EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000005860 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 29649 bases
Position: chrGeneScaffold_3932:31374-61022
Accession: 30859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000005544	ResIII	PF04851.15	8.9e-22	1	2
ENSPVAP00000005544	ResIII	PF04851.15	8.9e-22	2	2
ENSPVAP00000005544	DEAD	PF00270.29	1.5e-48	1	2
ENSPVAP00000005544	DEAD	PF00270.29	1.5e-48	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000005861	SNRNP200-201	6300	-	ENSPVAP00000005544	2099 (aa)	-	UPI00018B200A

Gene Model

Click here to download ENSPVAG00000005860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000005860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000005860	SNRNP200	74	43.111	ENSPVAG00000012827	ASCC3	75	43.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000005860	SNRNP200	93	100.000	ENSG00000144028	SNRNP200	99	98.296	Homo_sapiens
ENSPVAG00000005860	SNRNP200	92	91.546	ENSAPOG00000010223	snrnp200	96	91.300	Acanthochromis_polyacanthus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSAMEG00000008996	SNRNP200	96	100.000	Ailuropoda_melanoleuca
ENSPVAG00000005860	SNRNP200	89	90.921	ENSACIG00000001764	snrnp200	93	91.041	Amphilophus_citrinellus
ENSPVAG00000005860	SNRNP200	92	91.649	ENSAOCG00000024593	snrnp200	96	91.402	Amphiprion_ocellaris
ENSPVAG00000005860	SNRNP200	89	91.184	ENSAPEG00000012554	snrnp200	95	91.304	Amphiprion_percula
ENSPVAG00000005860	SNRNP200	92	91.031	ENSATEG00000022522	snrnp200	96	90.788	Anabas_testudineus
ENSPVAG00000005860	SNRNP200	91	99.283	ENSAPLG00000004313	SNRNP200	96	99.283	Anas_platyrhynchos
ENSPVAG00000005860	SNRNP200	92	99.660	ENSACAG00000000434	SNRNP200	95	99.660	Anolis_carolinensis
ENSPVAG00000005860	SNRNP200	93	97.556	ENSANAG00000036625	SNRNP200	96	97.556	Aotus_nancymaae
ENSPVAG00000005860	SNRNP200	92	90.825	ENSACLG00000011188	snrnp200	96	90.583	Astatotilapia_calliptera
ENSPVAG00000005860	SNRNP200	92	91.443	ENSAMXG00000005684	snrnp200	96	91.198	Astyanax_mexicanus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSBTAG00000000848	SNRNP200	96	100.000	Bos_taurus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSCJAG00000007514	SNRNP200	96	100.000	Callithrix_jacchus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSCAFG00020019979	SNRNP200	100	98.362	Canis_lupus_dingo
ENSPVAG00000005860	SNRNP200	93	100.000	ENSCHIG00000020611	SNRNP200	96	100.000	Capra_hircus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSTSYG00000010467	SNRNP200	96	100.000	Carlito_syrichta
ENSPVAG00000005860	SNRNP200	92	99.643	ENSCAPG00000017234	SNRNP200	96	99.643	Cavia_aperea
ENSPVAG00000005860	SNRNP200	93	100.000	ENSCPOG00000006776	SNRNP200	96	100.000	Cavia_porcellus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSCCAG00000033962	SNRNP200	96	100.000	Cebus_capucinus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSCATG00000015790	SNRNP200	96	100.000	Cercocebus_atys
ENSPVAG00000005860	SNRNP200	93	100.000	ENSCLAG00000004116	SNRNP200	96	100.000	Chinchilla_lanigera
ENSPVAG00000005860	SNRNP200	93	100.000	ENSCSAG00000017369	SNRNP200	96	100.000	Chlorocebus_sabaeus
ENSPVAG00000005860	SNRNP200	66	100.000	ENSCHOG00000012981	-	54	100.000	Choloepus_hoffmanni
ENSPVAG00000005860	SNRNP200	92	98.980	ENSCPBG00000022571	SNRNP200	99	97.872	Chrysemys_picta_bellii
ENSPVAG00000005860	SNRNP200	93	76.639	ENSCING00000005082	-	96	76.639	Ciona_intestinalis
ENSPVAG00000005860	SNRNP200	93	99.143	ENSCANG00000033932	SNRNP200	96	100.000	Colobus_angolensis_palliatus
ENSPVAG00000005860	SNRNP200	93	99.660	ENSCGRG00001022610	Snrnp200	96	99.660	Cricetulus_griseus_chok1gshd
ENSPVAG00000005860	SNRNP200	93	99.660	ENSCGRG00000016472	Snrnp200	96	99.660	Cricetulus_griseus_crigri
ENSPVAG00000005860	SNRNP200	92	89.969	ENSCSEG00000016399	snrnp200	96	89.969	Cynoglossus_semilaevis
ENSPVAG00000005860	SNRNP200	92	88.095	ENSCVAG00000017631	snrnp200	95	88.095	Cyprinodon_variegatus
ENSPVAG00000005860	SNRNP200	92	90.583	ENSDARG00000077536	snrnp200	96	90.583	Danio_rerio
ENSPVAG00000005860	SNRNP200	93	100.000	ENSDNOG00000011227	SNRNP200	96	100.000	Dasypus_novemcinctus
ENSPVAG00000005860	SNRNP200	93	98.061	ENSDORG00000005861	Snrnp200	96	98.061	Dipodomys_ordii
ENSPVAG00000005860	SNRNP200	91	74.745	FBgn0263599	l(3)72Ab	96	74.745	Drosophila_melanogaster
ENSPVAG00000005860	SNRNP200	86	100.000	ENSETEG00000000162	SNRNP200	70	100.000	Echinops_telfairi
ENSPVAG00000005860	SNRNP200	78	78.689	ENSEBUG00000016524	snrnp200	92	78.689	Eptatretus_burgeri
ENSPVAG00000005860	SNRNP200	93	98.362	ENSEASG00005001884	SNRNP200	96	98.362	Equus_asinus_asinus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSECAG00000019675	SNRNP200	96	100.000	Equus_caballus
ENSPVAG00000005860	SNRNP200	84	100.000	ENSEEUG00000012178	SNRNP200	89	100.000	Erinaceus_europaeus
ENSPVAG00000005860	SNRNP200	92	91.649	ENSELUG00000018948	snrnp200	96	91.402	Esox_lucius
ENSPVAG00000005860	SNRNP200	93	100.000	ENSFCAG00000010699	SNRNP200	96	100.000	Felis_catus
ENSPVAG00000005860	SNRNP200	83	93.961	ENSFALG00000001368	-	88	93.961	Ficedula_albicollis
ENSPVAG00000005860	SNRNP200	93	100.000	ENSFDAG00000004683	SNRNP200	96	100.000	Fukomys_damarensis
ENSPVAG00000005860	SNRNP200	92	90.174	ENSFHEG00000003786	snrnp200	95	90.174	Fundulus_heteroclitus
ENSPVAG00000005860	SNRNP200	92	90.194	ENSGMOG00000004881	snrnp200	95	90.194	Gadus_morhua
ENSPVAG00000005860	SNRNP200	92	90.276	ENSGAFG00000010807	snrnp200	95	90.276	Gambusia_affinis
ENSPVAG00000005860	SNRNP200	92	90.194	ENSGACG00000011474	snrnp200	95	90.194	Gasterosteus_aculeatus
ENSPVAG00000005860	SNRNP200	88	97.087	ENSGAGG00000016069	SNRNP200	97	95.918	Gopherus_agassizii
ENSPVAG00000005860	SNRNP200	93	100.000	ENSGGOG00000005174	SNRNP200	96	100.000	Gorilla_gorilla
ENSPVAG00000005860	SNRNP200	89	89.673	ENSHBUG00000011322	snrnp200	94	89.673	Haplochromis_burtoni
ENSPVAG00000005860	SNRNP200	93	100.000	ENSHGLG00000006654	SNRNP200	96	100.000	Heterocephalus_glaber_female
ENSPVAG00000005860	SNRNP200	93	100.000	ENSHGLG00100018594	SNRNP200	96	100.000	Heterocephalus_glaber_male
ENSPVAG00000005860	SNRNP200	93	100.000	ENSSTOG00000016351	SNRNP200	96	100.000	Ictidomys_tridecemlineatus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSJJAG00000023659	Snrnp200	96	100.000	Jaculus_jaculus
ENSPVAG00000005860	SNRNP200	92	90.481	ENSKMAG00000003665	snrnp200	95	90.481	Kryptolebias_marmoratus
ENSPVAG00000005860	SNRNP200	92	90.072	ENSLBEG00000021585	snrnp200	96	90.072	Labrus_bergylta
ENSPVAG00000005860	SNRNP200	78	93.552	ENSLACG00000000226	SNRNP200	99	93.552	Latimeria_chalumnae
ENSPVAG00000005860	SNRNP200	92	92.631	ENSLOCG00000015198	snrnp200	96	92.631	Lepisosteus_oculatus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSLAFG00000015626	SNRNP200	96	100.000	Loxodonta_africana
ENSPVAG00000005860	SNRNP200	93	100.000	ENSMFAG00000040174	SNRNP200	96	100.000	Macaca_fascicularis
ENSPVAG00000005860	SNRNP200	93	100.000	ENSMMUG00000023261	SNRNP200	96	100.000	Macaca_mulatta
ENSPVAG00000005860	SNRNP200	93	99.660	ENSMNEG00000032398	SNRNP200	96	99.660	Macaca_nemestrina
ENSPVAG00000005860	SNRNP200	93	100.000	ENSMLEG00000019083	SNRNP200	96	100.000	Mandrillus_leucophaeus
ENSPVAG00000005860	SNRNP200	92	90.788	ENSMAMG00000007851	snrnp200	96	90.788	Mastacembelus_armatus
ENSPVAG00000005860	SNRNP200	89	89.673	ENSMZEG00005010787	snrnp200	94	89.673	Maylandia_zebra
ENSPVAG00000005860	SNRNP200	89	98.667	ENSMGAG00000001831	SNRNP200	95	99.091	Meleagris_gallopavo
ENSPVAG00000005860	SNRNP200	93	99.660	ENSMAUG00000011825	Snrnp200	96	99.660	Mesocricetus_auratus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSMICG00000004710	SNRNP200	96	100.000	Microcebus_murinus
ENSPVAG00000005860	SNRNP200	93	98.158	ENSMOCG00000011814	Snrnp200	96	98.158	Microtus_ochrogaster
ENSPVAG00000005860	SNRNP200	92	88.776	ENSMMOG00000014167	snrnp200	95	88.776	Mola_mola
ENSPVAG00000005860	SNRNP200	93	100.000	ENSMODG00000008475	SNRNP200	96	100.000	Monodelphis_domestica
ENSPVAG00000005860	SNRNP200	92	91.237	ENSMALG00000001973	snrnp200	96	90.993	Monopterus_albus
ENSPVAG00000005860	SNRNP200	93	99.320	MGP_CAROLIEiJ_G0024250	Snrnp200	96	99.320	Mus_caroli
ENSPVAG00000005860	SNRNP200	93	99.320	ENSMUSG00000003660	Snrnp200	96	99.320	Mus_musculus
ENSPVAG00000005860	SNRNP200	93	99.320	MGP_PahariEiJ_G0025695	Snrnp200	96	99.320	Mus_pahari
ENSPVAG00000005860	SNRNP200	93	99.320	MGP_SPRETEiJ_G0025170	Snrnp200	96	99.320	Mus_spretus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSMPUG00000008949	SNRNP200	96	100.000	Mustela_putorius_furo
ENSPVAG00000005860	SNRNP200	93	99.324	ENSMLUG00000010493	SNRNP200	96	99.324	Myotis_lucifugus
ENSPVAG00000005860	SNRNP200	92	94.985	ENSMLUG00000027511	-	96	94.985	Myotis_lucifugus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSNGAG00000021993	Snrnp200	96	100.000	Nannospalax_galili
ENSPVAG00000005860	SNRNP200	82	90.789	ENSNBRG00000017960	snrnp200	93	90.909	Neolamprologus_brichardi
ENSPVAG00000005860	SNRNP200	91	98.639	ENSNLEG00000000025	SNRNP200	96	98.639	Nomascus_leucogenys
ENSPVAG00000005860	SNRNP200	93	98.095	ENSMEUG00000010532	SNRNP200	75	98.095	Notamacropus_eugenii
ENSPVAG00000005860	SNRNP200	93	98.260	ENSOPRG00000015464	SNRNP200	96	98.260	Ochotona_princeps
ENSPVAG00000005860	SNRNP200	93	100.000	ENSODEG00000008366	SNRNP200	96	100.000	Octodon_degus
ENSPVAG00000005860	SNRNP200	92	90.825	ENSONIG00000010714	snrnp200	96	90.583	Oreochromis_niloticus
ENSPVAG00000005860	SNRNP200	93	99.320	ENSOCUG00000009864	SNRNP200	96	99.320	Oryctolagus_cuniculus
ENSPVAG00000005860	SNRNP200	93	90.890	ENSORLG00000012286	snrnp200	96	90.890	Oryzias_latipes
ENSPVAG00000005860	SNRNP200	93	90.890	ENSORLG00020004648	snrnp200	96	90.890	Oryzias_latipes_hni
ENSPVAG00000005860	SNRNP200	93	90.890	ENSORLG00015019114	snrnp200	96	90.890	Oryzias_latipes_hsok
ENSPVAG00000005860	SNRNP200	92	91.031	ENSOMEG00000011834	snrnp200	96	90.788	Oryzias_melastigma
ENSPVAG00000005860	SNRNP200	93	100.000	ENSOGAG00000006879	SNRNP200	96	100.000	Otolemur_garnettii
ENSPVAG00000005860	SNRNP200	93	100.000	ENSOARG00000013949	SNRNP200	96	100.000	Ovis_aries
ENSPVAG00000005860	SNRNP200	93	100.000	ENSPPAG00000041559	SNRNP200	96	100.000	Pan_paniscus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSPPRG00000004435	SNRNP200	96	100.000	Panthera_pardus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSPTIG00000006380	SNRNP200	96	100.000	Panthera_tigris_altaica
ENSPVAG00000005860	SNRNP200	93	100.000	ENSPTRG00000012230	SNRNP200	96	100.000	Pan_troglodytes
ENSPVAG00000005860	SNRNP200	93	100.000	ENSPANG00000006017	SNRNP200	96	100.000	Papio_anubis
ENSPVAG00000005860	SNRNP200	92	91.402	ENSPKIG00000014762	snrnp200	96	91.402	Paramormyrops_kingsleyae
ENSPVAG00000005860	SNRNP200	92	98.983	ENSPSIG00000008580	SNRNP200	96	98.983	Pelodiscus_sinensis
ENSPVAG00000005860	SNRNP200	93	100.000	ENSPCIG00000023050	SNRNP200	96	100.000	Phascolarctos_cinereus
ENSPVAG00000005860	SNRNP200	92	90.286	ENSPFOG00000015110	snrnp200	96	90.286	Poecilia_formosa
ENSPVAG00000005860	SNRNP200	89	90.028	ENSPLAG00000006711	snrnp200	94	90.028	Poecilia_latipinna
ENSPVAG00000005860	SNRNP200	89	90.028	ENSPMEG00000021166	snrnp200	94	90.028	Poecilia_mexicana
ENSPVAG00000005860	SNRNP200	92	90.379	ENSPREG00000008875	snrnp200	96	90.379	Poecilia_reticulata
ENSPVAG00000005860	SNRNP200	93	100.000	ENSPPYG00000012068	SNRNP200	96	100.000	Pongo_abelii
ENSPVAG00000005860	SNRNP200	91	98.551	ENSPCAG00000008536	SNRNP200	85	98.551	Procavia_capensis
ENSPVAG00000005860	SNRNP200	93	100.000	ENSPCOG00000024608	SNRNP200	96	100.000	Propithecus_coquereli
ENSPVAG00000005860	SNRNP200	92	89.857	ENSPNYG00000017476	snrnp200	95	89.624	Pundamilia_nyererei
ENSPVAG00000005860	SNRNP200	92	90.481	ENSPNAG00000010998	snrnp200	96	90.481	Pygocentrus_nattereri
ENSPVAG00000005860	SNRNP200	93	99.660	ENSRNOG00000012157	Snrnp200	96	99.660	Rattus_norvegicus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSRBIG00000044690	-	96	100.000	Rhinopithecus_bieti
ENSPVAG00000005860	SNRNP200	93	100.000	ENSRROG00000037952	-	96	100.000	Rhinopithecus_roxellana
ENSPVAG00000005860	SNRNP200	93	100.000	ENSSBOG00000035471	SNRNP200	96	100.000	Saimiri_boliviensis_boliviensis
ENSPVAG00000005860	SNRNP200	89	99.556	ENSSHAG00000000758	SNRNP200	96	99.556	Sarcophilus_harrisii
ENSPVAG00000005860	SNRNP200	92	92.268	ENSSFOG00015018826	snrnp200	96	92.016	Scleropages_formosus
ENSPVAG00000005860	SNRNP200	92	90.825	ENSSMAG00000005463	snrnp200	96	90.583	Scophthalmus_maximus
ENSPVAG00000005860	SNRNP200	92	91.237	ENSSDUG00000021410	snrnp200	96	90.993	Seriola_dumerili
ENSPVAG00000005860	SNRNP200	92	90.928	ENSSLDG00000010884	snrnp200	96	90.686	Seriola_lalandi_dorsalis
ENSPVAG00000005860	SNRNP200	88	99.320	ENSSARG00000010728	SNRNP200	92	99.320	Sorex_araneus
ENSPVAG00000005860	SNRNP200	92	97.959	ENSSPUG00000003726	-	96	97.959	Sphenodon_punctatus
ENSPVAG00000005860	SNRNP200	92	91.340	ENSSPAG00000001842	snrnp200	96	91.095	Stegastes_partitus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSSSCG00000008127	SNRNP200	96	100.000	Sus_scrofa
ENSPVAG00000005860	SNRNP200	90	93.333	ENSTGUG00000014475	-	94	93.333	Taeniopygia_guttata
ENSPVAG00000005860	SNRNP200	92	91.237	ENSTRUG00000001307	snrnp200	96	90.993	Takifugu_rubripes
ENSPVAG00000005860	SNRNP200	92	91.212	ENSTNIG00000004320	snrnp200	95	91.212	Tetraodon_nigroviridis
ENSPVAG00000005860	SNRNP200	75	100.000	ENSTBEG00000003329	-	63	100.000	Tupaia_belangeri
ENSPVAG00000005860	SNRNP200	93	98.299	ENSTTRG00000004983	SNRNP200	96	98.299	Tursiops_truncatus
ENSPVAG00000005860	SNRNP200	71	85.129	ENSUAMG00000008395	-	87	85.129	Ursus_americanus
ENSPVAG00000005860	SNRNP200	93	100.000	ENSUMAG00000012385	SNRNP200	96	100.000	Ursus_maritimus
ENSPVAG00000005860	SNRNP200	80	100.000	ENSVPAG00000006434	SNRNP200	63	100.000	Vicugna_pacos
ENSPVAG00000005860	SNRNP200	93	100.000	ENSVVUG00000026247	SNRNP200	96	100.000	Vulpes_vulpes
ENSPVAG00000005860	SNRNP200	93	94.592	ENSXETG00000001243	snrnp200	96	94.592	Xenopus_tropicalis
ENSPVAG00000005860	SNRNP200	89	90.658	ENSXMAG00000002058	snrnp200	93	90.658	Xiphophorus_maculatus