPD1	100	100.000	Cavia_porcellus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSCCAG00000032658	SNRPD1	100	100.000	Cebus_capucinus
ENSPVAG00000005511	SNRPD1	80	99.160	ENSCCAG00000020611	-	100	99.160	Cebus_capucinus
ENSPVAG00000005511	SNRPD1	64	95.833	ENSCCAG00000005390	-	81	95.833	Cebus_capucinus
ENSPVAG00000005511	SNRPD1	80	96.639	ENSCCAG00000016652	-	100	96.639	Cebus_capucinus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSCATG00000039978	SNRPD1	100	100.000	Cercocebus_atys
ENSPVAG00000005511	SNRPD1	80	100.000	ENSCLAG00000008691	SNRPD1	100	100.000	Chinchilla_lanigera
ENSPVAG00000005511	SNRPD1	80	100.000	ENSCSAG00000017654	SNRPD1	100	100.000	Chlorocebus_sabaeus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSCPBG00000023143	SNRPD1	100	100.000	Chrysemys_picta_bellii
ENSPVAG00000005511	SNRPD1	58	87.209	ENSCING00000024100	-	69	87.209	Ciona_intestinalis
ENSPVAG00000005511	SNRPD1	58	85.057	ENSCSAVG00000004578	-	70	85.057	Ciona_savignyi
ENSPVAG00000005511	SNRPD1	80	100.000	ENSCGRG00001021055	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSPVAG00000005511	SNRPD1	64	75.000	ENSCGRG00001009945	-	85	75.000	Cricetulus_griseus_chok1gshd
ENSPVAG00000005511	SNRPD1	64	75.000	ENSCGRG00000006224	-	85	75.000	Cricetulus_griseus_crigri
ENSPVAG00000005511	SNRPD1	80	100.000	ENSCGRG00000000490	-	100	100.000	Cricetulus_griseus_crigri
ENSPVAG00000005511	SNRPD1	64	94.737	ENSCSEG00000018141	snrpd1	81	94.792	Cynoglossus_semilaevis
ENSPVAG00000005511	SNRPD1	80	96.639	ENSCVAG00000000534	snrpd1	100	96.639	Cyprinodon_variegatus
ENSPVAG00000005511	SNRPD1	80	97.479	ENSDARG00000011648	snrpd1	100	97.479	Danio_rerio
ENSPVAG00000005511	SNRPD1	80	100.000	ENSDNOG00000040310	SNRPD1	100	100.000	Dasypus_novemcinctus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSDORG00000008349	Snrpd1	100	100.000	Dipodomys_ordii
ENSPVAG00000005511	SNRPD1	63	82.979	FBgn0261933	SmD1	76	82.979	Drosophila_melanogaster
ENSPVAG00000005511	SNRPD1	59	100.000	ENSETEG00000011689	SNRPD1	74	100.000	Echinops_telfairi
ENSPVAG00000005511	SNRPD1	75	92.857	ENSEBUG00000003170	snrpd1	94	92.857	Eptatretus_burgeri
ENSPVAG00000005511	SNRPD1	75	100.000	ENSEASG00005002433	SNRPD1	100	100.000	Equus_asinus_asinus
ENSPVAG00000005511	SNRPD1	75	100.000	ENSECAG00000014373	SNRPD1	100	100.000	Equus_caballus
ENSPVAG00000005511	SNRPD1	60	100.000	ENSEEUG00000004987	SNRPD1	100	100.000	Erinaceus_europaeus
ENSPVAG00000005511	SNRPD1	74	85.586	ENSELUG00000000088	snrpd1	79	95.745	Esox_lucius
ENSPVAG00000005511	SNRPD1	80	100.000	ENSFCAG00000012352	SNRPD1	100	100.000	Felis_catus
ENSPVAG00000005511	SNRPD1	75	100.000	ENSFALG00000002646	SNRPD1	100	100.000	Ficedula_albicollis
ENSPVAG00000005511	SNRPD1	87	93.846	ENSFDAG00000005735	-	54	93.846	Fukomys_damarensis
ENSPVAG00000005511	SNRPD1	80	97.479	ENSGMOG00000015607	snrpd1	100	97.479	Gadus_morhua
ENSPVAG00000005511	SNRPD1	80	100.000	ENSGALG00000041334	SNRPD1	100	100.000	Gallus_gallus
ENSPVAG00000005511	SNRPD1	80	96.639	ENSGAFG00000011171	snrpd1	100	96.639	Gambusia_affinis
ENSPVAG00000005511	SNRPD1	80	97.479	ENSGACG00000005201	SNRPD1	100	97.479	Gasterosteus_aculeatus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSGAGG00000011197	SNRPD1	100	100.000	Gopherus_agassizii
ENSPVAG00000005511	SNRPD1	80	100.000	ENSGGOG00000041053	SNRPD1	100	100.000	Gorilla_gorilla
ENSPVAG00000005511	SNRPD1	64	94.792	ENSGGOG00000026706	-	80	94.792	Gorilla_gorilla
ENSPVAG00000005511	SNRPD1	80	96.639	ENSHBUG00000003236	snrpd1	100	96.639	Haplochromis_burtoni
ENSPVAG00000005511	SNRPD1	80	100.000	ENSHGLG00000007152	SNRPD1	100	100.000	Heterocephalus_glaber_female
ENSPVAG00000005511	SNRPD1	80	100.000	ENSHGLG00100008618	SNRPD1	100	100.000	Heterocephalus_glaber_male
ENSPVAG00000005511	SNRPD1	80	96.639	ENSIPUG00000003576	snrpd1	100	96.639	Ictalurus_punctatus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSSTOG00000000485	SNRPD1	100	100.000	Ictidomys_tridecemlineatus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSJJAG00000017698	Snrpd1	100	100.000	Jaculus_jaculus
ENSPVAG00000005511	SNRPD1	80	96.639	ENSKMAG00000005987	snrpd1	100	96.639	Kryptolebias_marmoratus
ENSPVAG00000005511	SNRPD1	80	96.639	ENSLBEG00000003327	snrpd1	100	96.639	Labrus_bergylta
ENSPVAG00000005511	SNRPD1	80	100.000	ENSLACG00000001955	SNRPD1	100	100.000	Latimeria_chalumnae
ENSPVAG00000005511	SNRPD1	79	97.436	ENSLOCG00000002003	snrpd1	100	97.436	Lepisosteus_oculatus
ENSPVAG00000005511	SNRPD1	79	98.305	ENSLAFG00000005819	SNRPD1	100	98.305	Loxodonta_africana
ENSPVAG00000005511	SNRPD1	80	100.000	ENSMFAG00000042080	SNRPD1	100	100.000	Macaca_fascicularis
ENSPVAG00000005511	SNRPD1	77	100.000	ENSMMUG00000003992	SNRPD1	97	100.000	Macaca_mulatta
ENSPVAG00000005511	SNRPD1	80	100.000	ENSMNEG00000041296	SNRPD1	100	100.000	Macaca_nemestrina
ENSPVAG00000005511	SNRPD1	80	100.000	ENSMLEG00000028659	SNRPD1	100	100.000	Mandrillus_leucophaeus
ENSPVAG00000005511	SNRPD1	80	96.639	ENSMAMG00000012971	snrpd1	100	96.639	Mastacembelus_armatus
ENSPVAG00000005511	SNRPD1	80	96.639	ENSMZEG00005004685	snrpd1	100	96.639	Maylandia_zebra
ENSPVAG00000005511	SNRPD1	77	100.000	ENSMGAG00000011598	SNRPD1	95	100.000	Meleagris_gallopavo
ENSPVAG00000005511	SNRPD1	64	83.333	ENSMAUG00000016467	-	86	83.333	Mesocricetus_auratus
ENSPVAG00000005511	SNRPD1	65	94.845	ENSMAUG00000006829	-	62	94.845	Mesocricetus_auratus
ENSPVAG00000005511	SNRPD1	64	83.333	ENSMAUG00000016502	-	86	83.333	Mesocricetus_auratus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSMICG00000044066	SNRPD1	100	100.000	Microcebus_murinus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSMOCG00000017367	Snrpd1	100	100.000	Microtus_ochrogaster
ENSPVAG00000005511	SNRPD1	80	96.639	ENSMMOG00000019089	snrpd1	100	96.639	Mola_mola
ENSPVAG00000005511	SNRPD1	80	100.000	ENSMODG00000021487	SNRPD1	100	100.000	Monodelphis_domestica
ENSPVAG00000005511	SNRPD1	80	96.639	ENSMALG00000014459	snrpd1	100	96.639	Monopterus_albus
ENSPVAG00000005511	SNRPD1	80	100.000	MGP_CAROLIEiJ_G0021994	Snrpd1	100	100.000	Mus_caroli
ENSPVAG00000005511	SNRPD1	80	100.000	ENSMUSG00000002477	Snrpd1	100	100.000	Mus_musculus
ENSPVAG00000005511	SNRPD1	80	100.000	MGP_PahariEiJ_G0018731	Snrpd1	100	100.000	Mus_pahari
ENSPVAG00000005511	SNRPD1	80	100.000	MGP_SPRETEiJ_G0022910	Snrpd1	100	100.000	Mus_spretus
ENSPVAG00000005511	SNRPD1	80	99.160	ENSMPUG00000020041	-	100	99.160	Mustela_putorius_furo
ENSPVAG00000005511	SNRPD1	79	98.291	ENSMPUG00000005567	-	100	98.291	Mustela_putorius_furo
ENSPVAG00000005511	SNRPD1	78	97.414	ENSMLUG00000009124	SNRPD1	90	97.414	Myotis_lucifugus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSNGAG00000023946	Snrpd1	100	100.000	Nannospalax_galili
ENSPVAG00000005511	SNRPD1	63	95.745	ENSNBRG00000012119	snrpd1	78	95.745	Neolamprologus_brichardi
ENSPVAG00000005511	SNRPD1	80	97.479	ENSNLEG00000031430	SNRPD1	100	97.479	Nomascus_leucogenys
ENSPVAG00000005511	SNRPD1	80	100.000	ENSODEG00000005764	SNRPD1	100	100.000	Octodon_degus
ENSPVAG00000005511	SNRPD1	80	96.639	ENSONIG00000002486	snrpd1	100	96.639	Oreochromis_niloticus
ENSPVAG00000005511	SNRPD1	66	88.776	ENSOANG00000004638	-	82	88.776	Ornithorhynchus_anatinus
ENSPVAG00000005511	SNRPD1	80	99.160	ENSOCUG00000014399	-	100	99.160	Oryctolagus_cuniculus
ENSPVAG00000005511	SNRPD1	79	98.291	ENSOCUG00000023761	-	100	98.291	Oryctolagus_cuniculus
ENSPVAG00000005511	SNRPD1	75	96.429	ENSORLG00000012516	snrpd1	100	96.429	Oryzias_latipes
ENSPVAG00000005511	SNRPD1	80	96.639	ENSORLG00020005743	snrpd1	100	96.639	Oryzias_latipes_hni
ENSPVAG00000005511	SNRPD1	80	96.639	ENSORLG00015013402	snrpd1	100	96.639	Oryzias_latipes_hsok
ENSPVAG00000005511	SNRPD1	80	96.639	ENSOMEG00000011571	snrpd1	100	96.639	Oryzias_melastigma
ENSPVAG00000005511	SNRPD1	79	98.291	ENSOGAG00000007833	SNRPD1	98	98.291	Otolemur_garnettii
ENSPVAG00000005511	SNRPD1	76	92.920	ENSOARG00000003413	-	85	92.920	Ovis_aries
ENSPVAG00000005511	SNRPD1	80	100.000	ENSPPAG00000042593	SNRPD1	100	100.000	Pan_paniscus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSPPRG00000002399	SNRPD1	100	100.000	Panthera_pardus
ENSPVAG00000005511	SNRPD1	75	72.321	ENSPPRG00000005009	-	92	72.321	Panthera_pardus
ENSPVAG00000005511	SNRPD1	77	100.000	ENSPTIG00000013206	SNRPD1	100	100.000	Panthera_tigris_altaica
ENSPVAG00000005511	SNRPD1	80	100.000	ENSPTRG00000009909	SNRPD1	100	100.000	Pan_troglodytes
ENSPVAG00000005511	SNRPD1	68	94.118	ENSPTRG00000050159	-	87	94.118	Pan_troglodytes
ENSPVAG00000005511	SNRPD1	80	100.000	ENSPANG00000023478	SNRPD1	100	100.000	Papio_anubis
ENSPVAG00000005511	SNRPD1	80	97.479	ENSPKIG00000003985	SNRPD1	100	97.479	Paramormyrops_kingsleyae
ENSPVAG00000005511	SNRPD1	70	95.238	ENSPKIG00000021610	snrpd1	94	95.238	Paramormyrops_kingsleyae
ENSPVAG00000005511	SNRPD1	80	96.639	ENSPMGG00000001862	snrpd1	100	96.639	Periophthalmus_magnuspinnatus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSPEMG00000014773	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSPVAG00000005511	SNRPD1	68	82.692	ENSPMAG00000003938	-	85	82.692	Petromyzon_marinus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSPCIG00000020320	SNRPD1	100	100.000	Phascolarctos_cinereus
ENSPVAG00000005511	SNRPD1	64	95.833	ENSPFOG00000012448	SNRPD1	85	95.833	Poecilia_formosa
ENSPVAG00000005511	SNRPD1	64	95.833	ENSPLAG00000006738	snrpd1	85	95.833	Poecilia_latipinna
ENSPVAG00000005511	SNRPD1	64	95.833	ENSPMEG00000021942	snrpd1	85	95.833	Poecilia_mexicana
ENSPVAG00000005511	SNRPD1	80	96.639	ENSPREG00000007094	snrpd1	100	96.639	Poecilia_reticulata
ENSPVAG00000005511	SNRPD1	80	100.000	ENSPPYG00000025874	SNRPD1	100	100.000	Pongo_abelii
ENSPVAG00000005511	SNRPD1	80	100.000	ENSPCOG00000013327	SNRPD1	100	100.000	Propithecus_coquereli
ENSPVAG00000005511	SNRPD1	80	96.639	ENSPNAG00000017824	snrpd1	100	96.639	Pygocentrus_nattereri
ENSPVAG00000005511	SNRPD1	80	100.000	ENSRNOG00000013714	Snrpd1	100	100.000	Rattus_norvegicus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSRBIG00000022996	SNRPD1	100	100.000	Rhinopithecus_bieti
ENSPVAG00000005511	SNRPD1	80	100.000	ENSRROG00000027640	SNRPD1	100	100.000	Rhinopithecus_roxellana
ENSPVAG00000005511	SNRPD1	80	100.000	ENSSBOG00000020998	SNRPD1	100	100.000	Saimiri_boliviensis_boliviensis
ENSPVAG00000005511	SNRPD1	80	100.000	ENSSHAG00000011791	SNRPD1	100	100.000	Sarcophilus_harrisii
ENSPVAG00000005511	SNRPD1	75	95.536	ENSSFOG00015008809	-	94	95.536	Scleropages_formosus
ENSPVAG00000005511	SNRPD1	75	95.536	ENSSFOG00015022253	-	94	95.536	Scleropages_formosus
ENSPVAG00000005511	SNRPD1	75	95.536	ENSSMAG00000008765	snrpd1	94	95.536	Scophthalmus_maximus
ENSPVAG00000005511	SNRPD1	72	95.370	ENSSDUG00000010521	snrpd1	92	94.495	Seriola_dumerili
ENSPVAG00000005511	SNRPD1	80	96.639	ENSSLDG00000011858	snrpd1	100	96.639	Seriola_lalandi_dorsalis
ENSPVAG00000005511	SNRPD1	80	100.000	ENSSPUG00000002824	SNRPD1	100	100.000	Sphenodon_punctatus
ENSPVAG00000005511	SNRPD1	75	96.429	ENSSPAG00000015229	snrpd1	100	96.429	Stegastes_partitus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSSSCG00000003701	SNRPD1	100	100.000	Sus_scrofa
ENSPVAG00000005511	SNRPD1	77	100.000	ENSTGUG00000005095	SNRPD1	97	100.000	Taeniopygia_guttata
ENSPVAG00000005511	SNRPD1	75	96.429	ENSTRUG00000008977	snrpd1	100	96.429	Takifugu_rubripes
ENSPVAG00000005511	SNRPD1	64	91.667	ENSTNIG00000001224	snrpd1	92	91.667	Tetraodon_nigroviridis
ENSPVAG00000005511	SNRPD1	59	100.000	ENSTBEG00000013776	SNRPD1	100	100.000	Tupaia_belangeri
ENSPVAG00000005511	SNRPD1	77	100.000	ENSTTRG00000002654	SNRPD1	100	100.000	Tursiops_truncatus
ENSPVAG00000005511	SNRPD1	77	100.000	ENSUAMG00000013431	SNRPD1	97	100.000	Ursus_americanus
ENSPVAG00000005511	SNRPD1	80	100.000	ENSUMAG00000019740	SNRPD1	100	100.000	Ursus_maritimus
ENSPVAG00000005511	SNRPD1	95	92.958	ENSVPAG00000010056	SNRPD1	95	92.958	Vicugna_pacos
ENSPVAG00000005511	SNRPD1	75	100.000	ENSVVUG00000004009	SNRPD1	100	100.000	Vulpes_vulpes
ENSPVAG00000005511	SNRPD1	80	98.319	ENSXETG00000027354	snrpd1	100	98.319	Xenopus_tropicalis
ENSPVAG00000005511	SNRPD1	80	96.639	ENSXCOG00000020108	snrpd1	100	96.639	Xiphophorus_couchianus
ENSPVAG00000005511	SNRPD1	80	96.639	ENSXMAG00000003368	snrpd1	100	96.639	Xiphophorus_maculatus