EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000005836 (Gene tree)
Gene ID: -
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 27126 bases
Position: chrGeneScaffold_2445:246871-273996
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000005521	PWI	PF01480.17	3.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000005837	SRRM1-201	2742	-	ENSPVAP00000005521	913 (aa)	-	UPI00018B4B22

Gene Model

Click here to download ENSPVAG00000005836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000005836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000005836	SRRM1	100	98.138	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSPVAG00000005836	SRRM1	100	98.248	ENSAMEG00000010075	SRRM1	100	98.248	Ailuropoda_melanoleuca
ENSPVAG00000005836	SRRM1	60	64.646	ENSAPLG00000002066	SRRM1	59	76.157	Anas_platyrhynchos
ENSPVAG00000005836	SRRM1	100	97.603	ENSANAG00000035606	SRRM1	100	97.603	Aotus_nancymaae
ENSPVAG00000005836	SRRM1	100	97.168	ENSBTAG00000013772	SRRM1	100	97.168	Bos_taurus
ENSPVAG00000005836	SRRM1	100	97.590	ENSCJAG00000020822	SRRM1	100	97.590	Callithrix_jacchus
ENSPVAG00000005836	SRRM1	100	96.187	ENSCAFG00020020948	SRRM1	100	96.187	Canis_lupus_dingo
ENSPVAG00000005836	SRRM1	100	95.548	ENSCHIG00000014656	SRRM1	100	95.548	Capra_hircus
ENSPVAG00000005836	SRRM1	100	97.919	ENSTSYG00000006782	SRRM1	100	97.919	Carlito_syrichta
ENSPVAG00000005836	SRRM1	99	93.963	ENSCAPG00000011473	SRRM1	100	93.963	Cavia_aperea
ENSPVAG00000005836	SRRM1	100	93.573	ENSCPOG00000015594	SRRM1	100	93.573	Cavia_porcellus
ENSPVAG00000005836	SRRM1	100	98.028	ENSCCAG00000029474	SRRM1	100	98.028	Cebus_capucinus
ENSPVAG00000005836	SRRM1	100	97.168	ENSCATG00000031303	SRRM1	100	97.168	Cercocebus_atys
ENSPVAG00000005836	SRRM1	100	95.861	ENSCLAG00000014592	SRRM1	100	95.861	Chinchilla_lanigera
ENSPVAG00000005836	SRRM1	72	98.592	ENSCHOG00000000027	SRRM1	73	98.592	Choloepus_hoffmanni
ENSPVAG00000005836	SRRM1	100	97.809	ENSCANG00000028271	SRRM1	100	97.809	Colobus_angolensis_palliatus
ENSPVAG00000005836	SRRM1	98	92.000	ENSDNOG00000049141	SRRM1	99	92.000	Dasypus_novemcinctus
ENSPVAG00000005836	SRRM1	100	97.059	ENSEASG00005004270	SRRM1	100	97.059	Equus_asinus_asinus
ENSPVAG00000005836	SRRM1	100	97.168	ENSECAG00000026981	SRRM1	100	97.168	Equus_caballus
ENSPVAG00000005836	SRRM1	100	98.467	ENSFCAG00000000678	-	100	98.467	Felis_catus
ENSPVAG00000005836	SRRM1	100	96.623	ENSFDAG00000009903	SRRM1	100	96.623	Fukomys_damarensis
ENSPVAG00000005836	SRRM1	100	98.028	ENSGGOG00000005209	SRRM1	100	98.028	Gorilla_gorilla
ENSPVAG00000005836	SRRM1	100	96.732	ENSHGLG00000017105	SRRM1	100	96.732	Heterocephalus_glaber_female
ENSPVAG00000005836	SRRM1	99	94.858	ENSHGLG00100016772	SRRM1	99	94.858	Heterocephalus_glaber_male
ENSPVAG00000005836	SRRM1	100	97.712	ENSSTOG00000014640	SRRM1	100	97.712	Ictidomys_tridecemlineatus
ENSPVAG00000005836	SRRM1	100	94.804	ENSLAFG00000013830	SRRM1	100	94.804	Loxodonta_africana
ENSPVAG00000005836	SRRM1	100	97.277	ENSMFAG00000025726	SRRM1	100	97.277	Macaca_fascicularis
ENSPVAG00000005836	SRRM1	99	96.937	ENSMMUG00000006645	SRRM1	99	96.937	Macaca_mulatta
ENSPVAG00000005836	SRRM1	100	97.168	ENSMNEG00000039415	SRRM1	100	97.168	Macaca_nemestrina
ENSPVAG00000005836	SRRM1	54	96.806	ENSMLEG00000038030	-	100	91.676	Mandrillus_leucophaeus
ENSPVAG00000005836	SRRM1	100	97.495	ENSMICG00000006553	SRRM1	100	97.495	Microcebus_murinus
ENSPVAG00000005836	SRRM1	59	96.761	MGP_CAROLIEiJ_G0026636	Srrm1	100	85.526	Mus_caroli
ENSPVAG00000005836	SRRM1	59	96.761	ENSMUSG00000028809	Srrm1	100	85.526	Mus_musculus
ENSPVAG00000005836	SRRM1	59	97.166	MGP_PahariEiJ_G0028969	Srrm1	100	85.526	Mus_pahari
ENSPVAG00000005836	SRRM1	59	96.761	MGP_SPRETEiJ_G0027616	Srrm1	100	85.526	Mus_spretus
ENSPVAG00000005836	SRRM1	100	98.138	ENSNLEG00000008966	SRRM1	100	98.138	Nomascus_leucogenys
ENSPVAG00000005836	SRRM1	56	81.445	ENSMEUG00000014704	SRRM1	57	89.683	Notamacropus_eugenii
ENSPVAG00000005836	SRRM1	100	96.834	ENSOCUG00000008438	SRRM1	100	96.834	Oryctolagus_cuniculus
ENSPVAG00000005836	SRRM1	100	96.732	ENSOGAG00000010210	SRRM1	100	96.732	Otolemur_garnettii
ENSPVAG00000005836	SRRM1	92	97.052	ENSOARG00000006453	SRRM1	99	97.052	Ovis_aries
ENSPVAG00000005836	SRRM1	100	98.028	ENSPPAG00000043918	SRRM1	100	98.028	Pan_paniscus
ENSPVAG00000005836	SRRM1	100	98.467	ENSPPRG00000002509	SRRM1	100	98.467	Panthera_pardus
ENSPVAG00000005836	SRRM1	100	93.005	ENSPTIG00000008778	-	100	93.005	Panthera_tigris_altaica
ENSPVAG00000005836	SRRM1	100	97.603	ENSPTRG00000000349	SRRM1	100	97.603	Pan_troglodytes
ENSPVAG00000005836	SRRM1	100	96.078	ENSPANG00000010194	SRRM1	100	96.078	Papio_anubis
ENSPVAG00000005836	SRRM1	100	97.921	ENSPPYG00000001716	SRRM1	100	97.921	Pongo_abelii
ENSPVAG00000005836	SRRM1	91	81.892	ENSPCAG00000015138	SRRM1	91	81.892	Procavia_capensis
ENSPVAG00000005836	SRRM1	100	97.812	ENSPCOG00000021311	SRRM1	100	97.812	Propithecus_coquereli
ENSPVAG00000005836	SRRM1	99	91.898	ENSRBIG00000035461	SRRM1	99	91.898	Rhinopithecus_bieti
ENSPVAG00000005836	SRRM1	100	97.809	ENSRROG00000035151	SRRM1	100	97.809	Rhinopithecus_roxellana
ENSPVAG00000005836	SRRM1	100	96.714	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSPVAG00000005836	SRRM1	60	95.410	ENSSARG00000013718	SRRM1	60	95.410	Sorex_araneus
ENSPVAG00000005836	SRRM1	60	71.355	ENSSPUG00000015890	SRRM1	57	82.472	Sphenodon_punctatus
ENSPVAG00000005836	SRRM1	99	97.695	ENSSSCG00000032947	SRRM1	100	97.611	Sus_scrofa
ENSPVAG00000005836	SRRM1	100	97.481	ENSTBEG00000000100	SRRM1	100	97.481	Tupaia_belangeri
ENSPVAG00000005836	SRRM1	99	97.351	ENSTTRG00000009365	SRRM1	100	97.351	Tursiops_truncatus
ENSPVAG00000005836	SRRM1	88	96.301	ENSUMAG00000013121	SRRM1	95	96.301	Ursus_maritimus
ENSPVAG00000005836	SRRM1	99	93.289	ENSVVUG00000026966	SRRM1	97	93.289	Vulpes_vulpes