EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000006098 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 108134 bases
Position: chrGeneScaffold_1229:266496-374629
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000005763	R3H	PF01424.22	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000006098	R3HDM1-201	3312	-	ENSPVAP00000005763	1103 (aa)	-	UPI00018B41DB

Gene Model

Click here to download ENSPVAG00000006098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000006098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000006098	R3HDM1	99	42.743	ENSPVAG00000003967	R3HDM2	100	42.143
ENSPVAG00000006098	R3HDM1	66	44.617	ENSPVAG00000015987	ARPP21	88	44.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000006098	R3HDM1	100	86.038	ENSG00000048991	R3HDM1	99	91.852	Homo_sapiens
ENSPVAG00000006098	R3HDM1	89	41.865	ENSAPOG00000020850	r3hdm1	97	42.169	Acanthochromis_polyacanthus
ENSPVAG00000006098	R3HDM1	100	87.511	ENSAMEG00000014886	R3HDM1	100	87.511	Ailuropoda_melanoleuca
ENSPVAG00000006098	R3HDM1	89	41.667	ENSAOCG00000005192	r3hdm1	99	41.759	Amphiprion_ocellaris
ENSPVAG00000006098	R3HDM1	89	40.931	ENSAPEG00000016108	r3hdm1	99	41.522	Amphiprion_percula
ENSPVAG00000006098	R3HDM1	89	40.286	ENSATEG00000000232	r3hdm1	92	50.672	Anabas_testudineus
ENSPVAG00000006098	R3HDM1	100	70.901	ENSAPLG00000015231	R3HDM1	100	71.081	Anas_platyrhynchos
ENSPVAG00000006098	R3HDM1	100	68.297	ENSACAG00000001676	R3HDM1	100	68.821	Anolis_carolinensis
ENSPVAG00000006098	R3HDM1	100	86.141	ENSANAG00000035334	R3HDM1	100	86.141	Aotus_nancymaae
ENSPVAG00000006098	R3HDM1	79	43.662	ENSACLG00000027282	r3hdm1	94	43.337	Astatotilapia_calliptera
ENSPVAG00000006098	R3HDM1	93	66.427	ENSAMXG00000012861	R3HDM1	100	66.346	Astyanax_mexicanus
ENSPVAG00000006098	R3HDM1	100	49.697	ENSAMXG00000003536	r3hdm1	100	56.512	Astyanax_mexicanus
ENSPVAG00000006098	R3HDM1	100	83.758	ENSBTAG00000013302	R3HDM1	100	83.231	Bos_taurus
ENSPVAG00000006098	R3HDM1	100	85.688	ENSCJAG00000011718	R3HDM1	100	85.688	Callithrix_jacchus
ENSPVAG00000006098	R3HDM1	100	87.783	ENSCAFG00000005075	R3HDM1	100	87.783	Canis_familiaris
ENSPVAG00000006098	R3HDM1	100	87.862	ENSCAFG00020016119	R3HDM1	99	89.687	Canis_lupus_dingo
ENSPVAG00000006098	R3HDM1	100	86.244	ENSCHIG00000020851	R3HDM1	100	86.244	Capra_hircus
ENSPVAG00000006098	R3HDM1	100	81.107	ENSCPOG00000012784	R3HDM1	95	87.140	Cavia_porcellus
ENSPVAG00000006098	R3HDM1	100	85.766	ENSCCAG00000027199	R3HDM1	100	85.766	Cebus_capucinus
ENSPVAG00000006098	R3HDM1	100	91.328	ENSCATG00000023642	R3HDM1	95	91.328	Cercocebus_atys
ENSPVAG00000006098	R3HDM1	100	81.706	ENSCLAG00000007962	R3HDM1	100	81.179	Chinchilla_lanigera
ENSPVAG00000006098	R3HDM1	100	83.216	ENSCSAG00000016356	R3HDM1	100	83.040	Chlorocebus_sabaeus
ENSPVAG00000006098	R3HDM1	78	91.481	ENSCHOG00000013638	R3HDM1	81	91.418	Choloepus_hoffmanni
ENSPVAG00000006098	R3HDM1	78	90.041	ENSCPBG00000009645	R3HDM1	97	90.000	Chrysemys_picta_bellii
ENSPVAG00000006098	R3HDM1	100	85.598	ENSCANG00000034748	R3HDM1	100	85.598	Colobus_angolensis_palliatus
ENSPVAG00000006098	R3HDM1	99	78.390	ENSCGRG00001012357	R3hdm1	97	80.423	Cricetulus_griseus_chok1gshd
ENSPVAG00000006098	R3HDM1	99	82.818	ENSCGRG00000012080	R3hdm1	100	81.728	Cricetulus_griseus_crigri
ENSPVAG00000006098	R3HDM1	89	37.127	ENSCSEG00000008944	r3hdm1	93	40.357	Cynoglossus_semilaevis
ENSPVAG00000006098	R3HDM1	89	43.107	ENSCVAG00000007582	r3hdm1	99	42.468	Cyprinodon_variegatus
ENSPVAG00000006098	R3HDM1	100	81.998	ENSDNOG00000000771	R3HDM1	100	82.088	Dasypus_novemcinctus
ENSPVAG00000006098	R3HDM1	100	81.975	ENSETEG00000013606	R3HDM1	100	82.337	Echinops_telfairi
ENSPVAG00000006098	R3HDM1	100	87.047	ENSEASG00005007392	R3HDM1	100	91.872	Equus_asinus_asinus
ENSPVAG00000006098	R3HDM1	100	87.319	ENSECAG00000019114	R3HDM1	100	91.872	Equus_caballus
ENSPVAG00000006098	R3HDM1	74	94.085	ENSEEUG00000012589	R3HDM1	74	94.085	Erinaceus_europaeus
ENSPVAG00000006098	R3HDM1	89	53.203	ENSELUG00000004909	R3HDM1	99	47.632	Esox_lucius
ENSPVAG00000006098	R3HDM1	77	56.952	ENSELUG00000014413	r3hdm1	86	59.109	Esox_lucius
ENSPVAG00000006098	R3HDM1	100	87.149	ENSFCAG00000027113	R3HDM1	100	92.365	Felis_catus
ENSPVAG00000006098	R3HDM1	88	69.189	ENSFALG00000013731	R3HDM1	84	68.852	Ficedula_albicollis
ENSPVAG00000006098	R3HDM1	100	81.634	ENSFDAG00000016478	R3HDM1	99	88.745	Fukomys_damarensis
ENSPVAG00000006098	R3HDM1	89	40.833	ENSFHEG00000018713	r3hdm1	99	38.561	Fundulus_heteroclitus
ENSPVAG00000006098	R3HDM1	51	61.982	ENSGMOG00000006042	-	66	61.982	Gadus_morhua
ENSPVAG00000006098	R3HDM1	83	76.797	ENSGALG00000012246	R3HDM1	99	76.721	Gallus_gallus
ENSPVAG00000006098	R3HDM1	79	43.333	ENSGAFG00000006203	r3hdm1	94	42.764	Gambusia_affinis
ENSPVAG00000006098	R3HDM1	87	41.942	ENSGACG00000014925	r3hdm1	99	42.308	Gasterosteus_aculeatus
ENSPVAG00000006098	R3HDM1	100	70.370	ENSGAGG00000007840	R3HDM1	100	70.099	Gopherus_agassizii
ENSPVAG00000006098	R3HDM1	100	85.507	ENSGGOG00000008156	R3HDM1	100	85.507	Gorilla_gorilla
ENSPVAG00000006098	R3HDM1	100	81.371	ENSHGLG00000015718	R3HDM1	99	88.561	Heterocephalus_glaber_female
ENSPVAG00000006098	R3HDM1	95	72.131	ENSHGLG00100015374	-	100	72.131	Heterocephalus_glaber_male
ENSPVAG00000006098	R3HDM1	100	81.107	ENSHGLG00100003184	-	93	87.805	Heterocephalus_glaber_male
ENSPVAG00000006098	R3HDM1	79	39.625	ENSHCOG00000013366	r3hdm1	88	53.750	Hippocampus_comes
ENSPVAG00000006098	R3HDM1	81	60.143	ENSIPUG00000001676	R3HDM1	99	49.654	Ictalurus_punctatus
ENSPVAG00000006098	R3HDM1	85	59.760	ENSIPUG00000013629	r3hdm1	83	54.183	Ictalurus_punctatus
ENSPVAG00000006098	R3HDM1	100	85.249	ENSSTOG00000007572	R3HDM1	99	91.144	Ictidomys_tridecemlineatus
ENSPVAG00000006098	R3HDM1	95	63.587	ENSLACG00000005334	R3HDM1	100	63.587	Latimeria_chalumnae
ENSPVAG00000006098	R3HDM1	100	59.805	ENSLOCG00000001641	r3hdm1	100	59.450	Lepisosteus_oculatus
ENSPVAG00000006098	R3HDM1	100	82.895	ENSLAFG00000009065	R3HDM1	99	89.459	Loxodonta_africana
ENSPVAG00000006098	R3HDM1	100	85.688	ENSMFAG00000030331	R3HDM1	100	90.640	Macaca_fascicularis
ENSPVAG00000006098	R3HDM1	100	85.857	ENSMMUG00000009844	R3HDM1	100	85.857	Macaca_mulatta
ENSPVAG00000006098	R3HDM1	100	85.766	ENSMNEG00000027793	R3HDM1	100	90.640	Macaca_nemestrina
ENSPVAG00000006098	R3HDM1	100	85.779	ENSMLEG00000043189	R3HDM1	100	85.779	Mandrillus_leucophaeus
ENSPVAG00000006098	R3HDM1	89	43.145	ENSMAMG00000004532	r3hdm1	92	54.598	Mastacembelus_armatus
ENSPVAG00000006098	R3HDM1	89	43.204	ENSMZEG00005003157	r3hdm1	92	53.817	Maylandia_zebra
ENSPVAG00000006098	R3HDM1	100	70.487	ENSMGAG00000012461	R3HDM1	100	70.578	Meleagris_gallopavo
ENSPVAG00000006098	R3HDM1	100	78.174	ENSMAUG00000010315	R3hdm1	100	81.728	Mesocricetus_auratus
ENSPVAG00000006098	R3HDM1	96	61.248	ENSMICG00000042655	-	100	79.557	Microcebus_murinus
ENSPVAG00000006098	R3HDM1	100	84.539	ENSMICG00000005900	-	100	84.539	Microcebus_murinus
ENSPVAG00000006098	R3HDM1	86	74.532	ENSMODG00000000923	R3HDM1	97	67.537	Monodelphis_domestica
ENSPVAG00000006098	R3HDM1	99	41.197	ENSMALG00000009000	r3hdm1	92	52.762	Monopterus_albus
ENSPVAG00000006098	R3HDM1	100	77.904	MGP_CAROLIEiJ_G0014543	R3hdm1	99	87.823	Mus_caroli
ENSPVAG00000006098	R3HDM1	100	78.303	ENSMUSG00000056211	R3hdm1	99	87.823	Mus_musculus
ENSPVAG00000006098	R3HDM1	100	77.817	MGP_PahariEiJ_G0027779	R3hdm1	99	87.269	Mus_pahari
ENSPVAG00000006098	R3HDM1	100	78.478	MGP_SPRETEiJ_G0015350	R3hdm1	99	88.007	Mus_spretus
ENSPVAG00000006098	R3HDM1	100	87.421	ENSMPUG00000002412	R3HDM1	100	87.511	Mustela_putorius_furo
ENSPVAG00000006098	R3HDM1	100	86.528	ENSMLUG00000013824	R3HDM1	100	86.166	Myotis_lucifugus
ENSPVAG00000006098	R3HDM1	100	85.688	ENSNLEG00000008622	R3HDM1	100	85.688	Nomascus_leucogenys
ENSPVAG00000006098	R3HDM1	81	79.037	ENSMEUG00000011784	R3HDM1	90	79.503	Notamacropus_eugenii
ENSPVAG00000006098	R3HDM1	100	80.719	ENSODEG00000008607	R3HDM1	100	81.395	Octodon_degus
ENSPVAG00000006098	R3HDM1	95	43.103	ENSONIG00000012017	r3hdm1	98	43.094	Oreochromis_niloticus
ENSPVAG00000006098	R3HDM1	91	82.034	ENSOANG00000007987	R3HDM1	100	74.167	Ornithorhynchus_anatinus
ENSPVAG00000006098	R3HDM1	89	83.046	ENSOCUG00000017366	R3HDM1	98	83.350	Oryctolagus_cuniculus
ENSPVAG00000006098	R3HDM1	89	38.469	ENSORLG00000004297	r3hdm1	73	45.070	Oryzias_latipes
ENSPVAG00000006098	R3HDM1	89	40.465	ENSORLG00015017355	r3hdm1	80	44.322	Oryzias_latipes_hsok
ENSPVAG00000006098	R3HDM1	100	84.344	ENSOGAG00000003136	R3HDM1	100	84.253	Otolemur_garnettii
ENSPVAG00000006098	R3HDM1	100	85.973	ENSOARG00000010788	R3HDM1	100	85.973	Ovis_aries
ENSPVAG00000006098	R3HDM1	100	86.141	ENSPPAG00000027858	R3HDM1	100	86.141	Pan_paniscus
ENSPVAG00000006098	R3HDM1	100	86.968	ENSPPRG00000002626	R3HDM1	100	87.059	Panthera_pardus
ENSPVAG00000006098	R3HDM1	100	86.878	ENSPTIG00000016581	R3HDM1	100	86.968	Panthera_tigris_altaica
ENSPVAG00000006098	R3HDM1	100	86.219	ENSPTRG00000012494	R3HDM1	100	86.219	Pan_troglodytes
ENSPVAG00000006098	R3HDM1	100	85.688	ENSPANG00000026448	R3HDM1	100	85.688	Papio_anubis
ENSPVAG00000006098	R3HDM1	84	68.038	ENSPKIG00000004328	r3hdm1	91	68.254	Paramormyrops_kingsleyae
ENSPVAG00000006098	R3HDM1	100	70.397	ENSPSIG00000012915	R3HDM1	95	76.580	Pelodiscus_sinensis
ENSPVAG00000006098	R3HDM1	100	78.515	ENSPEMG00000015187	R3hdm1	100	81.395	Peromyscus_maniculatus_bairdii
ENSPVAG00000006098	R3HDM1	66	48.696	ENSPMAG00000003369	-	72	47.653	Petromyzon_marinus
ENSPVAG00000006098	R3HDM1	100	76.349	ENSPCIG00000002491	R3HDM1	100	84.069	Phascolarctos_cinereus
ENSPVAG00000006098	R3HDM1	89	41.220	ENSPFOG00000015036	r3hdm1	99	40.799	Poecilia_formosa
ENSPVAG00000006098	R3HDM1	79	43.319	ENSPLAG00000018042	r3hdm1	95	43.455	Poecilia_latipinna
ENSPVAG00000006098	R3HDM1	79	43.366	ENSPMEG00000023947	r3hdm1	95	43.408	Poecilia_mexicana
ENSPVAG00000006098	R3HDM1	89	42.212	ENSPREG00000007902	r3hdm1	86	56.731	Poecilia_reticulata
ENSPVAG00000006098	R3HDM1	100	84.873	ENSPPYG00000012815	R3HDM1	100	84.873	Pongo_abelii
ENSPVAG00000006098	R3HDM1	92	84.469	ENSPCAG00000006208	R3HDM1	92	84.469	Procavia_capensis
ENSPVAG00000006098	R3HDM1	100	83.363	ENSPCOG00000012698	R3HDM1	96	98.333	Propithecus_coquereli
ENSPVAG00000006098	R3HDM1	83	67.949	ENSPNAG00000005436	R3HDM1	99	67.846	Pygocentrus_nattereri
ENSPVAG00000006098	R3HDM1	92	53.689	ENSPNAG00000013952	r3hdm1	100	57.377	Pygocentrus_nattereri
ENSPVAG00000006098	R3HDM1	100	78.040	ENSRNOG00000004099	R3hdm1	100	79.174	Rattus_norvegicus
ENSPVAG00000006098	R3HDM1	100	84.964	ENSRBIG00000033317	R3HDM1	96	98.750	Rhinopithecus_bieti
ENSPVAG00000006098	R3HDM1	100	85.947	ENSRROG00000034534	R3HDM1	100	85.947	Rhinopithecus_roxellana
ENSPVAG00000006098	R3HDM1	100	85.507	ENSSBOG00000020389	R3HDM1	100	85.507	Saimiri_boliviensis_boliviensis
ENSPVAG00000006098	R3HDM1	100	76.694	ENSSHAG00000016999	R3HDM1	100	76.784	Sarcophilus_harrisii
ENSPVAG00000006098	R3HDM1	93	64.407	ENSSFOG00015014134	r3hdm1	100	64.320	Scleropages_formosus
ENSPVAG00000006098	R3HDM1	100	50.667	ENSSFOG00015019851	-	96	55.725	Scleropages_formosus
ENSPVAG00000006098	R3HDM1	90	48.926	ENSSMAG00000001669	r3hdm1	99	39.896	Scophthalmus_maximus
ENSPVAG00000006098	R3HDM1	89	41.849	ENSSDUG00000010749	r3hdm1	99	42.830	Seriola_dumerili
ENSPVAG00000006098	R3HDM1	99	42.114	ENSSLDG00000004499	r3hdm1	99	42.398	Seriola_lalandi_dorsalis
ENSPVAG00000006098	R3HDM1	65	74.751	ENSSARG00000000352	-	65	74.751	Sorex_araneus
ENSPVAG00000006098	R3HDM1	100	72.292	ENSSPUG00000004167	R3HDM1	100	71.931	Sphenodon_punctatus
ENSPVAG00000006098	R3HDM1	89	43.947	ENSSPAG00000004648	r3hdm1	99	44.335	Stegastes_partitus
ENSPVAG00000006098	R3HDM1	100	86.878	ENSSSCG00000015692	R3HDM1	100	86.968	Sus_scrofa
ENSPVAG00000006098	R3HDM1	100	65.617	ENSTGUG00000011750	R3HDM1	100	65.347	Taeniopygia_guttata
ENSPVAG00000006098	R3HDM1	79	41.765	ENSTRUG00000011654	r3hdm1	93	41.622	Takifugu_rubripes
ENSPVAG00000006098	R3HDM1	87	41.028	ENSTNIG00000010362	r3hdm1	95	41.288	Tetraodon_nigroviridis
ENSPVAG00000006098	R3HDM1	100	79.076	ENSTTRG00000003935	R3HDM1	100	79.348	Tursiops_truncatus
ENSPVAG00000006098	R3HDM1	70	88.046	ENSUAMG00000024806	R3HDM1	99	90.959	Ursus_americanus
ENSPVAG00000006098	R3HDM1	100	82.880	ENSUMAG00000005552	R3HDM1	100	82.971	Ursus_maritimus
ENSPVAG00000006098	R3HDM1	90	98.246	ENSVPAG00000007333	R3HDM1	90	98.246	Vicugna_pacos
ENSPVAG00000006098	R3HDM1	100	84.169	ENSVVUG00000006457	R3HDM1	100	84.169	Vulpes_vulpes
ENSPVAG00000006098	R3HDM1	89	59.960	ENSXETG00000019330	r3hdm1	100	59.759	Xenopus_tropicalis
ENSPVAG00000006098	R3HDM1	61	46.620	ENSXCOG00000017448	r3hdm1	87	46.023	Xiphophorus_couchianus
ENSPVAG00000006098	R3HDM1	89	41.884	ENSXMAG00000007885	r3hdm1	99	40.354	Xiphophorus_maculatus