EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000006482 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 33602 bases
Position: chrGeneScaffold_884:126391-159992
Accession: 11101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000006121	ResIII	PF04851.15	4.1e-11	1	1
ENSPVAP00000006121	DEAD	PF00270.29	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000006482	SMARCA5-201	3153	-	ENSPVAP00000006121	1050 (aa)	-	UPI00018B2891

Gene Model

Click here to download ENSPVAG00000006482's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000006482's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000006482	SMARCA5	54	39.223	ENSPVAG00000006084	CHD1L	65	39.223
ENSPVAG00000006482	SMARCA5	85	86.305	ENSPVAG00000003805	SMARCA1	90	80.147

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000006482	SMARCA5	100	98.478	ENSG00000153147	SMARCA5	99	98.478	Homo_sapiens
ENSPVAG00000006482	SMARCA5	100	99.049	ENSAMEG00000009585	SMARCA5	99	99.049	Ailuropoda_melanoleuca
ENSPVAG00000006482	SMARCA5	92	96.817	ENSAPLG00000009206	SMARCA5	100	96.817	Anas_platyrhynchos
ENSPVAG00000006482	SMARCA5	94	96.677	ENSACAG00000003038	SMARCA5	96	96.489	Anolis_carolinensis
ENSPVAG00000006482	SMARCA5	100	98.382	ENSANAG00000019345	SMARCA5	99	99.197	Aotus_nancymaae
ENSPVAG00000006482	SMARCA5	100	98.573	ENSBTAG00000003399	SMARCA5	99	98.573	Bos_taurus
ENSPVAG00000006482	SMARCA5	100	98.573	ENSCJAG00000002735	SMARCA5	99	98.573	Callithrix_jacchus
ENSPVAG00000006482	SMARCA5	100	98.953	ENSCAFG00000007525	SMARCA5	99	98.953	Canis_familiaris
ENSPVAG00000006482	SMARCA5	98	98.933	ENSCAFG00020025641	SMARCA5	99	98.933	Canis_lupus_dingo
ENSPVAG00000006482	SMARCA5	100	97.241	ENSCHIG00000016375	-	99	97.241	Capra_hircus
ENSPVAG00000006482	SMARCA5	100	98.953	ENSCHIG00000013730	-	99	98.953	Capra_hircus
ENSPVAG00000006482	SMARCA5	99	95.981	ENSTSYG00000009954	SMARCA5	99	99.698	Carlito_syrichta
ENSPVAG00000006482	SMARCA5	92	99.070	ENSCAPG00000013747	SMARCA5	95	99.070	Cavia_aperea
ENSPVAG00000006482	SMARCA5	100	97.810	ENSCPOG00000002259	SMARCA5	99	97.810	Cavia_porcellus
ENSPVAG00000006482	SMARCA5	100	98.573	ENSCCAG00000027215	SMARCA5	99	99.297	Cebus_capucinus
ENSPVAG00000006482	SMARCA5	100	98.573	ENSCATG00000044917	SMARCA5	99	98.573	Cercocebus_atys
ENSPVAG00000006482	SMARCA5	99	95.398	ENSCLAG00000006153	SMARCA5	100	99.396	Chinchilla_lanigera
ENSPVAG00000006482	SMARCA5	92	99.484	ENSCSAG00000003448	SMARCA5	100	99.484	Chlorocebus_sabaeus
ENSPVAG00000006482	SMARCA5	90	98.519	ENSCHOG00000011724	SMARCA5	89	98.519	Choloepus_hoffmanni
ENSPVAG00000006482	SMARCA5	95	98.195	ENSCPBG00000027535	SMARCA5	96	97.998	Chrysemys_picta_bellii
ENSPVAG00000006482	SMARCA5	100	98.382	ENSCANG00000041629	SMARCA5	99	98.382	Colobus_angolensis_palliatus
ENSPVAG00000006482	SMARCA5	100	97.719	ENSCGRG00001012719	Smarca5	99	97.719	Cricetulus_griseus_chok1gshd
ENSPVAG00000006482	SMARCA5	95	99.496	ENSCGRG00000001417	Smarca5	99	99.496	Cricetulus_griseus_crigri
ENSPVAG00000006482	SMARCA5	98	95.358	ENSDNOG00000009158	SMARCA5	97	95.793	Dasypus_novemcinctus
ENSPVAG00000006482	SMARCA5	90	90.823	ENSDORG00000003466	Smarca5	97	90.823	Dipodomys_ordii
ENSPVAG00000006482	SMARCA5	92	85.640	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSPVAG00000006482	SMARCA5	100	99.334	ENSEASG00005001866	SMARCA5	99	99.334	Equus_asinus_asinus
ENSPVAG00000006482	SMARCA5	100	99.334	ENSECAG00000002676	SMARCA5	99	99.334	Equus_caballus
ENSPVAG00000006482	SMARCA5	95	95.166	ENSEEUG00000013176	SMARCA5	100	95.166	Erinaceus_europaeus
ENSPVAG00000006482	SMARCA5	92	89.175	ENSELUG00000014653	SMARCA5	99	89.175	Esox_lucius
ENSPVAG00000006482	SMARCA5	100	99.049	ENSFCAG00000004544	SMARCA5	99	99.049	Felis_catus
ENSPVAG00000006482	SMARCA5	92	97.423	ENSFALG00000004987	SMARCA5	100	97.423	Ficedula_albicollis
ENSPVAG00000006482	SMARCA5	99	95.977	ENSFDAG00000021016	SMARCA5	100	99.597	Fukomys_damarensis
ENSPVAG00000006482	SMARCA5	97	86.739	ENSGMOG00000007519	SMARCA5	94	89.253	Gadus_morhua
ENSPVAG00000006482	SMARCA5	95	97.691	ENSGALG00000009913	SMARCA5	96	97.497	Gallus_gallus
ENSPVAG00000006482	SMARCA5	99	86.538	ENSGACG00000017238	SMARCA5	95	90.583	Gasterosteus_aculeatus
ENSPVAG00000006482	SMARCA5	96	97.332	ENSGAGG00000019882	SMARCA5	96	98.098	Gopherus_agassizii
ENSPVAG00000006482	SMARCA5	100	98.478	ENSGGOG00000012595	SMARCA5	99	99.396	Gorilla_gorilla
ENSPVAG00000006482	SMARCA5	96	89.573	ENSHGLG00000000317	-	95	89.679	Heterocephalus_glaber_female
ENSPVAG00000006482	SMARCA5	100	97.810	ENSHGLG00000000816	-	99	97.810	Heterocephalus_glaber_female
ENSPVAG00000006482	SMARCA5	95	99.496	ENSHGLG00100018421	-	100	99.496	Heterocephalus_glaber_male
ENSPVAG00000006482	SMARCA5	100	98.764	ENSSTOG00000010683	SMARCA5	99	98.764	Ictidomys_tridecemlineatus
ENSPVAG00000006482	SMARCA5	100	97.810	ENSJJAG00000014965	Smarca5	99	97.810	Jaculus_jaculus
ENSPVAG00000006482	SMARCA5	94	95.560	ENSLACG00000007091	SMARCA5	97	95.560	Latimeria_chalumnae
ENSPVAG00000006482	SMARCA5	94	92.284	ENSLOCG00000008966	SMARCA5	96	92.284	Lepisosteus_oculatus
ENSPVAG00000006482	SMARCA5	100	98.763	ENSLAFG00000007795	SMARCA5	99	98.763	Loxodonta_africana
ENSPVAG00000006482	SMARCA5	100	98.573	ENSMFAG00000043649	SMARCA5	99	98.573	Macaca_fascicularis
ENSPVAG00000006482	SMARCA5	100	98.573	ENSMMUG00000000829	SMARCA5	99	98.573	Macaca_mulatta
ENSPVAG00000006482	SMARCA5	100	98.573	ENSMNEG00000031916	SMARCA5	99	98.573	Macaca_nemestrina
ENSPVAG00000006482	SMARCA5	100	98.573	ENSMLEG00000042393	SMARCA5	99	98.573	Mandrillus_leucophaeus
ENSPVAG00000006482	SMARCA5	95	97.200	ENSMGAG00000003517	SMARCA5	99	97.200	Meleagris_gallopavo
ENSPVAG00000006482	SMARCA5	95	99.597	ENSMAUG00000015902	Smarca5	98	99.597	Mesocricetus_auratus
ENSPVAG00000006482	SMARCA5	100	98.763	ENSMICG00000003971	SMARCA5	99	98.763	Microcebus_murinus
ENSPVAG00000006482	SMARCA5	100	97.429	ENSMOCG00000016986	-	99	97.429	Microtus_ochrogaster
ENSPVAG00000006482	SMARCA5	99	96.542	ENSMODG00000000391	SMARCA5	97	97.266	Monodelphis_domestica
ENSPVAG00000006482	SMARCA5	100	97.810	ENSMUSG00000031715	Smarca5	99	97.810	Mus_musculus
ENSPVAG00000006482	SMARCA5	100	98.000	MGP_PahariEiJ_G0022862	Smarca5	99	98.000	Mus_pahari
ENSPVAG00000006482	SMARCA5	100	99.429	ENSMLUG00000000468	SMARCA5	99	99.429	Myotis_lucifugus
ENSPVAG00000006482	SMARCA5	100	98.095	ENSNGAG00000000441	Smarca5	99	98.095	Nannospalax_galili
ENSPVAG00000006482	SMARCA5	100	98.573	ENSNLEG00000005383	SMARCA5	99	98.573	Nomascus_leucogenys
ENSPVAG00000006482	SMARCA5	92	91.219	ENSMEUG00000001267	SMARCA5	100	91.219	Notamacropus_eugenii
ENSPVAG00000006482	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSPVAG00000006482	SMARCA5	92	99.071	ENSOANG00000013921	SMARCA5	100	99.071	Ornithorhynchus_anatinus
ENSPVAG00000006482	SMARCA5	92	99.690	ENSOCUG00000013042	SMARCA5	100	99.690	Oryctolagus_cuniculus
ENSPVAG00000006482	SMARCA5	100	98.668	ENSOGAG00000009702	SMARCA5	99	98.668	Otolemur_garnettii
ENSPVAG00000006482	SMARCA5	99	98.667	ENSOARG00000010589	SMARCA5	99	98.667	Ovis_aries
ENSPVAG00000006482	SMARCA5	100	98.287	ENSPPAG00000028523	SMARCA5	99	99.295	Pan_paniscus
ENSPVAG00000006482	SMARCA5	98	93.087	ENSPPRG00000004925	SMARCA5	97	94.141	Panthera_pardus
ENSPVAG00000006482	SMARCA5	96	99.505	ENSPTIG00000020959	SMARCA5	97	99.505	Panthera_tigris_altaica
ENSPVAG00000006482	SMARCA5	100	98.382	ENSPTRG00000016472	SMARCA5	99	99.396	Pan_troglodytes
ENSPVAG00000006482	SMARCA5	100	98.573	ENSPANG00000001175	SMARCA5	99	98.573	Papio_anubis
ENSPVAG00000006482	SMARCA5	93	90.779	ENSPKIG00000015699	SMARCA5	98	89.835	Paramormyrops_kingsleyae
ENSPVAG00000006482	SMARCA5	95	89.400	ENSPKIG00000015885	SMARCA5	100	91.237	Paramormyrops_kingsleyae
ENSPVAG00000006482	SMARCA5	95	96.189	ENSPSIG00000004177	SMARCA5	100	96.189	Pelodiscus_sinensis
ENSPVAG00000006482	SMARCA5	92	89.918	ENSPMGG00000012316	SMARCA5	100	89.918	Periophthalmus_magnuspinnatus
ENSPVAG00000006482	SMARCA5	97	97.741	ENSPEMG00000008060	Smarca5	99	97.741	Peromyscus_maniculatus_bairdii
ENSPVAG00000006482	SMARCA5	61	86.583	ENSPMAG00000008026	SMARCA5	99	86.583	Petromyzon_marinus
ENSPVAG00000006482	SMARCA5	96	69.783	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSPVAG00000006482	SMARCA5	99	96.435	ENSPCIG00000003926	SMARCA5	97	97.168	Phascolarctos_cinereus
ENSPVAG00000006482	SMARCA5	100	98.668	ENSPPYG00000015091	SMARCA5	99	98.668	Pongo_abelii
ENSPVAG00000006482	SMARCA5	86	90.390	ENSPCAG00000014230	SMARCA5	89	90.715	Procavia_capensis
ENSPVAG00000006482	SMARCA5	100	96.004	ENSPCOG00000026744	SMARCA5	99	96.177	Propithecus_coquereli
ENSPVAG00000006482	SMARCA5	97	88.137	ENSPNAG00000027824	SMARCA5	97	90.353	Pygocentrus_nattereri
ENSPVAG00000006482	SMARCA5	95	99.397	ENSRNOG00000018149	Smarca5	100	99.397	Rattus_norvegicus
ENSPVAG00000006482	SMARCA5	100	98.384	ENSRBIG00000044644	SMARCA5	99	98.384	Rhinopithecus_bieti
ENSPVAG00000006482	SMARCA5	98	98.256	ENSRROG00000029591	SMARCA5	99	99.396	Rhinopithecus_roxellana
ENSPVAG00000006482	SMARCA5	100	98.478	ENSSBOG00000036257	SMARCA5	99	98.478	Saimiri_boliviensis_boliviensis
ENSPVAG00000006482	SMARCA5	95	99.094	ENSSHAG00000008464	SMARCA5	100	99.094	Sarcophilus_harrisii
ENSPVAG00000006482	SMARCA5	95	90.251	ENSSFOG00015013252	SMARCA5	97	90.251	Scleropages_formosus
ENSPVAG00000006482	SMARCA5	99	92.639	ENSSPUG00000007604	SMARCA5	99	96.482	Sphenodon_punctatus
ENSPVAG00000006482	SMARCA5	100	98.858	ENSSSCG00000009047	SMARCA5	99	98.858	Sus_scrofa
ENSPVAG00000006482	SMARCA5	96	96.226	ENSTGUG00000002408	SMARCA5	99	96.697	Taeniopygia_guttata
ENSPVAG00000006482	SMARCA5	98	98.933	ENSUAMG00000023495	SMARCA5	98	98.933	Ursus_americanus
ENSPVAG00000006482	SMARCA5	95	99.900	ENSUMAG00000015324	SMARCA5	97	99.900	Ursus_maritimus
ENSPVAG00000006482	SMARCA5	100	98.858	ENSVPAG00000008982	SMARCA5	99	98.858	Vicugna_pacos
ENSPVAG00000006482	SMARCA5	100	98.953	ENSVVUG00000017473	SMARCA5	99	98.953	Vulpes_vulpes
ENSPVAG00000006482	SMARCA5	90	93.136	ENSXETG00000017566	smarca5	95	93.136	Xenopus_tropicalis