EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000005689 (Gene tree)
Gene ID: -
Gene Symbol: POLR1C
Alias: RPA39|RPA40|RPA5|RPAC1
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 3257 bases
Position: chrGeneScaffold_1299:102674-105930
Accession: 20194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000005379	RNA_pol_A_bac	PF01000.26	6.2e-24	1	1
ENSPVAP00000005379	RNA_pol_L	PF01193.24	6.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000005689	POLR1C-201	1041	-	ENSPVAP00000005379	346 (aa)	-	UPI00018B2C3E

Gene Model

Click here to download ENSPVAG00000005689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000005689's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000005689	POLR1C	100	88.150	ENSG00000171453	POLR1C	100	88.150	Homo_sapiens
ENSPVAG00000005689	POLR1C	60	36.765	ENSAPOG00000011708	polr2c	65	36.765	Acanthochromis_polyacanthus
ENSPVAG00000005689	POLR1C	99	68.195	ENSAPOG00000024356	polr1c	99	68.195	Acanthochromis_polyacanthus
ENSPVAG00000005689	POLR1C	100	86.994	ENSAMEG00000012205	POLR1C	99	86.994	Ailuropoda_melanoleuca
ENSPVAG00000005689	POLR1C	94	57.622	ENSACIG00000016268	polr1c	90	57.622	Amphilophus_citrinellus
ENSPVAG00000005689	POLR1C	99	66.189	ENSAOCG00000011687	polr1c	96	66.189	Amphiprion_ocellaris
ENSPVAG00000005689	POLR1C	60	36.765	ENSAOCG00000015665	polr2c	65	36.765	Amphiprion_ocellaris
ENSPVAG00000005689	POLR1C	60	36.765	ENSAOCG00000010477	-	65	36.765	Amphiprion_ocellaris
ENSPVAG00000005689	POLR1C	60	36.765	ENSAPEG00000007221	polr2c	65	36.765	Amphiprion_percula
ENSPVAG00000005689	POLR1C	99	66.189	ENSAPEG00000002433	polr1c	99	66.189	Amphiprion_percula
ENSPVAG00000005689	POLR1C	99	69.341	ENSATEG00000005985	polr1c	99	69.341	Anabas_testudineus
ENSPVAG00000005689	POLR1C	87	74.000	ENSAPLG00000002908	POLR1C	100	74.000	Anas_platyrhynchos
ENSPVAG00000005689	POLR1C	89	74.919	ENSACAG00000009764	POLR1C	88	74.919	Anolis_carolinensis
ENSPVAG00000005689	POLR1C	100	87.283	ENSANAG00000025805	POLR1C	99	87.283	Aotus_nancymaae
ENSPVAG00000005689	POLR1C	99	67.143	ENSACLG00000006573	polr1c	98	67.442	Astatotilapia_calliptera
ENSPVAG00000005689	POLR1C	99	66.377	ENSAMXG00000012062	polr1c	99	66.377	Astyanax_mexicanus
ENSPVAG00000005689	POLR1C	100	87.861	ENSBTAG00000018969	POLR1C	100	87.861	Bos_taurus
ENSPVAG00000005689	POLR1C	97	43.343	WBGene00019275	rpac-40	94	43.343	Caenorhabditis_elegans
ENSPVAG00000005689	POLR1C	100	86.705	ENSCJAG00000005594	POLR1C	100	86.705	Callithrix_jacchus
ENSPVAG00000005689	POLR1C	100	87.572	ENSCAFG00000001872	POLR1C	100	87.572	Canis_familiaris
ENSPVAG00000005689	POLR1C	100	87.572	ENSCAFG00020012018	POLR1C	100	87.572	Canis_lupus_dingo
ENSPVAG00000005689	POLR1C	100	87.608	ENSCHIG00000004352	POLR1C	100	87.608	Capra_hircus
ENSPVAG00000005689	POLR1C	100	88.150	ENSTSYG00000011921	POLR1C	100	88.150	Carlito_syrichta
ENSPVAG00000005689	POLR1C	86	85.953	ENSCAPG00000015364	POLR1C	88	85.953	Cavia_aperea
ENSPVAG00000005689	POLR1C	100	87.283	ENSCPOG00000038098	POLR1C	100	87.283	Cavia_porcellus
ENSPVAG00000005689	POLR1C	100	87.283	ENSCCAG00000020169	POLR1C	100	87.283	Cebus_capucinus
ENSPVAG00000005689	POLR1C	100	87.572	ENSCATG00000044045	POLR1C	100	87.572	Cercocebus_atys
ENSPVAG00000005689	POLR1C	100	87.572	ENSCLAG00000009266	POLR1C	100	87.572	Chinchilla_lanigera
ENSPVAG00000005689	POLR1C	100	86.994	ENSCSAG00000011913	POLR1C	100	86.994	Chlorocebus_sabaeus
ENSPVAG00000005689	POLR1C	54	96.774	ENSCHOG00000006601	POLR1C	88	96.774	Choloepus_hoffmanni
ENSPVAG00000005689	POLR1C	100	76.879	ENSCPBG00000025203	POLR1C	100	76.879	Chrysemys_picta_bellii
ENSPVAG00000005689	POLR1C	98	49.853	ENSCING00000003563	-	98	49.853	Ciona_intestinalis
ENSPVAG00000005689	POLR1C	100	86.994	ENSCANG00000043167	POLR1C	100	86.994	Colobus_angolensis_palliatus
ENSPVAG00000005689	POLR1C	100	86.127	ENSCGRG00001017533	Polr1c	100	86.127	Cricetulus_griseus_chok1gshd
ENSPVAG00000005689	POLR1C	86	84.615	ENSCGRG00000013225	Polr1c	100	84.615	Cricetulus_griseus_crigri
ENSPVAG00000005689	POLR1C	100	67.147	ENSCSEG00000018097	polr1c	100	67.147	Cynoglossus_semilaevis
ENSPVAG00000005689	POLR1C	54	72.581	ENSCVAG00000005684	polr1c	74	72.581	Cyprinodon_variegatus
ENSPVAG00000005689	POLR1C	100	65.130	ENSDARG00000039400	polr1c	96	65.130	Danio_rerio
ENSPVAG00000005689	POLR1C	100	86.705	ENSDNOG00000042693	POLR1C	100	86.705	Dasypus_novemcinctus
ENSPVAG00000005689	POLR1C	100	86.416	ENSDORG00000000429	Polr1c	100	86.416	Dipodomys_ordii
ENSPVAG00000005689	POLR1C	90	49.045	FBgn0031657	CG3756	93	49.045	Drosophila_melanogaster
ENSPVAG00000005689	POLR1C	100	82.659	ENSETEG00000010807	POLR1C	100	82.659	Echinops_telfairi
ENSPVAG00000005689	POLR1C	99	66.959	ENSEBUG00000013725	polr1c	98	66.959	Eptatretus_burgeri
ENSPVAG00000005689	POLR1C	100	87.283	ENSEASG00005003338	POLR1C	100	87.283	Equus_asinus_asinus
ENSPVAG00000005689	POLR1C	100	87.283	ENSECAG00000023516	POLR1C	98	87.283	Equus_caballus
ENSPVAG00000005689	POLR1C	100	87.861	ENSEEUG00000005471	POLR1C	100	87.861	Erinaceus_europaeus
ENSPVAG00000005689	POLR1C	100	66.282	ENSELUG00000013027	polr1c	100	66.282	Esox_lucius
ENSPVAG00000005689	POLR1C	100	87.572	ENSFCAG00000009735	POLR1C	100	87.572	Felis_catus
ENSPVAG00000005689	POLR1C	93	74.923	ENSFALG00000012111	POLR1C	100	74.923	Ficedula_albicollis
ENSPVAG00000005689	POLR1C	100	86.705	ENSFDAG00000008428	POLR1C	100	86.705	Fukomys_damarensis
ENSPVAG00000005689	POLR1C	100	56.772	ENSFHEG00000000262	polr1c	100	57.061	Fundulus_heteroclitus
ENSPVAG00000005689	POLR1C	93	65.741	ENSGMOG00000013878	polr1c	100	65.741	Gadus_morhua
ENSPVAG00000005689	POLR1C	100	75.434	ENSGALG00000010349	POLR1C	100	75.434	Gallus_gallus
ENSPVAG00000005689	POLR1C	100	66.952	ENSGAFG00000010153	polr1c	100	66.952	Gambusia_affinis
ENSPVAG00000005689	POLR1C	98	65.988	ENSGACG00000002453	polr1c	98	65.988	Gasterosteus_aculeatus
ENSPVAG00000005689	POLR1C	100	76.879	ENSGAGG00000010640	POLR1C	100	76.879	Gopherus_agassizii
ENSPVAG00000005689	POLR1C	100	88.150	ENSGGOG00000010903	POLR1C	100	88.150	Gorilla_gorilla
ENSPVAG00000005689	POLR1C	99	60.116	ENSHBUG00000017816	polr1c	99	60.116	Haplochromis_burtoni
ENSPVAG00000005689	POLR1C	100	85.838	ENSHGLG00000019441	POLR1C	100	85.838	Heterocephalus_glaber_female
ENSPVAG00000005689	POLR1C	100	85.838	ENSHGLG00100005970	POLR1C	100	85.838	Heterocephalus_glaber_male
ENSPVAG00000005689	POLR1C	99	64.451	ENSHCOG00000002179	polr1c	99	64.451	Hippocampus_comes
ENSPVAG00000005689	POLR1C	98	68.047	ENSIPUG00000024464	polr1c	97	68.047	Ictalurus_punctatus
ENSPVAG00000005689	POLR1C	100	87.572	ENSSTOG00000010631	POLR1C	100	87.572	Ictidomys_tridecemlineatus
ENSPVAG00000005689	POLR1C	50	30.814	ENSSTOG00000031354	-	60	30.814	Ictidomys_tridecemlineatus
ENSPVAG00000005689	POLR1C	100	86.416	ENSJJAG00000023110	Polr1c	100	86.416	Jaculus_jaculus
ENSPVAG00000005689	POLR1C	100	67.236	ENSKMAG00000014305	polr1c	97	67.236	Kryptolebias_marmoratus
ENSPVAG00000005689	POLR1C	100	66.097	ENSLBEG00000014925	polr1c	100	66.097	Labrus_bergylta
ENSPVAG00000005689	POLR1C	95	55.120	ENSLACG00000012567	POLR1C	98	55.120	Latimeria_chalumnae
ENSPVAG00000005689	POLR1C	100	69.164	ENSLOCG00000016710	polr1c	96	69.164	Lepisosteus_oculatus
ENSPVAG00000005689	POLR1C	87	86.047	ENSLAFG00000026248	POLR1C	100	86.047	Loxodonta_africana
ENSPVAG00000005689	POLR1C	100	87.572	ENSMFAG00000046295	POLR1C	100	87.572	Macaca_fascicularis
ENSPVAG00000005689	POLR1C	100	87.572	ENSMMUG00000015192	POLR1C	100	87.572	Macaca_mulatta
ENSPVAG00000005689	POLR1C	100	87.572	ENSMNEG00000028073	POLR1C	100	87.572	Macaca_nemestrina
ENSPVAG00000005689	POLR1C	100	87.283	ENSMLEG00000034818	POLR1C	100	87.283	Mandrillus_leucophaeus
ENSPVAG00000005689	POLR1C	99	66.476	ENSMAMG00000008700	polr1c	99	66.476	Mastacembelus_armatus
ENSPVAG00000005689	POLR1C	99	66.857	ENSMZEG00005018545	polr1c	99	66.857	Maylandia_zebra
ENSPVAG00000005689	POLR1C	84	69.759	ENSMGAG00000011020	POLR1C	100	69.759	Meleagris_gallopavo
ENSPVAG00000005689	POLR1C	100	85.838	ENSMAUG00000014329	Polr1c	100	85.838	Mesocricetus_auratus
ENSPVAG00000005689	POLR1C	100	86.127	ENSMICG00000005027	POLR1C	100	86.127	Microcebus_murinus
ENSPVAG00000005689	POLR1C	100	86.416	ENSMOCG00000017549	Polr1c	100	86.416	Microtus_ochrogaster
ENSPVAG00000005689	POLR1C	99	54.360	ENSMMOG00000005380	polr1c	99	54.651	Mola_mola
ENSPVAG00000005689	POLR1C	84	80.069	ENSMODG00000018964	POLR1C	100	80.069	Monodelphis_domestica
ENSPVAG00000005689	POLR1C	99	56.232	ENSMALG00000011711	polr1c	99	56.522	Monopterus_albus
ENSPVAG00000005689	POLR1C	100	75.145	MGP_CAROLIEiJ_G0021662	Polr1c	100	82.308	Mus_caroli
ENSPVAG00000005689	POLR1C	100	84.104	ENSMUSG00000067148	Polr1c	99	91.176	Mus_musculus
ENSPVAG00000005689	POLR1C	100	83.526	MGP_PahariEiJ_G0020654	Polr1c	99	92.157	Mus_pahari
ENSPVAG00000005689	POLR1C	100	84.393	MGP_SPRETEiJ_G0022574	Polr1c	99	91.176	Mus_spretus
ENSPVAG00000005689	POLR1C	100	87.283	ENSMPUG00000012916	POLR1C	91	87.283	Mustela_putorius_furo
ENSPVAG00000005689	POLR1C	100	89.017	ENSMLUG00000017751	POLR1C	99	89.017	Myotis_lucifugus
ENSPVAG00000005689	POLR1C	100	85.838	ENSNGAG00000023487	Polr1c	100	85.838	Nannospalax_galili
ENSPVAG00000005689	POLR1C	99	66.762	ENSNBRG00000018742	polr1c	99	66.762	Neolamprologus_brichardi
ENSPVAG00000005689	POLR1C	100	87.572	ENSNLEG00000004035	POLR1C	100	87.572	Nomascus_leucogenys
ENSPVAG00000005689	POLR1C	100	69.364	ENSMEUG00000006778	POLR1C	100	69.364	Notamacropus_eugenii
ENSPVAG00000005689	POLR1C	77	82.090	ENSOPRG00000000145	POLR1C	100	82.090	Ochotona_princeps
ENSPVAG00000005689	POLR1C	55	35.938	ENSOPRG00000006979	POLR2C	67	35.938	Ochotona_princeps
ENSPVAG00000005689	POLR1C	100	85.260	ENSODEG00000015831	-	100	85.260	Octodon_degus
ENSPVAG00000005689	POLR1C	54	93.548	ENSODEG00000017109	-	85	93.548	Octodon_degus
ENSPVAG00000005689	POLR1C	99	67.049	ENSONIG00000013133	polr1c	98	67.049	Oreochromis_niloticus
ENSPVAG00000005689	POLR1C	100	77.457	ENSOANG00000003043	POLR1C	100	77.457	Ornithorhynchus_anatinus
ENSPVAG00000005689	POLR1C	100	87.572	ENSOCUG00000005504	POLR1C	99	87.572	Oryctolagus_cuniculus
ENSPVAG00000005689	POLR1C	99	64.928	ENSORLG00000019743	polr1c	98	64.928	Oryzias_latipes
ENSPVAG00000005689	POLR1C	65	52.838	ENSORLG00020005555	polr1c	68	52.838	Oryzias_latipes_hni
ENSPVAG00000005689	POLR1C	99	65.217	ENSORLG00020006489	POLR1C	98	65.217	Oryzias_latipes_hni
ENSPVAG00000005689	POLR1C	99	64.928	ENSORLG00015013322	polr1c	98	64.928	Oryzias_latipes_hsok
ENSPVAG00000005689	POLR1C	99	66.087	ENSOMEG00000016527	polr1c	98	66.087	Oryzias_melastigma
ENSPVAG00000005689	POLR1C	100	84.770	ENSOGAG00000016318	POLR1C	100	84.770	Otolemur_garnettii
ENSPVAG00000005689	POLR1C	100	87.861	ENSOARG00000007503	POLR1C	100	87.861	Ovis_aries
ENSPVAG00000005689	POLR1C	100	88.150	ENSPPAG00000043678	POLR1C	100	88.150	Pan_paniscus
ENSPVAG00000005689	POLR1C	100	87.861	ENSPPRG00000009760	POLR1C	100	87.861	Panthera_pardus
ENSPVAG00000005689	POLR1C	100	87.861	ENSPTIG00000014813	POLR1C	100	87.861	Panthera_tigris_altaica
ENSPVAG00000005689	POLR1C	100	88.150	ENSPTRG00000018202	POLR1C	100	88.150	Pan_troglodytes
ENSPVAG00000005689	POLR1C	100	87.572	ENSPANG00000009025	POLR1C	99	87.572	Papio_anubis
ENSPVAG00000005689	POLR1C	100	68.300	ENSPKIG00000009858	polr1c	100	68.300	Paramormyrops_kingsleyae
ENSPVAG00000005689	POLR1C	100	75.434	ENSPSIG00000012580	POLR1C	94	75.434	Pelodiscus_sinensis
ENSPVAG00000005689	POLR1C	99	55.072	ENSPMGG00000012121	polr1c	99	55.362	Periophthalmus_magnuspinnatus
ENSPVAG00000005689	POLR1C	100	86.127	ENSPEMG00000006970	Polr1c	100	86.127	Peromyscus_maniculatus_bairdii
ENSPVAG00000005689	POLR1C	99	64.655	ENSPMAG00000005560	polr1c	99	64.655	Petromyzon_marinus
ENSPVAG00000005689	POLR1C	55	30.049	ENSPMAG00000004827	polr2c	81	30.049	Petromyzon_marinus
ENSPVAG00000005689	POLR1C	100	81.503	ENSPCIG00000028137	POLR1C	98	81.503	Phascolarctos_cinereus
ENSPVAG00000005689	POLR1C	100	67.521	ENSPFOG00000014357	polr1c	98	67.521	Poecilia_formosa
ENSPVAG00000005689	POLR1C	100	67.521	ENSPFOG00000014342	POLR1C	100	67.521	Poecilia_formosa
ENSPVAG00000005689	POLR1C	54	72.581	ENSPLAG00000004111	polr1c	78	72.581	Poecilia_latipinna
ENSPVAG00000005689	POLR1C	100	67.521	ENSPMEG00000011877	-	100	67.521	Poecilia_mexicana
ENSPVAG00000005689	POLR1C	100	67.521	ENSPMEG00000008420	polr1c	100	67.521	Poecilia_mexicana
ENSPVAG00000005689	POLR1C	100	68.588	ENSPREG00000007985	polr1c	100	68.588	Poecilia_reticulata
ENSPVAG00000005689	POLR1C	100	87.861	ENSPPYG00000016645	POLR1C	100	87.861	Pongo_abelii
ENSPVAG00000005689	POLR1C	100	86.416	ENSPCOG00000024628	POLR1C	100	86.416	Propithecus_coquereli
ENSPVAG00000005689	POLR1C	100	67.236	ENSPNYG00000003620	polr1c	100	67.236	Pundamilia_nyererei
ENSPVAG00000005689	POLR1C	99	66.957	ENSPNAG00000008443	polr1c	99	66.957	Pygocentrus_nattereri
ENSPVAG00000005689	POLR1C	100	84.971	ENSRNOG00000019079	Polr1c	100	84.971	Rattus_norvegicus
ENSPVAG00000005689	POLR1C	100	86.994	ENSRBIG00000007155	POLR1C	100	86.994	Rhinopithecus_bieti
ENSPVAG00000005689	POLR1C	100	87.283	ENSRROG00000000257	POLR1C	100	87.283	Rhinopithecus_roxellana
ENSPVAG00000005689	POLR1C	93	41.590	YPR110C	RPC40	97	41.590	Saccharomyces_cerevisiae
ENSPVAG00000005689	POLR1C	100	87.572	ENSSBOG00000025735	POLR1C	99	86.319	Saimiri_boliviensis_boliviensis
ENSPVAG00000005689	POLR1C	100	73.121	ENSSHAG00000014456	POLR1C	100	73.121	Sarcophilus_harrisii
ENSPVAG00000005689	POLR1C	99	67.536	ENSSFOG00015019860	polr1c	99	67.536	Scleropages_formosus
ENSPVAG00000005689	POLR1C	99	67.826	ENSSMAG00000018865	polr1c	99	67.826	Scophthalmus_maximus
ENSPVAG00000005689	POLR1C	99	67.335	ENSSDUG00000015745	polr1c	91	67.335	Seriola_dumerili
ENSPVAG00000005689	POLR1C	58	33.871	ENSSDUG00000003354	polr2c	66	33.871	Seriola_dumerili
ENSPVAG00000005689	POLR1C	99	67.049	ENSSLDG00000018285	polr1c	91	67.049	Seriola_lalandi_dorsalis
ENSPVAG00000005689	POLR1C	99	73.547	ENSSPUG00000011822	POLR1C	99	73.547	Sphenodon_punctatus
ENSPVAG00000005689	POLR1C	99	67.335	ENSSPAG00000022369	polr1c	99	67.335	Stegastes_partitus
ENSPVAG00000005689	POLR1C	60	36.765	ENSSPAG00000005108	polr2c	65	36.765	Stegastes_partitus
ENSPVAG00000005689	POLR1C	100	87.572	ENSSSCG00000028007	POLR1C	99	87.572	Sus_scrofa
ENSPVAG00000005689	POLR1C	97	75.522	ENSTGUG00000009159	POLR1C	99	75.522	Taeniopygia_guttata
ENSPVAG00000005689	POLR1C	99	64.080	ENSTRUG00000006264	polr1c	99	64.080	Takifugu_rubripes
ENSPVAG00000005689	POLR1C	51	98.876	ENSTBEG00000002254	POLR1C	100	98.876	Tupaia_belangeri
ENSPVAG00000005689	POLR1C	76	82.510	ENSTTRG00000006344	POLR1C	76	82.510	Tursiops_truncatus
ENSPVAG00000005689	POLR1C	100	87.283	ENSUAMG00000025602	POLR1C	100	87.283	Ursus_americanus
ENSPVAG00000005689	POLR1C	100	87.283	ENSUMAG00000005938	POLR1C	100	87.283	Ursus_maritimus
ENSPVAG00000005689	POLR1C	100	84.393	ENSVVUG00000028922	POLR1C	100	84.393	Vulpes_vulpes
ENSPVAG00000005689	POLR1C	100	69.741	ENSXETG00000010882	polr1c	100	69.741	Xenopus_tropicalis
ENSPVAG00000005689	POLR1C	100	68.103	ENSXCOG00000014185	polr1c	100	68.103	Xiphophorus_couchianus
ENSPVAG00000005689	POLR1C	100	67.521	ENSXMAG00000015076	polr1c	100	67.521	Xiphophorus_maculatus