EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000006457 (Gene tree)
Gene ID: -
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 23233 bases
Position: chrGeneScaffold_623:29318-52550
Accession: 15818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000006101	RRM_1	PF00076.22	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000006457	RBM38-201	717	-	ENSPVAP00000006101	238 (aa)	-	UPI00018B1965

Gene Model

Click here to download ENSPVAG00000006457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000006457's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000006457	RBM38	100	67.364	ENSG00000132819	RBM38	95	94.521	Homo_sapiens
ENSPVAG00000006457	RBM38	92	38.750	ENSAPOG00000003301	rbm38	76	40.838	Acanthochromis_polyacanthus
ENSPVAG00000006457	RBM38	66	87.097	ENSAPOG00000009939	-	67	87.097	Acanthochromis_polyacanthus
ENSPVAG00000006457	RBM38	66	85.484	ENSACIG00000012502	-	68	85.484	Amphilophus_citrinellus
ENSPVAG00000006457	RBM38	92	38.750	ENSAOCG00000013497	-	76	40.838	Amphiprion_ocellaris
ENSPVAG00000006457	RBM38	99	41.870	ENSAOCG00000012559	RBM38	99	43.802	Amphiprion_ocellaris
ENSPVAG00000006457	RBM38	99	41.564	ENSAPEG00000013137	rbm38	99	40.329	Amphiprion_percula
ENSPVAG00000006457	RBM38	92	41.224	ENSAPEG00000023581	-	96	43.154	Amphiprion_percula
ENSPVAG00000006457	RBM38	93	42.128	ENSATEG00000016366	rbm38	79	42.473	Anabas_testudineus
ENSPVAG00000006457	RBM38	66	85.484	ENSATEG00000016710	-	96	41.909	Anabas_testudineus
ENSPVAG00000006457	RBM38	91	50.909	ENSACAG00000016238	RBM38	90	50.455	Anolis_carolinensis
ENSPVAG00000006457	RBM38	91	63.889	ENSANAG00000031959	RBM38	84	97.260	Aotus_nancymaae
ENSPVAG00000006457	RBM38	66	85.484	ENSACLG00000019514	-	70	85.484	Astatotilapia_calliptera
ENSPVAG00000006457	RBM38	92	44.828	ENSAMXG00000015601	-	96	44.397	Astyanax_mexicanus
ENSPVAG00000006457	RBM38	88	36.036	ENSAMXG00000038120	rbm38	73	39.326	Astyanax_mexicanus
ENSPVAG00000006457	RBM38	100	67.364	ENSBTAG00000008105	RBM38	100	67.364	Bos_taurus
ENSPVAG00000006457	RBM38	100	66.946	ENSCJAG00000019139	RBM38	84	97.260	Callithrix_jacchus
ENSPVAG00000006457	RBM38	100	66.946	ENSCAFG00020021943	RBM38	100	66.946	Canis_lupus_dingo
ENSPVAG00000006457	RBM38	75	96.203	ENSCHIG00000002609	RBM38	74	96.203	Capra_hircus
ENSPVAG00000006457	RBM38	100	67.364	ENSCPOG00000012781	RBM38	100	67.364	Cavia_porcellus
ENSPVAG00000006457	RBM38	100	66.946	ENSCCAG00000036872	RBM38	80	97.260	Cebus_capucinus
ENSPVAG00000006457	RBM38	100	66.946	ENSCATG00000032133	RBM38	100	66.946	Cercocebus_atys
ENSPVAG00000006457	RBM38	96	65.217	ENSCLAG00000005906	RBM38	100	65.217	Chinchilla_lanigera
ENSPVAG00000006457	RBM38	100	66.946	ENSCSAG00000015503	RBM38	100	66.946	Chlorocebus_sabaeus
ENSPVAG00000006457	RBM38	66	92.857	ENSCPBG00000024059	RBM38	100	53.211	Chrysemys_picta_bellii
ENSPVAG00000006457	RBM38	74	75.641	ENSCANG00000030105	-	71	75.641	Colobus_angolensis_palliatus
ENSPVAG00000006457	RBM38	100	63.180	ENSCGRG00001012928	Rbm38	100	63.180	Cricetulus_griseus_chok1gshd
ENSPVAG00000006457	RBM38	89	46.330	ENSCSEG00000004701	-	93	44.444	Cynoglossus_semilaevis
ENSPVAG00000006457	RBM38	89	44.589	ENSCVAG00000005472	-	92	44.589	Cyprinodon_variegatus
ENSPVAG00000006457	RBM38	89	38.197	ENSCVAG00000015952	rbm38	72	40.437	Cyprinodon_variegatus
ENSPVAG00000006457	RBM38	89	41.704	ENSDARG00000058818	rbm38	92	41.704	Danio_rerio
ENSPVAG00000006457	RBM38	91	61.574	ENSDNOG00000032004	RBM38	100	60.648	Dasypus_novemcinctus
ENSPVAG00000006457	RBM38	100	66.109	ENSECAG00000007700	RBM38	100	66.109	Equus_caballus
ENSPVAG00000006457	RBM38	100	65.690	ENSEEUG00000013489	RBM38	100	66.946	Erinaceus_europaeus
ENSPVAG00000006457	RBM38	67	83.871	ENSELUG00000005849	-	69	85.246	Esox_lucius
ENSPVAG00000006457	RBM38	80	40.704	ENSELUG00000000585	-	78	41.667	Esox_lucius
ENSPVAG00000006457	RBM38	100	68.201	ENSFCAG00000042916	RBM38	100	68.201	Felis_catus
ENSPVAG00000006457	RBM38	74	51.977	ENSFALG00000010805	RBM38	99	50.785	Ficedula_albicollis
ENSPVAG00000006457	RBM38	89	38.961	ENSFHEG00000017748	rbm38	72	39.891	Fundulus_heteroclitus
ENSPVAG00000006457	RBM38	62	96.154	ENSFHEG00000006160	-	67	96.154	Fundulus_heteroclitus
ENSPVAG00000006457	RBM38	76	43.407	ENSGMOG00000016655	-	96	46.703	Gadus_morhua
ENSPVAG00000006457	RBM38	91	52.752	ENSGALG00000026081	RBM38	100	52.294	Gallus_gallus
ENSPVAG00000006457	RBM38	62	88.462	ENSGACG00000015224	rbm38	54	88.462	Gasterosteus_aculeatus
ENSPVAG00000006457	RBM38	90	43.694	ENSGACG00000009873	-	100	43.946	Gasterosteus_aculeatus
ENSPVAG00000006457	RBM38	66	92.857	ENSGAGG00000001187	RBM38	100	53.670	Gopherus_agassizii
ENSPVAG00000006457	RBM38	96	39.834	ENSHBUG00000012058	rbm38	82	39.303	Haplochromis_burtoni
ENSPVAG00000006457	RBM38	66	85.484	ENSHBUG00000011778	-	70	85.484	Haplochromis_burtoni
ENSPVAG00000006457	RBM38	100	64.435	ENSHGLG00000015077	RBM38	100	64.435	Heterocephalus_glaber_female
ENSPVAG00000006457	RBM38	80	46.667	ENSHCOG00000005622	-	54	47.917	Hippocampus_comes
ENSPVAG00000006457	RBM38	100	42.188	ENSIPUG00000019349	-	100	40.711	Ictalurus_punctatus
ENSPVAG00000006457	RBM38	89	35.897	ENSKMAG00000012402	rbm38	79	37.097	Kryptolebias_marmoratus
ENSPVAG00000006457	RBM38	66	85.484	ENSLBEG00000016163	RBM38	68	94.231	Labrus_bergylta
ENSPVAG00000006457	RBM38	92	38.589	ENSLBEG00000018878	rbm38	75	40.314	Labrus_bergylta
ENSPVAG00000006457	RBM38	92	46.725	ENSLOCG00000003456	rbm38	96	46.053	Lepisosteus_oculatus
ENSPVAG00000006457	RBM38	98	66.383	ENSMFAG00000043808	RBM38	98	66.383	Macaca_fascicularis
ENSPVAG00000006457	RBM38	100	66.946	ENSMMUG00000031391	RBM38	100	66.946	Macaca_mulatta
ENSPVAG00000006457	RBM38	100	66.946	ENSMNEG00000034683	RBM38	100	66.946	Macaca_nemestrina
ENSPVAG00000006457	RBM38	92	39.004	ENSMAMG00000024135	rbm38	75	40.838	Mastacembelus_armatus
ENSPVAG00000006457	RBM38	66	87.097	ENSMAMG00000020499	RBM38	96	42.500	Mastacembelus_armatus
ENSPVAG00000006457	RBM38	66	85.484	ENSMZEG00005000849	-	70	85.484	Maylandia_zebra
ENSPVAG00000006457	RBM38	92	39.004	ENSMZEG00005026036	rbm38	75	40.314	Maylandia_zebra
ENSPVAG00000006457	RBM38	100	64.017	ENSMAUG00000021211	Rbm38	100	64.017	Mesocricetus_auratus
ENSPVAG00000006457	RBM38	91	64.815	ENSMICG00000038011	RBM38	100	64.815	Microcebus_murinus
ENSPVAG00000006457	RBM38	100	62.762	ENSMOCG00000008715	Rbm38	100	62.762	Microtus_ochrogaster
ENSPVAG00000006457	RBM38	66	85.484	ENSMMOG00000020051	-	70	85.484	Mola_mola
ENSPVAG00000006457	RBM38	100	55.833	ENSMODG00000016458	RBM38	100	55.417	Monodelphis_domestica
ENSPVAG00000006457	RBM38	52	87.097	ENSMALG00000004680	RBM38	71	46.354	Monopterus_albus
ENSPVAG00000006457	RBM38	65	40.506	ENSMALG00000022327	rbm38	68	40.506	Monopterus_albus
ENSPVAG00000006457	RBM38	100	64.435	MGP_CAROLIEiJ_G0024745	Rbm38	90	88.889	Mus_caroli
ENSPVAG00000006457	RBM38	100	64.435	ENSMUSG00000027510	Rbm38	90	88.889	Mus_musculus
ENSPVAG00000006457	RBM38	100	64.017	MGP_PahariEiJ_G0026186	Rbm38	90	90.278	Mus_pahari
ENSPVAG00000006457	RBM38	100	64.017	MGP_SPRETEiJ_G0025665	Rbm38	90	88.889	Mus_spretus
ENSPVAG00000006457	RBM38	77	62.500	ENSMPUG00000006518	RBM38	91	62.500	Mustela_putorius_furo
ENSPVAG00000006457	RBM38	91	63.889	ENSMLUG00000011140	RBM38	100	63.889	Myotis_lucifugus
ENSPVAG00000006457	RBM38	96	40.417	ENSNBRG00000022685	rbm38	83	39.801	Neolamprologus_brichardi
ENSPVAG00000006457	RBM38	66	85.484	ENSNBRG00000022545	-	96	41.909	Neolamprologus_brichardi
ENSPVAG00000006457	RBM38	100	66.527	ENSODEG00000007980	RBM38	100	66.527	Octodon_degus
ENSPVAG00000006457	RBM38	65	85.484	ENSONIG00000020324	-	96	41.667	Oreochromis_niloticus
ENSPVAG00000006457	RBM38	92	39.167	ENSONIG00000017073	rbm38	77	40.838	Oreochromis_niloticus
ENSPVAG00000006457	RBM38	97	51.515	ENSOANG00000009259	RBM38	66	77.333	Ornithorhynchus_anatinus
ENSPVAG00000006457	RBM38	89	37.179	ENSORLG00000012154	rbm38	72	38.798	Oryzias_latipes
ENSPVAG00000006457	RBM38	92	42.975	ENSORLG00000027180	-	96	44.033	Oryzias_latipes
ENSPVAG00000006457	RBM38	92	42.975	ENSORLG00020020751	-	96	44.033	Oryzias_latipes_hni
ENSPVAG00000006457	RBM38	89	37.607	ENSORLG00020017871	rbm38	72	39.344	Oryzias_latipes_hni
ENSPVAG00000006457	RBM38	92	42.739	ENSORLG00015017040	-	96	42.975	Oryzias_latipes_hsok
ENSPVAG00000006457	RBM38	71	74.648	ENSORLG00015012606	rbm38	73	74.648	Oryzias_latipes_hsok
ENSPVAG00000006457	RBM38	89	37.179	ENSOMEG00000006805	rbm38	72	39.344	Oryzias_melastigma
ENSPVAG00000006457	RBM38	92	42.083	ENSOMEG00000023912	-	96	41.909	Oryzias_melastigma
ENSPVAG00000006457	RBM38	100	67.917	ENSOGAG00000029136	RBM38	100	67.917	Otolemur_garnettii
ENSPVAG00000006457	RBM38	100	68.201	ENSPPRG00000009507	RBM38	100	68.201	Panthera_pardus
ENSPVAG00000006457	RBM38	87	61.165	ENSPTRG00000013661	RBM38	95	94.521	Pan_troglodytes
ENSPVAG00000006457	RBM38	100	66.946	ENSPANG00000020919	-	100	66.946	Papio_anubis
ENSPVAG00000006457	RBM38	74	78.000	ENSPANG00000033127	-	80	78.000	Papio_anubis
ENSPVAG00000006457	RBM38	67	86.885	ENSPKIG00000025417	rbm38	96	41.525	Paramormyrops_kingsleyae
ENSPVAG00000006457	RBM38	92	44.737	ENSPKIG00000018122	-	96	45.575	Paramormyrops_kingsleyae
ENSPVAG00000006457	RBM38	93	54.018	ENSPSIG00000011649	RBM38	95	53.125	Pelodiscus_sinensis
ENSPVAG00000006457	RBM38	98	37.255	ENSPMGG00000011343	rbm38	79	39.216	Periophthalmus_magnuspinnatus
ENSPVAG00000006457	RBM38	64	86.538	ENSPMGG00000017094	-	67	86.538	Periophthalmus_magnuspinnatus
ENSPVAG00000006457	RBM38	100	56.667	ENSPCIG00000013648	RBM38	100	55.833	Phascolarctos_cinereus
ENSPVAG00000006457	RBM38	89	34.615	ENSPFOG00000011658	rbm38	72	40.217	Poecilia_formosa
ENSPVAG00000006457	RBM38	89	44.635	ENSPLAG00000002500	-	92	44.635	Poecilia_latipinna
ENSPVAG00000006457	RBM38	89	35.470	ENSPLAG00000005218	rbm38	72	40.217	Poecilia_latipinna
ENSPVAG00000006457	RBM38	89	35.043	ENSPMEG00000015770	rbm38	72	40.217	Poecilia_mexicana
ENSPVAG00000006457	RBM38	89	34.615	ENSPREG00000007398	rbm38	72	40.217	Poecilia_reticulata
ENSPVAG00000006457	RBM38	100	66.667	ENSPCOG00000026201	RBM38	100	66.667	Propithecus_coquereli
ENSPVAG00000006457	RBM38	96	39.662	ENSPNYG00000021373	rbm38	98	39.095	Pundamilia_nyererei
ENSPVAG00000006457	RBM38	66	85.484	ENSPNYG00000019727	-	71	85.484	Pundamilia_nyererei
ENSPVAG00000006457	RBM38	92	44.828	ENSPNAG00000015123	-	96	44.397	Pygocentrus_nattereri
ENSPVAG00000006457	RBM38	76	42.857	ENSPNAG00000010596	rbm38	75	42.857	Pygocentrus_nattereri
ENSPVAG00000006457	RBM38	100	64.435	ENSRNOG00000006420	Rbm38	100	64.435	Rattus_norvegicus
ENSPVAG00000006457	RBM38	75	83.544	ENSRROG00000036388	-	80	83.544	Rhinopithecus_roxellana
ENSPVAG00000006457	RBM38	91	64.352	ENSSBOG00000031053	RBM38	100	64.352	Saimiri_boliviensis_boliviensis
ENSPVAG00000006457	RBM38	89	41.364	ENSSFOG00015004453	rbm38	92	44.545	Scleropages_formosus
ENSPVAG00000006457	RBM38	66	85.484	ENSSDUG00000021082	RBM38	96	42.739	Seriola_dumerili
ENSPVAG00000006457	RBM38	92	39.419	ENSSDUG00000022611	rbm38	75	40.838	Seriola_dumerili
ENSPVAG00000006457	RBM38	92	39.419	ENSSLDG00000010845	rbm38	90	40.465	Seriola_lalandi_dorsalis
ENSPVAG00000006457	RBM38	66	85.484	ENSSLDG00000011778	RBM38	96	41.909	Seriola_lalandi_dorsalis
ENSPVAG00000006457	RBM38	92	39.004	ENSSPAG00000011113	rbm38	75	40.838	Stegastes_partitus
ENSPVAG00000006457	RBM38	66	85.484	ENSSPAG00000020989	RBM38	67	85.484	Stegastes_partitus
ENSPVAG00000006457	RBM38	100	69.038	ENSSSCG00000007504	RBM38	100	69.038	Sus_scrofa
ENSPVAG00000006457	RBM38	66	85.484	ENSTRUG00000019869	-	70	85.484	Takifugu_rubripes
ENSPVAG00000006457	RBM38	89	35.841	ENSTRUG00000024954	rbm38	73	37.778	Takifugu_rubripes
ENSPVAG00000006457	RBM38	62	94.231	ENSTNIG00000007093	-	68	94.231	Tetraodon_nigroviridis
ENSPVAG00000006457	RBM38	100	67.364	ENSUAMG00000019780	RBM38	100	67.364	Ursus_americanus
ENSPVAG00000006457	RBM38	100	66.946	ENSVVUG00000017246	RBM38	100	66.946	Vulpes_vulpes
ENSPVAG00000006457	RBM38	91	47.748	ENSXETG00000011268	rbm38	99	48.649	Xenopus_tropicalis
ENSPVAG00000006457	RBM38	89	36.910	ENSXMAG00000023662	rbm38	72	40.437	Xiphophorus_maculatus