EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000006615 (Gene tree)
Gene ID: -
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 4050 bases
Position: chrGeneScaffold_1764:117119-121168
Accession: 11316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000006247	RRM_1	PF00076.22	1.3e-15	1	1
ENSPVAP00000006247	RRM_3	PF08777.11	5.6e-32	1	1
ENSPVAP00000006247	La	PF05383.17	4.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000006615	SSB-201	1056	-	ENSPVAP00000006247	352 (aa)	-	UPI00018B4DA9

Gene Model

Click here to download ENSPVAG00000006615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000006615's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000006615	SSB	100	93.838	ENSG00000138385	SSB	100	98.333	Homo_sapiens
ENSPVAG00000006615	SSB	99	58.263	ENSAPOG00000003448	ssb	93	58.543	Acanthochromis_polyacanthus
ENSPVAG00000006615	SSB	100	92.120	ENSAMEG00000010507	SSB	88	92.120	Ailuropoda_melanoleuca
ENSPVAG00000006615	SSB	99	59.544	ENSACIG00000001738	ssb	92	60.227	Amphilophus_citrinellus
ENSPVAG00000006615	SSB	99	59.104	ENSAOCG00000020398	ssb	93	59.104	Amphiprion_ocellaris
ENSPVAG00000006615	SSB	99	59.384	ENSAPEG00000020395	ssb	93	59.384	Amphiprion_percula
ENSPVAG00000006615	SSB	100	58.939	ENSATEG00000016884	ssb	89	58.939	Anabas_testudineus
ENSPVAG00000006615	SSB	99	73.297	ENSAPLG00000006109	SSB	87	73.297	Anas_platyrhynchos
ENSPVAG00000006615	SSB	97	69.795	ENSACAG00000017008	SSB	86	68.839	Anolis_carolinensis
ENSPVAG00000006615	SSB	100	81.586	ENSANAG00000027195	-	86	84.463	Aotus_nancymaae
ENSPVAG00000006615	SSB	99	55.556	ENSACLG00000010798	ssb	93	53.090	Astatotilapia_calliptera
ENSPVAG00000006615	SSB	87	60.586	ENSAMXG00000012606	ssb	86	58.357	Astyanax_mexicanus
ENSPVAG00000006615	SSB	100	96.045	ENSBTAG00000008716	SSB	88	96.045	Bos_taurus
ENSPVAG00000006615	SSB	82	34.915	WBGene00016653	C44E4.4	85	32.743	Caenorhabditis_elegans
ENSPVAG00000006615	SSB	100	94.068	ENSCJAG00000045073	SSB	87	94.068	Callithrix_jacchus
ENSPVAG00000006615	SSB	100	95.480	ENSCAFG00000012418	SSB	87	95.480	Canis_familiaris
ENSPVAG00000006615	SSB	100	95.480	ENSCAFG00020002900	SSB	87	95.480	Canis_lupus_dingo
ENSPVAG00000006615	SSB	100	89.518	ENSCHIG00000022196	-	87	89.518	Capra_hircus
ENSPVAG00000006615	SSB	100	95.480	ENSCHIG00000022624	-	87	95.480	Capra_hircus
ENSPVAG00000006615	SSB	99	96.034	ENSTSYG00000000097	SSB	87	96.034	Carlito_syrichta
ENSPVAG00000006615	SSB	100	95.763	ENSCPOG00000003338	SSB	87	95.763	Cavia_porcellus
ENSPVAG00000006615	SSB	100	94.350	ENSCCAG00000035147	SSB	87	94.350	Cebus_capucinus
ENSPVAG00000006615	SSB	81	83.946	ENSCATG00000036701	SSB	85	83.946	Cercocebus_atys
ENSPVAG00000006615	SSB	100	67.797	ENSCATG00000042909	-	84	67.797	Cercocebus_atys
ENSPVAG00000006615	SSB	100	95.763	ENSCLAG00000015617	-	87	95.763	Chinchilla_lanigera
ENSPVAG00000006615	SSB	100	94.350	ENSCSAG00000015200	SSB	78	94.350	Chlorocebus_sabaeus
ENSPVAG00000006615	SSB	100	84.986	ENSCSAG00000018390	-	89	84.986	Chlorocebus_sabaeus
ENSPVAG00000006615	SSB	100	94.350	ENSCHOG00000007763	SSB	87	94.350	Choloepus_hoffmanni
ENSPVAG00000006615	SSB	97	82.456	ENSCPBG00000006519	SSB	86	81.714	Chrysemys_picta_bellii
ENSPVAG00000006615	SSB	100	79.037	ENSCANG00000033240	-	87	79.037	Colobus_angolensis_palliatus
ENSPVAG00000006615	SSB	99	74.859	ENSCANG00000028838	-	83	74.859	Colobus_angolensis_palliatus
ENSPVAG00000006615	SSB	100	94.350	ENSCANG00000027695	SSB	87	94.350	Colobus_angolensis_palliatus
ENSPVAG00000006615	SSB	87	86.557	ENSCGRG00001024831	Ssb	86	82.670	Cricetulus_griseus_chok1gshd
ENSPVAG00000006615	SSB	87	86.557	ENSCGRG00000005387	Ssb	86	82.670	Cricetulus_griseus_crigri
ENSPVAG00000006615	SSB	100	58.939	ENSCSEG00000011599	ssb	89	58.939	Cynoglossus_semilaevis
ENSPVAG00000006615	SSB	100	59.053	ENSCVAG00000021558	ssb	90	59.053	Cyprinodon_variegatus
ENSPVAG00000006615	SSB	100	58.708	ENSDARG00000029252	ssb	89	58.708	Danio_rerio
ENSPVAG00000006615	SSB	100	94.068	ENSDNOG00000013450	SSB	87	94.068	Dasypus_novemcinctus
ENSPVAG00000006615	SSB	98	82.486	ENSDORG00000005543	Ssb	87	85.028	Dipodomys_ordii
ENSPVAG00000006615	SSB	91	34.545	FBgn0011638	La	81	35.608	Drosophila_melanogaster
ENSPVAG00000006615	SSB	57	94.030	ENSETEG00000004614	-	52	94.030	Echinops_telfairi
ENSPVAG00000006615	SSB	89	50.321	ENSEBUG00000001237	ssb	89	48.256	Eptatretus_burgeri
ENSPVAG00000006615	SSB	100	97.740	ENSEASG00005022835	SSB	87	97.740	Equus_asinus_asinus
ENSPVAG00000006615	SSB	100	97.740	ENSECAG00000018495	SSB	87	97.740	Equus_caballus
ENSPVAG00000006615	SSB	81	75.352	ENSEEUG00000008077	SSB	72	75.352	Erinaceus_europaeus
ENSPVAG00000006615	SSB	87	65.798	ENSELUG00000020929	ssb	87	62.286	Esox_lucius
ENSPVAG00000006615	SSB	100	95.763	ENSFCAG00000011601	SSB	87	95.763	Felis_catus
ENSPVAG00000006615	SSB	98	78.261	ENSFALG00000000930	SSB	85	78.261	Ficedula_albicollis
ENSPVAG00000006615	SSB	100	95.480	ENSFDAG00000000598	SSB	87	95.480	Fukomys_damarensis
ENSPVAG00000006615	SSB	73	56.870	ENSFHEG00000003268	ssb	95	54.902	Fundulus_heteroclitus
ENSPVAG00000006615	SSB	89	60.000	ENSGMOG00000002664	ssb	89	56.546	Gadus_morhua
ENSPVAG00000006615	SSB	98	78.551	ENSGALG00000009677	SSB	85	78.551	Gallus_gallus
ENSPVAG00000006615	SSB	88	60.645	ENSGAFG00000002749	ssb	88	57.865	Gambusia_affinis
ENSPVAG00000006615	SSB	98	57.143	ENSGACG00000005107	ssb	88	57.143	Gasterosteus_aculeatus
ENSPVAG00000006615	SSB	97	82.164	ENSGAGG00000007807	SSB	86	81.429	Gopherus_agassizii
ENSPVAG00000006615	SSB	99	77.337	ENSGGOG00000024891	-	86	77.337	Gorilla_gorilla
ENSPVAG00000006615	SSB	54	89.286	ENSGGOG00000023471	-	80	89.286	Gorilla_gorilla
ENSPVAG00000006615	SSB	99	55.271	ENSHBUG00000006584	ssb	88	55.271	Haplochromis_burtoni
ENSPVAG00000006615	SSB	100	93.906	ENSHGLG00000017580	-	88	93.906	Heterocephalus_glaber_female
ENSPVAG00000006615	SSB	100	86.761	ENSHGLG00000004478	-	87	86.761	Heterocephalus_glaber_female
ENSPVAG00000006615	SSB	100	88.701	ENSHGLG00000005832	-	90	88.701	Heterocephalus_glaber_female
ENSPVAG00000006615	SSB	100	93.906	ENSHGLG00100003084	-	88	93.906	Heterocephalus_glaber_male
ENSPVAG00000006615	SSB	100	82.486	ENSHGLG00100008767	-	88	82.486	Heterocephalus_glaber_male
ENSPVAG00000006615	SSB	98	55.620	ENSHCOG00000019011	ssb	89	56.056	Hippocampus_comes
ENSPVAG00000006615	SSB	98	60.745	ENSIPUG00000003681	SSB	86	61.429	Ictalurus_punctatus
ENSPVAG00000006615	SSB	100	94.334	ENSSTOG00000008416	SSB	87	94.334	Ictidomys_tridecemlineatus
ENSPVAG00000006615	SSB	98	81.967	ENSJJAG00000023158	-	88	81.967	Jaculus_jaculus
ENSPVAG00000006615	SSB	91	75.309	ENSJJAG00000016250	-	86	75.309	Jaculus_jaculus
ENSPVAG00000006615	SSB	99	58.543	ENSKMAG00000017317	ssb	89	58.543	Kryptolebias_marmoratus
ENSPVAG00000006615	SSB	98	56.410	ENSLBEG00000017345	ssb	89	56.695	Labrus_bergylta
ENSPVAG00000006615	SSB	97	71.345	ENSLACG00000014056	SSB	85	71.182	Latimeria_chalumnae
ENSPVAG00000006615	SSB	99	68.466	ENSLOCG00000007933	ssb	87	69.209	Lepisosteus_oculatus
ENSPVAG00000006615	SSB	80	71.174	ENSLAFG00000026721	-	92	71.174	Loxodonta_africana
ENSPVAG00000006615	SSB	100	77.904	ENSLAFG00000028909	-	87	77.904	Loxodonta_africana
ENSPVAG00000006615	SSB	100	86.486	ENSLAFG00000000867	-	88	88.378	Loxodonta_africana
ENSPVAG00000006615	SSB	95	79.701	ENSMFAG00000041478	-	93	79.701	Macaca_fascicularis
ENSPVAG00000006615	SSB	100	94.350	ENSMFAG00000039066	SSB	87	94.350	Macaca_fascicularis
ENSPVAG00000006615	SSB	100	78.470	ENSMMUG00000011724	-	84	78.470	Macaca_mulatta
ENSPVAG00000006615	SSB	100	62.712	ENSMMUG00000039889	-	85	62.994	Macaca_mulatta
ENSPVAG00000006615	SSB	100	94.350	ENSMMUG00000023051	SSB	87	94.350	Macaca_mulatta
ENSPVAG00000006615	SSB	95	79.701	ENSMNEG00000034698	-	93	79.701	Macaca_nemestrina
ENSPVAG00000006615	SSB	97	81.105	ENSMNEG00000028321	SSB	68	98.925	Macaca_nemestrina
ENSPVAG00000006615	SSB	100	94.350	ENSMLEG00000035717	SSB	87	94.350	Mandrillus_leucophaeus
ENSPVAG00000006615	SSB	100	64.589	ENSMLEG00000042644	-	85	64.589	Mandrillus_leucophaeus
ENSPVAG00000006615	SSB	99	60.623	ENSMAMG00000004800	ssb	88	60.623	Mastacembelus_armatus
ENSPVAG00000006615	SSB	99	55.556	ENSMZEG00005005749	ssb	93	53.090	Maylandia_zebra
ENSPVAG00000006615	SSB	97	79.179	ENSMGAG00000010328	SSB	89	78.142	Meleagris_gallopavo
ENSPVAG00000006615	SSB	100	95.198	ENSMICG00000028252	-	87	95.198	Microcebus_murinus
ENSPVAG00000006615	SSB	99	88.571	ENSMICG00000033304	-	89	88.571	Microcebus_murinus
ENSPVAG00000006615	SSB	99	78.237	ENSMODG00000008227	-	88	80.165	Monodelphis_domestica
ENSPVAG00000006615	SSB	99	66.477	ENSMODG00000019271	-	84	55.337	Monodelphis_domestica
ENSPVAG00000006615	SSB	82	83.088	ENSMODG00000007027	-	84	83.088	Monodelphis_domestica
ENSPVAG00000006615	SSB	87	62.136	ENSMALG00000008045	ssb	86	59.437	Monopterus_albus
ENSPVAG00000006615	SSB	95	81.250	MGP_CAROLIEiJ_G0023629	-	88	91.975	Mus_caroli
ENSPVAG00000006615	SSB	95	80.398	ENSMUSG00000068882	Ssb	88	91.975	Mus_musculus
ENSPVAG00000006615	SSB	95	80.627	MGP_PahariEiJ_G0025081	-	88	91.975	Mus_pahari
ENSPVAG00000006615	SSB	95	80.398	MGP_SPRETEiJ_G0024551	Ssb	88	91.975	Mus_spretus
ENSPVAG00000006615	SSB	100	96.328	ENSMPUG00000000785	SSB	87	96.328	Mustela_putorius_furo
ENSPVAG00000006615	SSB	99	90.736	ENSMLUG00000016316	SSB	88	90.736	Myotis_lucifugus
ENSPVAG00000006615	SSB	100	54.930	ENSNBRG00000012661	ssb	93	53.221	Neolamprologus_brichardi
ENSPVAG00000006615	SSB	100	94.633	ENSNLEG00000004958	SSB	87	94.633	Nomascus_leucogenys
ENSPVAG00000006615	SSB	100	69.492	ENSNLEG00000028754	-	85	69.492	Nomascus_leucogenys
ENSPVAG00000006615	SSB	70	89.113	ENSMEUG00000001650	-	100	89.113	Notamacropus_eugenii
ENSPVAG00000006615	SSB	73	72.868	ENSOPRG00000008475	-	89	72.868	Ochotona_princeps
ENSPVAG00000006615	SSB	96	91.988	ENSODEG00000004202	-	99	88.385	Octodon_degus
ENSPVAG00000006615	SSB	99	55.714	ENSONIG00000008776	ssb	88	55.714	Oreochromis_niloticus
ENSPVAG00000006615	SSB	99	86.648	ENSOANG00000008543	SSB	87	86.648	Ornithorhynchus_anatinus
ENSPVAG00000006615	SSB	100	93.785	ENSOCUG00000010396	SSB	87	94.350	Oryctolagus_cuniculus
ENSPVAG00000006615	SSB	100	58.659	ENSORLG00000017208	ssb	89	59.218	Oryzias_latipes
ENSPVAG00000006615	SSB	87	63.192	ENSORLG00020022574	ssb	89	59.384	Oryzias_latipes_hni
ENSPVAG00000006615	SSB	100	58.659	ENSORLG00015016592	ssb	89	58.939	Oryzias_latipes_hsok
ENSPVAG00000006615	SSB	86	63.072	ENSOMEG00000003193	ssb	89	60.393	Oryzias_melastigma
ENSPVAG00000006615	SSB	100	87.871	ENSOGAG00000029768	SSB	88	87.871	Otolemur_garnettii
ENSPVAG00000006615	SSB	100	95.198	ENSOARG00000002906	SSB	87	95.198	Ovis_aries
ENSPVAG00000006615	SSB	100	93.838	ENSPPAG00000042673	SSB	88	93.838	Pan_paniscus
ENSPVAG00000006615	SSB	100	75.989	ENSPPAG00000032427	-	82	85.047	Pan_paniscus
ENSPVAG00000006615	SSB	96	76.968	ENSPPAG00000006189	-	88	76.968	Pan_paniscus
ENSPVAG00000006615	SSB	100	95.763	ENSPPRG00000006599	SSB	87	95.763	Panthera_pardus
ENSPVAG00000006615	SSB	100	95.480	ENSPTIG00000011021	SSB	85	95.480	Panthera_tigris_altaica
ENSPVAG00000006615	SSB	100	71.751	ENSPTRG00000042880	-	86	71.751	Pan_troglodytes
ENSPVAG00000006615	SSB	100	93.838	ENSPTRG00000012620	SSB	88	93.838	Pan_troglodytes
ENSPVAG00000006615	SSB	100	94.350	ENSPANG00000007440	SSB	87	94.350	Papio_anubis
ENSPVAG00000006615	SSB	100	63.739	ENSPANG00000031877	-	82	63.739	Papio_anubis
ENSPVAG00000006615	SSB	92	69.040	ENSPANG00000034126	-	77	69.659	Papio_anubis
ENSPVAG00000006615	SSB	99	64.205	ENSPKIG00000019325	ssb	93	62.535	Paramormyrops_kingsleyae
ENSPVAG00000006615	SSB	97	78.947	ENSPSIG00000002265	SSB	81	77.904	Pelodiscus_sinensis
ENSPVAG00000006615	SSB	97	54.728	ENSPMGG00000020075	ssb	92	55.014	Periophthalmus_magnuspinnatus
ENSPVAG00000006615	SSB	87	49.675	ENSPMAG00000002982	ssb	84	47.645	Petromyzon_marinus
ENSPVAG00000006615	SSB	99	84.136	ENSPCIG00000028591	-	88	85.836	Phascolarctos_cinereus
ENSPVAG00000006615	SSB	99	58.824	ENSPFOG00000009650	ssb	89	59.104	Poecilia_formosa
ENSPVAG00000006615	SSB	88	61.613	ENSPLAG00000020498	ssb	89	58.989	Poecilia_latipinna
ENSPVAG00000006615	SSB	99	58.824	ENSPMEG00000001051	ssb	89	58.824	Poecilia_mexicana
ENSPVAG00000006615	SSB	99	58.146	ENSPREG00000003708	ssb	93	58.427	Poecilia_reticulata
ENSPVAG00000006615	SSB	100	94.633	ENSPPYG00000012919	SSB	87	94.633	Pongo_abelii
ENSPVAG00000006615	SSB	100	85.311	ENSPCAG00000010276	SSB	92	88.983	Procavia_capensis
ENSPVAG00000006615	SSB	100	81.073	ENSPCOG00000023189	-	86	81.073	Propithecus_coquereli
ENSPVAG00000006615	SSB	100	91.243	ENSPCOG00000015741	-	87	91.243	Propithecus_coquereli
ENSPVAG00000006615	SSB	99	55.556	ENSPNYG00000006444	ssb	93	53.090	Pundamilia_nyererei
ENSPVAG00000006615	SSB	87	62.541	ENSPNAG00000011708	ssb	86	60.286	Pygocentrus_nattereri
ENSPVAG00000006615	SSB	98	79.396	ENSRNOG00000007998	Ssb	87	79.396	Rattus_norvegicus
ENSPVAG00000006615	SSB	98	80.627	ENSRNOG00000011606	AABR07061825.1	87	80.627	Rattus_norvegicus
ENSPVAG00000006615	SSB	99	66.102	ENSRBIG00000029918	-	84	66.667	Rhinopithecus_bieti
ENSPVAG00000006615	SSB	99	78.223	ENSRBIG00000041232	-	90	78.223	Rhinopithecus_bieti
ENSPVAG00000006615	SSB	100	75.209	ENSRBIG00000041972	SSB	71	98.925	Rhinopithecus_bieti
ENSPVAG00000006615	SSB	93	85.586	ENSRBIG00000041608	-	90	85.586	Rhinopithecus_bieti
ENSPVAG00000006615	SSB	99	77.401	ENSRROG00000007149	-	86	77.401	Rhinopithecus_roxellana
ENSPVAG00000006615	SSB	100	94.350	ENSRROG00000040346	SSB	87	94.350	Rhinopithecus_roxellana
ENSPVAG00000006615	SSB	100	78.470	ENSRROG00000031684	-	89	78.470	Rhinopithecus_roxellana
ENSPVAG00000006615	SSB	93	90.390	ENSRROG00000034102	-	87	86.236	Rhinopithecus_roxellana
ENSPVAG00000006615	SSB	100	94.915	ENSSBOG00000027204	SSB	87	94.915	Saimiri_boliviensis_boliviensis
ENSPVAG00000006615	SSB	99	83.286	ENSSHAG00000018062	SSB	87	84.986	Sarcophilus_harrisii
ENSPVAG00000006615	SSB	99	66.197	ENSSFOG00015000550	ssb	87	67.042	Scleropages_formosus
ENSPVAG00000006615	SSB	98	58.239	ENSSMAG00000013885	ssb	94	58.523	Scophthalmus_maximus
ENSPVAG00000006615	SSB	99	58.824	ENSSDUG00000020117	ssb	88	59.829	Seriola_dumerili
ENSPVAG00000006615	SSB	99	56.497	ENSSLDG00000002525	ssb	87	57.471	Seriola_lalandi_dorsalis
ENSPVAG00000006615	SSB	100	87.252	ENSSARG00000007747	SSB	92	87.252	Sorex_araneus
ENSPVAG00000006615	SSB	99	79.310	ENSSPUG00000012112	SSB	86	79.310	Sphenodon_punctatus
ENSPVAG00000006615	SSB	99	59.664	ENSSPAG00000005696	ssb	93	59.664	Stegastes_partitus
ENSPVAG00000006615	SSB	98	79.885	ENSSSCG00000015938	SSB	87	79.885	Sus_scrofa
ENSPVAG00000006615	SSB	99	77.714	ENSTGUG00000007942	SSB	86	77.714	Taeniopygia_guttata
ENSPVAG00000006615	SSB	98	59.599	ENSTRUG00000017839	ssb	88	60.000	Takifugu_rubripes
ENSPVAG00000006615	SSB	97	59.710	ENSTNIG00000000915	ssb	94	59.710	Tetraodon_nigroviridis
ENSPVAG00000006615	SSB	79	98.925	ENSTBEG00000009056	SSB	68	98.925	Tupaia_belangeri
ENSPVAG00000006615	SSB	100	95.480	ENSTTRG00000002152	SSB	87	95.480	Tursiops_truncatus
ENSPVAG00000006615	SSB	100	96.045	ENSUAMG00000027833	SSB	93	96.045	Ursus_americanus
ENSPVAG00000006615	SSB	100	96.045	ENSUMAG00000013907	SSB	87	96.045	Ursus_maritimus
ENSPVAG00000006615	SSB	100	97.458	ENSVPAG00000007183	SSB	88	97.458	Vicugna_pacos
ENSPVAG00000006615	SSB	100	95.480	ENSVVUG00000016573	SSB	68	95.480	Vulpes_vulpes
ENSPVAG00000006615	SSB	99	63.897	ENSXETG00000025402	ssb	82	65.616	Xenopus_tropicalis
ENSPVAG00000006615	SSB	99	55.775	ENSXCOG00000019109	ssb	93	56.056	Xiphophorus_couchianus
ENSPVAG00000006615	SSB	99	57.584	ENSXMAG00000004888	ssb	88	57.865	Xiphophorus_maculatus