EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000006740 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 20443 bases
Position: chrGeneScaffold_914:73065-93507
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000006361	CSD	PF00313.22	1.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000006739	YBX3-201	1122	-	ENSPVAP00000006361	373 (aa)	-	UPI00018B213A

Gene Model

Click here to download ENSPVAG00000006740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000006740's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000006740	YBX3	77	91.724	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSPVAG00000006740	YBX3	72	89.552	ENSAMEG00000009393	YBX3	89	78.797	Ailuropoda_melanoleuca
ENSPVAG00000006740	YBX3	53	66.995	ENSAPLG00000003147	YBX3	100	56.597	Anas_platyrhynchos
ENSPVAG00000006740	YBX3	62	93.162	ENSANAG00000024492	-	94	78.716	Aotus_nancymaae
ENSPVAG00000006740	YBX3	77	84.000	ENSBTAG00000009663	YBX3	83	74.051	Bos_taurus
ENSPVAG00000006740	YBX3	77	89.655	ENSCJAG00000021660	-	100	77.867	Callithrix_jacchus
ENSPVAG00000006740	YBX3	58	96.279	ENSCAFG00000013401	YBX3	68	96.279	Canis_familiaris
ENSPVAG00000006740	YBX3	77	88.850	ENSCAFG00020006412	YBX3	100	77.212	Canis_lupus_dingo
ENSPVAG00000006740	YBX3	77	84.333	ENSCHIG00000010863	YBX3	88	76.899	Capra_hircus
ENSPVAG00000006740	YBX3	94	64.583	ENSTSYG00000035821	-	72	95.745	Carlito_syrichta
ENSPVAG00000006740	YBX3	54	97.030	ENSTSYG00000004204	-	88	79.443	Carlito_syrichta
ENSPVAG00000006740	YBX3	54	91.542	ENSCAPG00000015039	YBX3	93	74.913	Cavia_aperea
ENSPVAG00000006740	YBX3	55	92.754	ENSCPOG00000011329	YBX3	92	76.115	Cavia_porcellus
ENSPVAG00000006740	YBX3	77	91.379	ENSCCAG00000016469	YBX3	100	78.933	Cebus_capucinus
ENSPVAG00000006740	YBX3	77	91.379	ENSCATG00000034411	YBX3	100	78.667	Cercocebus_atys
ENSPVAG00000006740	YBX3	54	92.040	ENSCLAG00000016030	YBX3	94	75.261	Chinchilla_lanigera
ENSPVAG00000006740	YBX3	77	92.069	ENSCSAG00000008744	YBX3	100	79.200	Chlorocebus_sabaeus
ENSPVAG00000006740	YBX3	77	93.750	ENSCHOG00000011988	YBX3	56	95.745	Choloepus_hoffmanni
ENSPVAG00000006740	YBX3	55	82.927	ENSCPBG00000014147	YBX3	83	67.000	Chrysemys_picta_bellii
ENSPVAG00000006740	YBX3	56	95.714	ENSCANG00000036801	YBX3	94	78.716	Colobus_angolensis_palliatus
ENSPVAG00000006740	YBX3	85	78.549	ENSCGRG00001016148	Ybx3	82	79.000	Cricetulus_griseus_chok1gshd
ENSPVAG00000006740	YBX3	77	76.712	ENSCGRG00000004563	Ybx3	98	76.712	Cricetulus_griseus_crigri
ENSPVAG00000006740	YBX3	66	82.745	ENSDORG00000009103	Ybx3	81	78.049	Dipodomys_ordii
ENSPVAG00000006740	YBX3	76	80.282	ENSETEG00000002557	YBX3	99	80.282	Echinops_telfairi
ENSPVAG00000006740	YBX3	77	88.194	ENSEASG00005014726	YBX3	95	87.429	Equus_asinus_asinus
ENSPVAG00000006740	YBX3	77	91.638	ENSECAG00000013777	YBX3	100	79.357	Equus_caballus
ENSPVAG00000006740	YBX3	53	96.482	ENSEEUG00000010415	YBX3	100	79.577	Erinaceus_europaeus
ENSPVAG00000006740	YBX3	100	82.306	ENSFCAG00000027748	YBX3	100	82.306	Felis_catus
ENSPVAG00000006740	YBX3	57	67.290	ENSFALG00000003661	YBX3	73	67.290	Ficedula_albicollis
ENSPVAG00000006740	YBX3	54	89.055	ENSFDAG00000021192	YBX3	92	72.822	Fukomys_damarensis
ENSPVAG00000006740	YBX3	77	66.436	ENSGAGG00000017780	YBX3	88	64.241	Gopherus_agassizii
ENSPVAG00000006740	YBX3	77	92.069	ENSGGOG00000001352	YBX3	100	79.200	Gorilla_gorilla
ENSPVAG00000006740	YBX3	56	80.930	ENSHGLG00000014798	-	89	65.902	Heterocephalus_glaber_female
ENSPVAG00000006740	YBX3	60	78.571	ENSHGLG00000015495	-	71	77.049	Heterocephalus_glaber_female
ENSPVAG00000006740	YBX3	69	83.846	ENSSTOG00000032577	-	87	72.240	Ictidomys_tridecemlineatus
ENSPVAG00000006740	YBX3	60	65.929	ENSJJAG00000014239	Ybx3	61	84.783	Jaculus_jaculus
ENSPVAG00000006740	YBX3	77	92.708	ENSLAFG00000017247	YBX3	100	79.412	Loxodonta_africana
ENSPVAG00000006740	YBX3	77	91.379	ENSMFAG00000039369	YBX3	100	78.667	Macaca_fascicularis
ENSPVAG00000006740	YBX3	64	93.333	ENSMMUG00000022469	YBX3	98	77.987	Macaca_mulatta
ENSPVAG00000006740	YBX3	77	91.034	ENSMNEG00000045109	YBX3	100	78.400	Macaca_nemestrina
ENSPVAG00000006740	YBX3	69	80.769	ENSMLEG00000033618	YBX3	81	77.003	Mandrillus_leucophaeus
ENSPVAG00000006740	YBX3	70	80.405	ENSMGAG00000014224	YBX3	100	54.704	Meleagris_gallopavo
ENSPVAG00000006740	YBX3	93	74.499	ENSMAUG00000012185	Ybx3	93	78.667	Mesocricetus_auratus
ENSPVAG00000006740	YBX3	77	93.403	ENSMICG00000038002	-	100	80.214	Microcebus_murinus
ENSPVAG00000006740	YBX3	68	69.048	ENSMICG00000031459	-	56	78.613	Microcebus_murinus
ENSPVAG00000006740	YBX3	83	78.457	ENSMOCG00000016291	Ybx3	98	79.000	Microtus_ochrogaster
ENSPVAG00000006740	YBX3	54	88.235	ENSMODG00000018248	YBX3	69	88.018	Monodelphis_domestica
ENSPVAG00000006740	YBX3	85	77.918	MGP_CAROLIEiJ_G0028947	Ybx3	82	78.333	Mus_caroli
ENSPVAG00000006740	YBX3	85	77.918	ENSMUSG00000030189	Ybx3	82	78.333	Mus_musculus
ENSPVAG00000006740	YBX3	85	78.549	MGP_PahariEiJ_G0022709	Ybx3	82	79.000	Mus_pahari
ENSPVAG00000006740	YBX3	85	78.233	MGP_SPRETEiJ_G0029994	Ybx3	82	78.667	Mus_spretus
ENSPVAG00000006740	YBX3	77	77.703	ENSMPUG00000011810	YBX3	100	68.504	Mustela_putorius_furo
ENSPVAG00000006740	YBX3	71	76.866	ENSMLUG00000007476	YBX3	100	76.866	Myotis_lucifugus
ENSPVAG00000006740	YBX3	62	86.695	ENSNGAG00000000710	Ybx3	100	51.104	Nannospalax_galili
ENSPVAG00000006740	YBX3	86	74.455	ENSNLEG00000034844	YBX3	90	74.528	Nomascus_leucogenys
ENSPVAG00000006740	YBX3	54	67.943	ENSMEUG00000002507	-	81	77.907	Notamacropus_eugenii
ENSPVAG00000006740	YBX3	62	86.325	ENSODEG00000017957	YBX3	93	71.924	Octodon_degus
ENSPVAG00000006740	YBX3	56	87.560	ENSOCUG00000001889	YBX3	87	73.000	Oryctolagus_cuniculus
ENSPVAG00000006740	YBX3	77	91.186	ENSOGAG00000013245	YBX3	100	78.478	Otolemur_garnettii
ENSPVAG00000006740	YBX3	56	76.415	ENSOARG00000020919	YBX3	99	69.697	Ovis_aries
ENSPVAG00000006740	YBX3	77	82.353	ENSPPAG00000039068	YBX3	82	78.716	Pan_paniscus
ENSPVAG00000006740	YBX3	100	82.306	ENSPPRG00000005859	YBX3	100	82.306	Panthera_pardus
ENSPVAG00000006740	YBX3	77	79.720	ENSPTIG00000005322	YBX3	81	79.720	Panthera_tigris_altaica
ENSPVAG00000006740	YBX3	77	92.414	ENSPTRG00000004681	YBX3	100	79.467	Pan_troglodytes
ENSPVAG00000006740	YBX3	77	91.034	ENSPANG00000010280	YBX3	100	78.400	Papio_anubis
ENSPVAG00000006740	YBX3	64	94.538	ENSPEMG00000012132	-	94	79.333	Peromyscus_maniculatus_bairdii
ENSPVAG00000006740	YBX3	69	65.637	ENSPCIG00000029949	YBX3	100	65.637	Phascolarctos_cinereus
ENSPVAG00000006740	YBX3	100	78.667	ENSPPYG00000004279	YBX3	100	78.667	Pongo_abelii
ENSPVAG00000006740	YBX3	79	89.116	ENSPCAG00000001397	YBX3	82	93.671	Procavia_capensis
ENSPVAG00000006740	YBX3	85	78.864	ENSRNOG00000005480	Ybx3	82	79.333	Rattus_norvegicus
ENSPVAG00000006740	YBX3	77	89.655	ENSRBIG00000039208	YBX3	100	78.133	Rhinopithecus_bieti
ENSPVAG00000006740	YBX3	77	90.690	ENSRROG00000029638	YBX3	100	78.400	Rhinopithecus_roxellana
ENSPVAG00000006740	YBX3	72	77.574	ENSSBOG00000030573	YBX3	93	72.240	Saimiri_boliviensis_boliviensis
ENSPVAG00000006740	YBX3	53	84.951	ENSSHAG00000003262	YBX3	98	68.041	Sarcophilus_harrisii
ENSPVAG00000006740	YBX3	77	88.814	ENSSSCG00000000633	YBX3	100	80.263	Sus_scrofa
ENSPVAG00000006740	YBX3	53	65.672	ENSTGUG00000012047	YBX3	100	54.895	Taeniopygia_guttata
ENSPVAG00000006740	YBX3	77	80.969	ENSTBEG00000012570	YBX3	81	77.816	Tupaia_belangeri
ENSPVAG00000006740	YBX3	51	92.670	ENSUAMG00000016662	YBX3	100	75.812	Ursus_americanus
ENSPVAG00000006740	YBX3	77	79.371	ENSUMAG00000016118	YBX3	94	79.371	Ursus_maritimus
ENSPVAG00000006740	YBX3	53	66.162	ENSVPAG00000000876	YBX3	100	57.597	Vicugna_pacos
ENSPVAG00000006740	YBX3	51	92.147	ENSVVUG00000004956	YBX3	100	75.451	Vulpes_vulpes
ENSPVAG00000006740	YBX3	77	50.000	ENSXETG00000016239	ybx3	94	46.497	Xenopus_tropicalis