EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000006761 (Gene tree)
Gene ID: -
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 10739 bases
Position: chrGeneScaffold_3119:23087-33825
Accession: 2324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000006381	CPSF_A	PF03178.15	4.5e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000006762	CPSF1-201	4287	-	ENSPVAP00000006381	1429 (aa)	-	UPI00018B20DB

Gene Model

Click here to download ENSPVAG00000006761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000006761's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000006761	CPSF1	91	98.571	ENSG00000071894	CPSF1	91	98.571	Homo_sapiens
ENSPVAG00000006761	CPSF1	91	88.571	ENSAPOG00000019621	cpsf1	91	88.571	Acanthochromis_polyacanthus
ENSPVAG00000006761	CPSF1	88	92.857	ENSAMEG00000005557	CPSF1	90	92.857	Ailuropoda_melanoleuca
ENSPVAG00000006761	CPSF1	91	87.714	ENSACIG00000006112	cpsf1	91	87.714	Amphilophus_citrinellus
ENSPVAG00000006761	CPSF1	91	88.571	ENSAOCG00000007120	cpsf1	91	88.571	Amphiprion_ocellaris
ENSPVAG00000006761	CPSF1	91	88.571	ENSAPEG00000005755	cpsf1	91	88.571	Amphiprion_percula
ENSPVAG00000006761	CPSF1	91	88.286	ENSATEG00000011097	cpsf1	91	88.286	Anabas_testudineus
ENSPVAG00000006761	CPSF1	84	90.551	ENSACAG00000009655	CPSF1	91	90.551	Anolis_carolinensis
ENSPVAG00000006761	CPSF1	91	98.571	ENSANAG00000036514	CPSF1	91	98.571	Aotus_nancymaae
ENSPVAG00000006761	CPSF1	91	87.714	ENSACLG00000012231	cpsf1	90	87.714	Astatotilapia_calliptera
ENSPVAG00000006761	CPSF1	91	76.857	ENSAMXG00000008485	cpsf1	90	76.000	Astyanax_mexicanus
ENSPVAG00000006761	CPSF1	91	99.130	ENSBTAG00000008355	CPSF1	89	99.130	Bos_taurus
ENSPVAG00000006761	CPSF1	87	40.503	WBGene00022301	cpsf-1	97	40.751	Caenorhabditis_elegans
ENSPVAG00000006761	CPSF1	91	98.286	ENSCJAG00000021421	CPSF1	91	98.286	Callithrix_jacchus
ENSPVAG00000006761	CPSF1	88	99.429	ENSCAFG00000001600	CPSF1	90	99.429	Canis_familiaris
ENSPVAG00000006761	CPSF1	91	99.429	ENSCAFG00020020821	CPSF1	91	99.429	Canis_lupus_dingo
ENSPVAG00000006761	CPSF1	91	91.667	ENSCHIG00000015833	CPSF1	91	90.729	Capra_hircus
ENSPVAG00000006761	CPSF1	91	98.857	ENSTSYG00000028560	CPSF1	91	98.857	Carlito_syrichta
ENSPVAG00000006761	CPSF1	88	99.143	ENSCAPG00000014921	CPSF1	89	99.143	Cavia_aperea
ENSPVAG00000006761	CPSF1	91	99.143	ENSCPOG00000011448	CPSF1	90	99.143	Cavia_porcellus
ENSPVAG00000006761	CPSF1	91	98.571	ENSCCAG00000037658	CPSF1	91	98.571	Cebus_capucinus
ENSPVAG00000006761	CPSF1	91	98.571	ENSCATG00000037234	CPSF1	91	98.571	Cercocebus_atys
ENSPVAG00000006761	CPSF1	91	99.143	ENSCLAG00000012166	CPSF1	91	99.143	Chinchilla_lanigera
ENSPVAG00000006761	CPSF1	91	98.571	ENSCSAG00000008502	CPSF1	91	98.571	Chlorocebus_sabaeus
ENSPVAG00000006761	CPSF1	91	91.304	ENSCPBG00000018910	CPSF1	88	91.304	Chrysemys_picta_bellii
ENSPVAG00000006761	CPSF1	87	50.836	ENSCING00000000514	-	90	50.836	Ciona_intestinalis
ENSPVAG00000006761	CPSF1	91	50.852	ENSCSAVG00000002293	-	95	50.485	Ciona_savignyi
ENSPVAG00000006761	CPSF1	90	93.143	ENSCANG00000032760	CPSF1	96	88.889	Colobus_angolensis_palliatus
ENSPVAG00000006761	CPSF1	91	98.857	ENSCGRG00001016344	Cpsf1	91	98.857	Cricetulus_griseus_chok1gshd
ENSPVAG00000006761	CPSF1	91	98.857	ENSCGRG00000003118	Cpsf1	90	98.857	Cricetulus_griseus_crigri
ENSPVAG00000006761	CPSF1	91	85.429	ENSCSEG00000013464	cpsf1	90	85.429	Cynoglossus_semilaevis
ENSPVAG00000006761	CPSF1	76	84.857	ENSCVAG00000014059	cpsf1	96	74.879	Cyprinodon_variegatus
ENSPVAG00000006761	CPSF1	91	88.000	ENSDARG00000034178	cpsf1	91	88.000	Danio_rerio
ENSPVAG00000006761	CPSF1	88	98.571	ENSDORG00000006278	Cpsf1	89	98.571	Dipodomys_ordii
ENSPVAG00000006761	CPSF1	91	52.286	FBgn0024698	Cpsf160	91	52.286	Drosophila_melanogaster
ENSPVAG00000006761	CPSF1	77	98.658	ENSETEG00000006022	CPSF1	79	98.658	Echinops_telfairi
ENSPVAG00000006761	CPSF1	91	99.429	ENSEASG00005010774	CPSF1	91	99.429	Equus_asinus_asinus
ENSPVAG00000006761	CPSF1	91	99.429	ENSECAG00000022209	CPSF1	91	99.429	Equus_caballus
ENSPVAG00000006761	CPSF1	91	98.571	ENSEEUG00000000471	CPSF1	91	98.571	Erinaceus_europaeus
ENSPVAG00000006761	CPSF1	91	88.000	ENSELUG00000012271	cpsf1	91	88.000	Esox_lucius
ENSPVAG00000006761	CPSF1	91	99.143	ENSFDAG00000016060	CPSF1	91	99.143	Fukomys_damarensis
ENSPVAG00000006761	CPSF1	91	84.571	ENSFHEG00000016801	cpsf1	90	84.571	Fundulus_heteroclitus
ENSPVAG00000006761	CPSF1	91	85.714	ENSGMOG00000000796	cpsf1	90	85.714	Gadus_morhua
ENSPVAG00000006761	CPSF1	87	82.979	ENSGAFG00000018890	cpsf1	90	82.979	Gambusia_affinis
ENSPVAG00000006761	CPSF1	91	86.571	ENSGACG00000008703	cpsf1	91	86.571	Gasterosteus_aculeatus
ENSPVAG00000006761	CPSF1	91	80.685	ENSGAGG00000004276	CPSF1	88	92.473	Gopherus_agassizii
ENSPVAG00000006761	CPSF1	91	98.571	ENSGGOG00000016185	CPSF1	91	98.571	Gorilla_gorilla
ENSPVAG00000006761	CPSF1	91	87.714	ENSHBUG00000018900	cpsf1	90	87.714	Haplochromis_burtoni
ENSPVAG00000006761	CPSF1	91	99.143	ENSHGLG00000016139	CPSF1	91	99.143	Heterocephalus_glaber_female
ENSPVAG00000006761	CPSF1	91	99.143	ENSHGLG00100009750	CPSF1	91	99.143	Heterocephalus_glaber_male
ENSPVAG00000006761	CPSF1	91	86.571	ENSHCOG00000018509	cpsf1	91	86.571	Hippocampus_comes
ENSPVAG00000006761	CPSF1	91	77.493	ENSIPUG00000011259	cpsf1	91	77.493	Ictalurus_punctatus
ENSPVAG00000006761	CPSF1	88	99.143	ENSSTOG00000009957	CPSF1	89	99.143	Ictidomys_tridecemlineatus
ENSPVAG00000006761	CPSF1	91	98.286	ENSJJAG00000023002	Cpsf1	91	98.286	Jaculus_jaculus
ENSPVAG00000006761	CPSF1	88	85.484	ENSKMAG00000001940	cpsf1	96	85.484	Kryptolebias_marmoratus
ENSPVAG00000006761	CPSF1	91	87.714	ENSLBEG00000003601	cpsf1	91	87.714	Labrus_bergylta
ENSPVAG00000006761	CPSF1	79	88.286	ENSLACG00000000233	CPSF1	82	88.286	Latimeria_chalumnae
ENSPVAG00000006761	CPSF1	91	90.341	ENSLOCG00000008484	cpsf1	91	90.341	Lepisosteus_oculatus
ENSPVAG00000006761	CPSF1	88	98.857	ENSLAFG00000022601	CPSF1	90	98.857	Loxodonta_africana
ENSPVAG00000006761	CPSF1	91	98.571	ENSMFAG00000037013	CPSF1	91	98.571	Macaca_fascicularis
ENSPVAG00000006761	CPSF1	91	98.571	ENSMMUG00000007380	CPSF1	91	98.571	Macaca_mulatta
ENSPVAG00000006761	CPSF1	88	98.571	ENSMNEG00000043564	CPSF1	90	98.571	Macaca_nemestrina
ENSPVAG00000006761	CPSF1	91	98.571	ENSMLEG00000043010	CPSF1	91	98.571	Mandrillus_leucophaeus
ENSPVAG00000006761	CPSF1	91	88.857	ENSMAMG00000003803	cpsf1	91	88.857	Mastacembelus_armatus
ENSPVAG00000006761	CPSF1	91	87.714	ENSMZEG00005001168	cpsf1	90	87.714	Maylandia_zebra
ENSPVAG00000006761	CPSF1	91	99.143	ENSMAUG00000003601	Cpsf1	91	99.143	Mesocricetus_auratus
ENSPVAG00000006761	CPSF1	91	99.143	ENSMICG00000015767	CPSF1	91	99.143	Microcebus_murinus
ENSPVAG00000006761	CPSF1	91	99.429	ENSMOCG00000022758	Cpsf1	91	99.429	Microtus_ochrogaster
ENSPVAG00000006761	CPSF1	91	87.143	ENSMMOG00000021245	cpsf1	90	87.143	Mola_mola
ENSPVAG00000006761	CPSF1	91	98.857	ENSMODG00000010755	CPSF1	91	98.857	Monodelphis_domestica
ENSPVAG00000006761	CPSF1	91	88.000	ENSMALG00000020545	cpsf1	91	88.000	Monopterus_albus
ENSPVAG00000006761	CPSF1	91	99.143	MGP_CAROLIEiJ_G0019936	Cpsf1	91	99.143	Mus_caroli
ENSPVAG00000006761	CPSF1	91	99.143	ENSMUSG00000034022	Cpsf1	91	99.143	Mus_musculus
ENSPVAG00000006761	CPSF1	91	99.143	MGP_PahariEiJ_G0019946	Cpsf1	91	99.143	Mus_pahari
ENSPVAG00000006761	CPSF1	91	99.143	MGP_SPRETEiJ_G0020839	Cpsf1	91	99.143	Mus_spretus
ENSPVAG00000006761	CPSF1	85	98.551	ENSMPUG00000006419	CPSF1	84	98.551	Mustela_putorius_furo
ENSPVAG00000006761	CPSF1	91	98.857	ENSNGAG00000022460	Cpsf1	91	98.857	Nannospalax_galili
ENSPVAG00000006761	CPSF1	91	87.714	ENSNBRG00000000813	cpsf1	90	87.714	Neolamprologus_brichardi
ENSPVAG00000006761	CPSF1	78	97.452	ENSNLEG00000010633	-	89	97.452	Nomascus_leucogenys
ENSPVAG00000006761	CPSF1	75	98.773	ENSMEUG00000014922	CPSF1	77	98.773	Notamacropus_eugenii
ENSPVAG00000006761	CPSF1	50	98.276	ENSOPRG00000004693	-	58	98.276	Ochotona_princeps
ENSPVAG00000006761	CPSF1	91	99.143	ENSODEG00000013995	CPSF1	91	99.143	Octodon_degus
ENSPVAG00000006761	CPSF1	91	87.429	ENSONIG00000007676	cpsf1	91	87.429	Oreochromis_niloticus
ENSPVAG00000006761	CPSF1	58	92.857	ENSOANG00000010716	CPSF1	88	92.857	Ornithorhynchus_anatinus
ENSPVAG00000006761	CPSF1	91	86.000	ENSORLG00000013544	cpsf1	91	86.000	Oryzias_latipes
ENSPVAG00000006761	CPSF1	91	86.000	ENSORLG00020021693	cpsf1	91	86.000	Oryzias_latipes_hni
ENSPVAG00000006761	CPSF1	91	86.000	ENSORLG00015009979	cpsf1	91	86.000	Oryzias_latipes_hsok
ENSPVAG00000006761	CPSF1	91	85.429	ENSOMEG00000011849	cpsf1	91	85.429	Oryzias_melastigma
ENSPVAG00000006761	CPSF1	91	99.143	ENSOGAG00000000315	CPSF1	91	99.143	Otolemur_garnettii
ENSPVAG00000006761	CPSF1	91	98.571	ENSPPAG00000019280	CPSF1	91	98.571	Pan_paniscus
ENSPVAG00000006761	CPSF1	91	98.571	ENSPTRG00000049288	-	91	98.571	Pan_troglodytes
ENSPVAG00000006761	CPSF1	91	98.830	ENSPTRG00000051253	-	90	98.830	Pan_troglodytes
ENSPVAG00000006761	CPSF1	88	98.571	ENSPANG00000015005	CPSF1	90	98.571	Papio_anubis
ENSPVAG00000006761	CPSF1	91	88.857	ENSPKIG00000002582	cpsf1	91	88.406	Paramormyrops_kingsleyae
ENSPVAG00000006761	CPSF1	91	98.857	ENSPCIG00000009035	CPSF1	93	98.857	Phascolarctos_cinereus
ENSPVAG00000006761	CPSF1	91	85.429	ENSPFOG00000012870	cpsf1	91	85.429	Poecilia_formosa
ENSPVAG00000006761	CPSF1	91	85.143	ENSPREG00000016307	cpsf1	91	85.143	Poecilia_reticulata
ENSPVAG00000006761	CPSF1	91	97.143	ENSPPYG00000018973	CPSF1	93	97.143	Pongo_abelii
ENSPVAG00000006761	CPSF1	87	95.614	ENSPCAG00000011541	CPSF1	90	95.614	Procavia_capensis
ENSPVAG00000006761	CPSF1	91	90.312	ENSPCOG00000020001	CPSF1	96	89.372	Propithecus_coquereli
ENSPVAG00000006761	CPSF1	91	87.714	ENSPNYG00000004906	cpsf1	91	87.714	Pundamilia_nyererei
ENSPVAG00000006761	CPSF1	91	78.857	ENSPNAG00000024395	cpsf1	90	78.857	Pygocentrus_nattereri
ENSPVAG00000006761	CPSF1	91	98.857	ENSRNOG00000030705	Cpsf1	91	98.857	Rattus_norvegicus
ENSPVAG00000006761	CPSF1	91	98.571	ENSRBIG00000044907	CPSF1	91	98.571	Rhinopithecus_bieti
ENSPVAG00000006761	CPSF1	91	98.571	ENSRROG00000044861	CPSF1	91	98.571	Rhinopithecus_roxellana
ENSPVAG00000006761	CPSF1	88	98.571	ENSSBOG00000027177	CPSF1	90	98.571	Saimiri_boliviensis_boliviensis
ENSPVAG00000006761	CPSF1	91	98.571	ENSSHAG00000006500	CPSF1	91	98.571	Sarcophilus_harrisii
ENSPVAG00000006761	CPSF1	91	88.857	ENSSFOG00015004606	cpsf1	90	88.857	Scleropages_formosus
ENSPVAG00000006761	CPSF1	91	88.571	ENSSMAG00000020547	cpsf1	91	88.571	Scophthalmus_maximus
ENSPVAG00000006761	CPSF1	91	88.000	ENSSDUG00000001100	cpsf1	90	88.000	Seriola_dumerili
ENSPVAG00000006761	CPSF1	91	88.000	ENSSLDG00000003619	cpsf1	90	88.000	Seriola_lalandi_dorsalis
ENSPVAG00000006761	CPSF1	81	98.722	ENSSARG00000003643	CPSF1	83	98.722	Sorex_araneus
ENSPVAG00000006761	CPSF1	87	92.286	ENSSPUG00000014396	CPSF1	90	92.286	Sphenodon_punctatus
ENSPVAG00000006761	CPSF1	91	88.000	ENSSPAG00000005349	cpsf1	91	88.000	Stegastes_partitus
ENSPVAG00000006761	CPSF1	91	98.857	ENSSSCG00000005906	CPSF1	90	98.857	Sus_scrofa
ENSPVAG00000006761	CPSF1	86	85.924	ENSTRUG00000013134	cpsf1	90	86.000	Takifugu_rubripes
ENSPVAG00000006761	CPSF1	90	85.714	ENSTNIG00000014027	cpsf1	91	85.795	Tetraodon_nigroviridis
ENSPVAG00000006761	CPSF1	68	97.037	ENSTBEG00000001756	CPSF1	79	97.037	Tupaia_belangeri
ENSPVAG00000006761	CPSF1	81	99.143	ENSTTRG00000001937	CPSF1	80	99.143	Tursiops_truncatus
ENSPVAG00000006761	CPSF1	88	99.429	ENSUAMG00000006476	CPSF1	89	99.429	Ursus_americanus
ENSPVAG00000006761	CPSF1	91	85.143	ENSXCOG00000003608	cpsf1	90	85.143	Xiphophorus_couchianus
ENSPVAG00000006761	CPSF1	91	85.429	ENSXMAG00000005798	cpsf1	90	85.429	Xiphophorus_maculatus