EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000006465 (Gene tree)
Gene ID: -
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 1149 bases
Position: chrscaffold_11170:9956-11104
Accession: 105292777
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000006108	RRM_5	PF13893.6	1.5e-11	1	2
ENSPVAP00000006108	RRM_5	PF13893.6	1.5e-11	2	2
ENSPVAP00000006108	RRM_1	PF00076.22	2.2e-78	1	4
ENSPVAP00000006108	RRM_1	PF00076.22	2.2e-78	2	4
ENSPVAP00000006108	RRM_1	PF00076.22	2.2e-78	3	4
ENSPVAP00000006108	RRM_1	PF00076.22	2.2e-78	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000006465	PABPC5-201	1149	-	ENSPVAP00000006108	382 (aa)	XP_011359467	UPI00018B156C

Gene Model

Click here to download ENSPVAG00000006465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000006465's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000006465	PABPC5	95	59.066	ENSPVAG00000012663	PABPC1L	59	58.889
ENSPVAG00000006465	PABPC5	98	64.690	ENSPVAG00000016640	PABPC1	58	65.730
ENSPVAG00000006465	PABPC5	94	67.213	ENSPVAG00000002187	PABPC4	53	67.213
ENSPVAG00000006465	PABPC5	93	60.513	ENSPVAG00000016117	-	98	60.209
ENSPVAG00000006465	PABPC5	94	35.802	ENSPVAG00000002688	ELAVL2	83	35.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000006465	PABPC5	99	97.375	ENSG00000174740	PABPC5	99	97.375	Homo_sapiens
ENSPVAG00000006465	PABPC5	99	97.900	ENSAMEG00000020114	PABPC5	100	97.900	Ailuropoda_melanoleuca
ENSPVAG00000006465	PABPC5	99	97.375	ENSANAG00000005063	PABPC5	99	97.375	Aotus_nancymaae
ENSPVAG00000006465	PABPC5	100	96.859	ENSBTAG00000019942	PABPC5	100	96.859	Bos_taurus
ENSPVAG00000006465	PABPC5	99	96.850	ENSCJAG00000003665	PABPC5	99	96.850	Callithrix_jacchus
ENSPVAG00000006465	PABPC5	100	97.382	ENSCAFG00000017452	PABPC5	100	97.382	Canis_familiaris
ENSPVAG00000006465	PABPC5	100	96.859	ENSCHIG00000019004	PABPC5	100	96.859	Capra_hircus
ENSPVAG00000006465	PABPC5	100	97.382	ENSTSYG00000036351	PABPC5	100	97.382	Carlito_syrichta
ENSPVAG00000006465	PABPC5	99	87.435	ENSCAPG00000010714	PABPC5	100	87.435	Cavia_aperea
ENSPVAG00000006465	PABPC5	100	93.979	ENSCPOG00000002555	PABPC5	100	93.979	Cavia_porcellus
ENSPVAG00000006465	PABPC5	99	97.375	ENSCCAG00000032154	PABPC5	99	97.375	Cebus_capucinus
ENSPVAG00000006465	PABPC5	99	97.113	ENSCATG00000043083	PABPC5	99	97.113	Cercocebus_atys
ENSPVAG00000006465	PABPC5	100	95.026	ENSCLAG00000000647	PABPC5	100	95.026	Chinchilla_lanigera
ENSPVAG00000006465	PABPC5	99	97.113	ENSCSAG00000000065	PABPC5	99	97.113	Chlorocebus_sabaeus
ENSPVAG00000006465	PABPC5	99	97.113	ENSCANG00000011473	PABPC5	99	97.113	Colobus_angolensis_palliatus
ENSPVAG00000006465	PABPC5	100	93.717	ENSCGRG00000018699	Pabpc5	100	93.717	Cricetulus_griseus_crigri
ENSPVAG00000006465	PABPC5	100	78.329	ENSETEG00000011832	PABPC5	100	78.329	Echinops_telfairi
ENSPVAG00000006465	PABPC5	100	98.691	ENSEASG00005014396	PABPC5	100	98.691	Equus_asinus_asinus
ENSPVAG00000006465	PABPC5	100	98.691	ENSECAG00000003452	PABPC5	100	98.691	Equus_caballus
ENSPVAG00000006465	PABPC5	100	97.644	ENSFCAG00000004998	PABPC5	100	97.644	Felis_catus
ENSPVAG00000006465	PABPC5	100	96.073	ENSFDAG00000000126	PABPC5	100	96.073	Fukomys_damarensis
ENSPVAG00000006465	PABPC5	99	97.375	ENSGGOG00000007622	PABPC5	99	97.375	Gorilla_gorilla
ENSPVAG00000006465	PABPC5	95	95.872	ENSJJAG00000011960	Pabpc5	100	95.872	Jaculus_jaculus
ENSPVAG00000006465	PABPC5	99	97.113	ENSMFAG00000024561	PABPC5	99	97.113	Macaca_fascicularis
ENSPVAG00000006465	PABPC5	99	97.113	ENSMMUG00000011562	PABPC5	99	97.113	Macaca_mulatta
ENSPVAG00000006465	PABPC5	99	97.113	ENSMNEG00000037604	PABPC5	99	97.113	Macaca_nemestrina
ENSPVAG00000006465	PABPC5	99	97.113	ENSMLEG00000028318	PABPC5	99	97.113	Mandrillus_leucophaeus
ENSPVAG00000006465	PABPC5	100	96.335	ENSMICG00000041706	PABPC5	100	96.335	Microcebus_murinus
ENSPVAG00000006465	PABPC5	100	95.026	ENSMOCG00000001554	Pabpc5	100	95.026	Microtus_ochrogaster
ENSPVAG00000006465	PABPC5	99	93.947	MGP_CAROLIEiJ_G0033367	Pabpc5	99	93.947	Mus_caroli
ENSPVAG00000006465	PABPC5	99	94.474	ENSMUSG00000034732	Pabpc5	99	94.474	Mus_musculus
ENSPVAG00000006465	PABPC5	100	94.764	MGP_PahariEiJ_G0031908	Pabpc5	100	94.764	Mus_pahari
ENSPVAG00000006465	PABPC5	99	94.474	MGP_SPRETEiJ_G0034533	Pabpc5	99	94.474	Mus_spretus
ENSPVAG00000006465	PABPC5	100	96.859	ENSMPUG00000018465	PABPC5	100	96.859	Mustela_putorius_furo
ENSPVAG00000006465	PABPC5	100	96.859	ENSMLUG00000008244	PABPC5	100	96.859	Myotis_lucifugus
ENSPVAG00000006465	PABPC5	95	94.954	ENSNGAG00000004371	Pabpc5	100	94.954	Nannospalax_galili
ENSPVAG00000006465	PABPC5	99	97.375	ENSNLEG00000035086	PABPC5	99	97.375	Nomascus_leucogenys
ENSPVAG00000006465	PABPC5	98	97.738	ENSOPRG00000000856	PABPC5	100	97.738	Ochotona_princeps
ENSPVAG00000006465	PABPC5	100	97.120	ENSOCUG00000010919	PABPC5	100	97.120	Oryctolagus_cuniculus
ENSPVAG00000006465	PABPC5	100	96.073	ENSOGAG00000006882	PABPC5	100	96.073	Otolemur_garnettii
ENSPVAG00000006465	PABPC5	100	97.120	ENSOARG00000010260	PABPC5	100	97.120	Ovis_aries
ENSPVAG00000006465	PABPC5	99	97.113	ENSPPAG00000007378	PABPC5	99	97.113	Pan_paniscus
ENSPVAG00000006465	PABPC5	100	97.644	ENSPPRG00000010742	PABPC5	100	97.644	Panthera_pardus
ENSPVAG00000006465	PABPC5	100	97.644	ENSPTIG00000001480	PABPC5	100	97.644	Panthera_tigris_altaica
ENSPVAG00000006465	PABPC5	99	97.375	ENSPTRG00000022078	PABPC5	99	97.375	Pan_troglodytes
ENSPVAG00000006465	PABPC5	99	97.113	ENSPANG00000018282	PABPC5	99	97.113	Papio_anubis
ENSPVAG00000006465	PABPC5	100	95.026	ENSPEMG00000000171	Pabpc5	100	95.026	Peromyscus_maniculatus_bairdii
ENSPVAG00000006465	PABPC5	99	97.375	ENSPPYG00000020526	PABPC5	99	97.375	Pongo_abelii
ENSPVAG00000006465	PABPC5	99	97.818	ENSPCAG00000015577	PABPC5	100	97.818	Procavia_capensis
ENSPVAG00000006465	PABPC5	100	96.859	ENSPCOG00000000676	PABPC5	100	96.859	Propithecus_coquereli
ENSPVAG00000006465	PABPC5	100	94.241	ENSRNOG00000003354	Pabpc5	100	94.241	Rattus_norvegicus
ENSPVAG00000006465	PABPC5	99	97.113	ENSRBIG00000011760	PABPC5	99	97.113	Rhinopithecus_bieti
ENSPVAG00000006465	PABPC5	99	97.113	ENSRROG00000036708	PABPC5	99	97.113	Rhinopithecus_roxellana
ENSPVAG00000006465	PABPC5	99	97.375	ENSSBOG00000008658	PABPC5	99	97.375	Saimiri_boliviensis_boliviensis
ENSPVAG00000006465	PABPC5	100	94.503	ENSSARG00000014012	PABPC5	100	94.503	Sorex_araneus
ENSPVAG00000006465	PABPC5	100	97.382	ENSSSCG00000040194	PABPC5	100	97.382	Sus_scrofa
ENSPVAG00000006465	PABPC5	100	97.644	ENSTBEG00000016482	PABPC5	100	97.644	Tupaia_belangeri
ENSPVAG00000006465	PABPC5	100	97.382	ENSUAMG00000013627	PABPC5	100	97.382	Ursus_americanus
ENSPVAG00000006465	PABPC5	100	97.120	ENSUMAG00000023934	PABPC5	100	97.120	Ursus_maritimus
ENSPVAG00000006465	PABPC5	100	98.168	ENSVPAG00000001063	PABPC5	100	98.168	Vicugna_pacos
ENSPVAG00000006465	PABPC5	100	97.644	ENSVVUG00000013172	PABPC5	100	97.644	Vulpes_vulpes