EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000007593 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 32857 bases
Position: chrGeneScaffold_1184:91589-124445
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000007173	zf-CCCH	PF00642.24	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000007597	RC3H1-201	3357	-	ENSPVAP00000007173	1118 (aa)	-	UPI00018B2C36

Gene Model

Click here to download ENSPVAG00000007593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000007593's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000007593	RC3H1	100	88.173	ENSG00000135870	RC3H1	100	88.173	Homo_sapiens
ENSPVAG00000007593	RC3H1	100	87.898	ENSAMEG00000015657	RC3H1	100	87.898	Ailuropoda_melanoleuca
ENSPVAG00000007593	RC3H1	100	80.192	ENSAPLG00000005341	RC3H1	100	79.476	Anas_platyrhynchos
ENSPVAG00000007593	RC3H1	100	77.205	ENSACAG00000015271	RC3H1	100	76.903	Anolis_carolinensis
ENSPVAG00000007593	RC3H1	100	87.732	ENSANAG00000036716	RC3H1	100	87.820	Aotus_nancymaae
ENSPVAG00000007593	RC3H1	100	86.849	ENSBTAG00000052708	RC3H1	100	86.849	Bos_taurus
ENSPVAG00000007593	RC3H1	100	87.467	ENSCJAG00000009106	RC3H1	100	87.555	Callithrix_jacchus
ENSPVAG00000007593	RC3H1	100	87.986	ENSCAFG00000014434	RC3H1	100	87.986	Canis_familiaris
ENSPVAG00000007593	RC3H1	100	87.908	ENSCAFG00020017112	RC3H1	100	87.908	Canis_lupus_dingo
ENSPVAG00000007593	RC3H1	100	87.191	ENSCHIG00000002873	RC3H1	100	87.191	Capra_hircus
ENSPVAG00000007593	RC3H1	99	86.307	ENSTSYG00000003913	RC3H1	99	86.307	Carlito_syrichta
ENSPVAG00000007593	RC3H1	100	83.289	ENSCPOG00000004349	RC3H1	100	82.935	Cavia_porcellus
ENSPVAG00000007593	RC3H1	100	85.878	ENSCCAG00000025652	RC3H1	100	85.966	Cebus_capucinus
ENSPVAG00000007593	RC3H1	100	87.996	ENSCATG00000033497	RC3H1	100	87.996	Cercocebus_atys
ENSPVAG00000007593	RC3H1	100	86.231	ENSCLAG00000011267	RC3H1	100	86.231	Chinchilla_lanigera
ENSPVAG00000007593	RC3H1	96	88.029	ENSCSAG00000011823	RC3H1	85	88.029	Chlorocebus_sabaeus
ENSPVAG00000007593	RC3H1	100	81.459	ENSCPBG00000014670	RC3H1	100	80.404	Chrysemys_picta_bellii
ENSPVAG00000007593	RC3H1	100	88.007	ENSCANG00000032120	RC3H1	100	88.007	Colobus_angolensis_palliatus
ENSPVAG00000007593	RC3H1	100	85.411	ENSCGRG00001020812	Rc3h1	100	85.057	Cricetulus_griseus_chok1gshd
ENSPVAG00000007593	RC3H1	100	85.411	ENSCGRG00000011952	Rc3h1	100	85.057	Cricetulus_griseus_crigri
ENSPVAG00000007593	RC3H1	54	90.193	ENSDNOG00000011494	RC3H1	99	90.193	Dasypus_novemcinctus
ENSPVAG00000007593	RC3H1	100	86.749	ENSDORG00000004855	Rc3h1	100	86.926	Dipodomys_ordii
ENSPVAG00000007593	RC3H1	81	84.910	ENSETEG00000012064	RC3H1	81	99.441	Echinops_telfairi
ENSPVAG00000007593	RC3H1	100	86.572	ENSEASG00005017000	RC3H1	100	86.572	Equus_asinus_asinus
ENSPVAG00000007593	RC3H1	100	86.396	ENSECAG00000021208	RC3H1	94	99.609	Equus_caballus
ENSPVAG00000007593	RC3H1	82	93.162	ENSEEUG00000014861	RC3H1	85	93.162	Erinaceus_europaeus
ENSPVAG00000007593	RC3H1	100	88.085	ENSFCAG00000014924	RC3H1	100	88.085	Felis_catus
ENSPVAG00000007593	RC3H1	100	79.196	ENSFALG00000002947	RC3H1	100	78.040	Ficedula_albicollis
ENSPVAG00000007593	RC3H1	100	86.143	ENSFDAG00000013303	RC3H1	100	86.143	Fukomys_damarensis
ENSPVAG00000007593	RC3H1	100	79.386	ENSGALG00000004587	RC3H1	100	78.841	Gallus_gallus
ENSPVAG00000007593	RC3H1	100	79.595	ENSGAGG00000018194	RC3H1	100	78.980	Gopherus_agassizii
ENSPVAG00000007593	RC3H1	100	81.442	ENSGGOG00000005735	RC3H1	100	81.442	Gorilla_gorilla
ENSPVAG00000007593	RC3H1	88	84.556	ENSHGLG00000004183	-	99	84.556	Heterocephalus_glaber_female
ENSPVAG00000007593	RC3H1	100	86.055	ENSHGLG00100008577	RC3H1	100	86.055	Heterocephalus_glaber_male
ENSPVAG00000007593	RC3H1	100	87.026	ENSSTOG00000016033	RC3H1	94	100.000	Ictidomys_tridecemlineatus
ENSPVAG00000007593	RC3H1	100	86.207	ENSJJAG00000018915	Rc3h1	100	86.030	Jaculus_jaculus
ENSPVAG00000007593	RC3H1	100	68.416	ENSLACG00000016186	RC3H1	100	69.799	Latimeria_chalumnae
ENSPVAG00000007593	RC3H1	97	87.876	ENSLAFG00000004367	RC3H1	100	87.876	Loxodonta_africana
ENSPVAG00000007593	RC3H1	100	87.908	ENSMFAG00000033725	RC3H1	100	87.908	Macaca_fascicularis
ENSPVAG00000007593	RC3H1	100	87.820	ENSMMUG00000000630	RC3H1	100	87.820	Macaca_mulatta
ENSPVAG00000007593	RC3H1	100	87.996	ENSMNEG00000035968	RC3H1	100	87.996	Macaca_nemestrina
ENSPVAG00000007593	RC3H1	100	88.085	ENSMLEG00000037455	RC3H1	100	88.085	Mandrillus_leucophaeus
ENSPVAG00000007593	RC3H1	97	84.879	ENSMAUG00000020864	Rc3h1	100	84.375	Mesocricetus_auratus
ENSPVAG00000007593	RC3H1	100	88.163	ENSMICG00000003000	RC3H1	100	88.163	Microcebus_murinus
ENSPVAG00000007593	RC3H1	93	83.886	ENSMOCG00000016587	Rc3h1	92	97.765	Microtus_ochrogaster
ENSPVAG00000007593	RC3H1	100	82.892	ENSMODG00000004289	RC3H1	100	82.981	Monodelphis_domestica
ENSPVAG00000007593	RC3H1	100	85.159	MGP_CAROLIEiJ_G0014756	Rc3h1	100	84.806	Mus_caroli
ENSPVAG00000007593	RC3H1	100	84.982	ENSMUSG00000040423	Rc3h1	100	84.629	Mus_musculus
ENSPVAG00000007593	RC3H1	100	85.159	MGP_PahariEiJ_G0027992	Rc3h1	100	84.806	Mus_pahari
ENSPVAG00000007593	RC3H1	100	84.806	MGP_SPRETEiJ_G0015563	Rc3h1	100	84.452	Mus_spretus
ENSPVAG00000007593	RC3H1	100	87.555	ENSMPUG00000004747	RC3H1	100	87.544	Mustela_putorius_furo
ENSPVAG00000007593	RC3H1	100	87.191	ENSMLUG00000011127	RC3H1	100	87.191	Myotis_lucifugus
ENSPVAG00000007593	RC3H1	100	86.837	ENSNGAG00000011135	Rc3h1	100	86.572	Nannospalax_galili
ENSPVAG00000007593	RC3H1	100	87.996	ENSNLEG00000015327	RC3H1	100	87.996	Nomascus_leucogenys
ENSPVAG00000007593	RC3H1	99	75.221	ENSOPRG00000013068	RC3H1	99	75.221	Ochotona_princeps
ENSPVAG00000007593	RC3H1	100	86.143	ENSODEG00000014185	RC3H1	100	86.143	Octodon_degus
ENSPVAG00000007593	RC3H1	100	82.969	ENSOANG00000000924	RC3H1	100	82.445	Ornithorhynchus_anatinus
ENSPVAG00000007593	RC3H1	99	87.545	ENSOCUG00000004930	RC3H1	93	100.000	Oryctolagus_cuniculus
ENSPVAG00000007593	RC3H1	100	85.450	ENSOGAG00000004044	RC3H1	94	100.000	Otolemur_garnettii
ENSPVAG00000007593	RC3H1	100	87.368	ENSOARG00000013011	RC3H1	100	87.368	Ovis_aries
ENSPVAG00000007593	RC3H1	100	88.183	ENSPPAG00000039253	RC3H1	100	88.183	Pan_paniscus
ENSPVAG00000007593	RC3H1	100	87.544	ENSPPRG00000009007	RC3H1	94	100.000	Panthera_pardus
ENSPVAG00000007593	RC3H1	100	87.951	ENSPTIG00000015326	RC3H1	100	87.951	Panthera_tigris_altaica
ENSPVAG00000007593	RC3H1	100	88.183	ENSPTRG00000001702	RC3H1	100	88.183	Pan_troglodytes
ENSPVAG00000007593	RC3H1	100	88.085	ENSPANG00000008886	RC3H1	100	88.085	Papio_anubis
ENSPVAG00000007593	RC3H1	100	81.212	ENSPSIG00000016181	RC3H1	100	80.685	Pelodiscus_sinensis
ENSPVAG00000007593	RC3H1	100	84.806	ENSPEMG00000011966	Rc3h1	100	84.452	Peromyscus_maniculatus_bairdii
ENSPVAG00000007593	RC3H1	72	81.572	ENSPCIG00000002058	RC3H1	91	100.000	Phascolarctos_cinereus
ENSPVAG00000007593	RC3H1	100	84.819	ENSPPYG00000000490	RC3H1	98	87.081	Pongo_abelii
ENSPVAG00000007593	RC3H1	74	100.000	ENSPCAG00000010775	RC3H1	80	100.000	Procavia_capensis
ENSPVAG00000007593	RC3H1	89	85.882	ENSPCOG00000021795	RC3H1	93	100.000	Propithecus_coquereli
ENSPVAG00000007593	RC3H1	97	55.654	ENSPNAG00000023439	rc3h1a	81	90.083	Pygocentrus_nattereri
ENSPVAG00000007593	RC3H1	100	88.095	ENSRBIG00000037743	RC3H1	100	88.095	Rhinopithecus_bieti
ENSPVAG00000007593	RC3H1	100	87.996	ENSRROG00000036546	RC3H1	100	87.996	Rhinopithecus_roxellana
ENSPVAG00000007593	RC3H1	93	78.673	ENSSBOG00000010664	RC3H1	93	100.000	Saimiri_boliviensis_boliviensis
ENSPVAG00000007593	RC3H1	100	82.026	ENSSHAG00000007589	RC3H1	100	82.026	Sarcophilus_harrisii
ENSPVAG00000007593	RC3H1	87	77.039	ENSSARG00000004660	RC3H1	86	76.623	Sorex_araneus
ENSPVAG00000007593	RC3H1	100	76.424	ENSSPUG00000018472	RC3H1	100	75.789	Sphenodon_punctatus
ENSPVAG00000007593	RC3H1	100	88.428	ENSSSCG00000015498	RC3H1	94	100.000	Sus_scrofa
ENSPVAG00000007593	RC3H1	100	79.982	ENSTGUG00000004090	RC3H1	100	79.262	Taeniopygia_guttata
ENSPVAG00000007593	RC3H1	93	85.517	ENSTBEG00000005015	RC3H1	93	85.517	Tupaia_belangeri
ENSPVAG00000007593	RC3H1	100	87.489	ENSTTRG00000008572	RC3H1	100	87.489	Tursiops_truncatus
ENSPVAG00000007593	RC3H1	100	87.633	ENSUAMG00000019525	RC3H1	100	87.633	Ursus_americanus
ENSPVAG00000007593	RC3H1	100	88.173	ENSUMAG00000020087	RC3H1	100	88.173	Ursus_maritimus
ENSPVAG00000007593	RC3H1	86	100.000	ENSVPAG00000002591	RC3H1	86	100.000	Vicugna_pacos
ENSPVAG00000007593	RC3H1	100	87.676	ENSVVUG00000014201	RC3H1	100	87.676	Vulpes_vulpes
ENSPVAG00000007593	RC3H1	100	71.603	ENSXETG00000020030	rc3h1	100	70.968	Xenopus_tropicalis