EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPVAG00000008225 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Pteropus_vampyrus
Status
putative
Strand
Minus strand
Length
20042 bases
Position
chrGeneScaffold_3853:1091095-1111136
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPVAP00000007772CSDPF00313.227.1e-8515
ENSPVAP00000007772CSDPF00313.227.1e-8525
ENSPVAP00000007772CSDPF00313.227.1e-8535
ENSPVAP00000007772CSDPF00313.227.1e-8545
ENSPVAP00000007772CSDPF00313.227.1e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPVAT00000008225CSDE1-2012436-ENSPVAP00000007772811 (aa)-UPI00018B4E97
Gene Model
Click here to download ENSPVAG00000008225's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000008225's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPVAG00000008225CSDE110092.743ENSG00000009307CSDE1100100.000Homo_sapiens
ENSPVAG00000008225CSDE19572.597ENSAPOG00000015538csde110072.597Acanthochromis_polyacanthus
ENSPVAG00000008225CSDE110091.769ENSAMEG00000017129CSDE110091.769Ailuropoda_melanoleuca
ENSPVAG00000008225CSDE18275.946ENSACIG00000015175csde110075.946Amphilophus_citrinellus
ENSPVAG00000008225CSDE19572.727ENSAOCG00000011510csde110072.727Amphiprion_ocellaris
ENSPVAG00000008225CSDE19968.810ENSAPEG00000007194csde110072.727Amphiprion_percula
ENSPVAG00000008225CSDE19572.078ENSATEG00000003864csde110072.078Anabas_testudineus
ENSPVAG00000008225CSDE19586.310ENSAPLG00000008797CSDE110086.310Anas_platyrhynchos
ENSPVAG00000008225CSDE19582.957ENSACAG00000003120CSDE110082.957Anolis_carolinensis
ENSPVAG00000008225CSDE18472.340ENSANAG00000028396-8872.340Aotus_nancymaae
ENSPVAG00000008225CSDE110092.374ENSANAG00000024665CSDE110092.374Aotus_nancymaae
ENSPVAG00000008225CSDE19572.172ENSACLG00000013296csde110072.172Astatotilapia_calliptera
ENSPVAG00000008225CSDE18776.793ENSAMXG00000007436csde110071.984Astyanax_mexicanus
ENSPVAG00000008225CSDE110088.863ENSBTAG00000000678CSDE110092.438Bos_taurus
ENSPVAG00000008225CSDE110092.497ENSCJAG00000012565CSDE110092.497Callithrix_jacchus
ENSPVAG00000008225CSDE19398.141ENSCAFG00000009618CSDE19498.141Canis_familiaris
ENSPVAG00000008225CSDE19592.960ENSCAFG00020000481CSDE110092.960Canis_lupus_dingo
ENSPVAG00000008225CSDE110092.128ENSCHIG00000017250CSDE110092.438Capra_hircus
ENSPVAG00000008225CSDE110088.836ENSTSYG00000003747CSDE110092.568Carlito_syrichta
ENSPVAG00000008225CSDE19564.573ENSCAPG00000015128CSDE110072.962Cavia_aperea
ENSPVAG00000008225CSDE19586.692ENSCPOG00000040388CSDE110086.692Cavia_porcellus
ENSPVAG00000008225CSDE18479.944ENSCCAG00000033677-9378.989Cebus_capucinus
ENSPVAG00000008225CSDE110092.497ENSCCAG00000036794CSDE110092.497Cebus_capucinus
ENSPVAG00000008225CSDE18377.922ENSCCAG00000030878-8277.922Cebus_capucinus
ENSPVAG00000008225CSDE110092.743ENSCATG00000036962CSDE110092.743Cercocebus_atys
ENSPVAG00000008225CSDE19592.829ENSCLAG00000006618CSDE110092.829Chinchilla_lanigera
ENSPVAG00000008225CSDE110089.336ENSCSAG00000001658CSDE110089.336Chlorocebus_sabaeus
ENSPVAG00000008225CSDE1100100.000ENSCHOG00000000918CSDE195100.000Choloepus_hoffmanni
ENSPVAG00000008225CSDE19586.310ENSCPBG00000016547CSDE110086.310Chrysemys_picta_bellii
ENSPVAG00000008225CSDE18542.216ENSCING00000014465-9042.216Ciona_intestinalis
ENSPVAG00000008225CSDE18541.667ENSCSAVG00000008100-9341.667Ciona_savignyi
ENSPVAG00000008225CSDE18494.424ENSCANG00000031069-9494.424Colobus_angolensis_palliatus
ENSPVAG00000008225CSDE110092.620ENSCANG00000035096CSDE110092.620Colobus_angolensis_palliatus
ENSPVAG00000008225CSDE19575.489ENSCGRG00001014011-10075.489Cricetulus_griseus_chok1gshd
ENSPVAG00000008225CSDE19592.568ENSCGRG00001016833-10092.568Cricetulus_griseus_chok1gshd
ENSPVAG00000008225CSDE19188.419ENSCGRG00000002225-10088.419Cricetulus_griseus_crigri
ENSPVAG00000008225CSDE19584.783ENSCGRG00000005831-10084.783Cricetulus_griseus_crigri
ENSPVAG00000008225CSDE19572.432ENSCSEG00000002620csde110072.432Cynoglossus_semilaevis
ENSPVAG00000008225CSDE19571.818ENSCVAG00000001344csde110071.818Cyprinodon_variegatus
ENSPVAG00000008225CSDE110067.356ENSDARG00000074758csde110074.339Danio_rerio
ENSPVAG00000008225CSDE19592.228ENSDNOG00000010287-9492.228Dasypus_novemcinctus
ENSPVAG00000008225CSDE17570.722ENSDNOG00000034464-10070.722Dasypus_novemcinctus
ENSPVAG00000008225CSDE19491.018ENSDORG00000011609Csde110091.018Dipodomys_ordii
ENSPVAG00000008225CSDE18647.541FBgn0263352Unr7147.177Drosophila_melanogaster
ENSPVAG00000008225CSDE19472.585ENSETEG00000013678-9972.585Echinops_telfairi
ENSPVAG00000008225CSDE18586.709ENSETEG00000006280-10086.709Echinops_telfairi
ENSPVAG00000008225CSDE16767.831ENSETEG00000007109-9067.831Echinops_telfairi
ENSPVAG00000008225CSDE19397.521ENSETEG00000002491-8097.521Echinops_telfairi
ENSPVAG00000008225CSDE18754.557ENSEBUG00000008647csde19352.746Eptatretus_burgeri
ENSPVAG00000008225CSDE110092.232ENSEASG00005006284CSDE110092.232Equus_asinus_asinus
ENSPVAG00000008225CSDE110092.232ENSECAG00000020885CSDE110092.232Equus_caballus
ENSPVAG00000008225CSDE19399.476ENSEEUG00000006286CSDE17499.476Erinaceus_europaeus
ENSPVAG00000008225CSDE19570.893ENSELUG00000015507csde110070.893Esox_lucius
ENSPVAG00000008225CSDE110092.989ENSFCAG00000029266CSDE110093.220Felis_catus
ENSPVAG00000008225CSDE19583.333ENSFALG00000003407CSDE110083.333Ficedula_albicollis
ENSPVAG00000008225CSDE19492.066ENSFDAG00000007882CSDE110092.066Fukomys_damarensis
ENSPVAG00000008225CSDE19868.182ENSFHEG00000010799csde19476.479Fundulus_heteroclitus
ENSPVAG00000008225CSDE19469.511ENSGMOG00000012731csde110069.511Gadus_morhua
ENSPVAG00000008225CSDE18787.669ENSGALG00000002139CSDE19387.669Gallus_gallus
ENSPVAG00000008225CSDE18776.220ENSGAFG00000005241csde19576.220Gambusia_affinis
ENSPVAG00000008225CSDE19470.050ENSGACG00000004544csde110070.050Gasterosteus_aculeatus
ENSPVAG00000008225CSDE110084.398ENSGAGG00000017685CSDE110085.012Gopherus_agassizii
ENSPVAG00000008225CSDE110092.743ENSGGOG00000002164CSDE110092.829Gorilla_gorilla
ENSPVAG00000008225CSDE19572.172ENSHBUG00000020315csde110072.172Haplochromis_burtoni
ENSPVAG00000008225CSDE19575.379ENSHGLG00000019549-10075.379Heterocephalus_glaber_female
ENSPVAG00000008225CSDE19583.572ENSHGLG00000003829-10083.572Heterocephalus_glaber_female
ENSPVAG00000008225CSDE19582.920ENSHGLG00000009620-10083.181Heterocephalus_glaber_female
ENSPVAG00000008225CSDE19471.016ENSHGLG00000000650-9971.016Heterocephalus_glaber_female
ENSPVAG00000008225CSDE19484.731ENSHGLG00000008555-10084.731Heterocephalus_glaber_female
ENSPVAG00000008225CSDE18786.139ENSHGLG00000007471-9286.139Heterocephalus_glaber_female
ENSPVAG00000008225CSDE18295.135ENSHGLG00000010039-8695.135Heterocephalus_glaber_female
ENSPVAG00000008225CSDE18294.865ENSHGLG00100006910-8694.865Heterocephalus_glaber_male
ENSPVAG00000008225CSDE19475.344ENSHGLG00100002245-9975.344Heterocephalus_glaber_male
ENSPVAG00000008225CSDE18783.593ENSHGLG00100004195-9983.593Heterocephalus_glaber_male
ENSPVAG00000008225CSDE19592.960ENSHGLG00100019438-10092.960Heterocephalus_glaber_male
ENSPVAG00000008225CSDE19580.834ENSHGLG00100012072-10080.834Heterocephalus_glaber_male
ENSPVAG00000008225CSDE18783.168ENSHGLG00100007287-9283.168Heterocephalus_glaber_male
ENSPVAG00000008225CSDE19575.130ENSHGLG00100001846-9679.972Heterocephalus_glaber_male
ENSPVAG00000008225CSDE19174.165ENSHGLG00100004833-10074.165Heterocephalus_glaber_male
ENSPVAG00000008225CSDE19571.299ENSHCOG00000004158csde110071.261Hippocampus_comes
ENSPVAG00000008225CSDE19571.984ENSIPUG00000000355csde110071.984Ictalurus_punctatus
ENSPVAG00000008225CSDE19575.192ENSSTOG00000030994-10075.192Ictidomys_tridecemlineatus
ENSPVAG00000008225CSDE19093.007ENSSTOG00000032722-9893.007Ictidomys_tridecemlineatus
ENSPVAG00000008225CSDE19491.168ENSJJAG00000019571Csde110091.168Jaculus_jaculus
ENSPVAG00000008225CSDE19968.252ENSKMAG00000005685csde110068.897Kryptolebias_marmoratus
ENSPVAG00000008225CSDE19572.468ENSLBEG00000014770csde110072.468Labrus_bergylta
ENSPVAG00000008225CSDE19770.133ENSLACG00000018452CSDE19670.280Latimeria_chalumnae
ENSPVAG00000008225CSDE110070.588ENSLOCG00000010413csde19672.380Lepisosteus_oculatus
ENSPVAG00000008225CSDE19591.051ENSLAFG00000007150CSDE19691.051Loxodonta_africana
ENSPVAG00000008225CSDE110092.743ENSMFAG00000003674CSDE110092.829Macaca_fascicularis
ENSPVAG00000008225CSDE110092.743ENSMMUG00000001974CSDE19998.586Macaca_mulatta
ENSPVAG00000008225CSDE110092.743ENSMNEG00000045247CSDE110092.743Macaca_nemestrina
ENSPVAG00000008225CSDE110092.497ENSMLEG00000038673CSDE110092.497Mandrillus_leucophaeus
ENSPVAG00000008225CSDE19573.247ENSMAMG00000008821csde110073.247Mastacembelus_armatus
ENSPVAG00000008225CSDE19572.172ENSMZEG00005021675csde110072.172Maylandia_zebra
ENSPVAG00000008225CSDE19586.068ENSMGAG00000016381CSDE110086.068Meleagris_gallopavo
ENSPVAG00000008225CSDE19491.617ENSMAUG00000014031Csde110091.617Mesocricetus_auratus
ENSPVAG00000008225CSDE110092.128ENSMICG00000002050CSDE110092.128Microcebus_murinus
ENSPVAG00000008225CSDE19592.438ENSMOCG00000018960Csde110092.438Microtus_ochrogaster
ENSPVAG00000008225CSDE19572.727ENSMMOG00000015075csde110072.727Mola_mola
ENSPVAG00000008225CSDE19588.745ENSMODG00000004685CSDE110086.341Monodelphis_domestica
ENSPVAG00000008225CSDE19572.597ENSMALG00000007132csde110072.597Monopterus_albus
ENSPVAG00000008225CSDE19592.308MGP_CAROLIEiJ_G0025444Csde110098.013Mus_caroli
ENSPVAG00000008225CSDE19592.308ENSMUSG00000068823Csde110098.013Mus_musculus
ENSPVAG00000008225CSDE19592.568MGP_PahariEiJ_G0026888Csde110098.013Mus_pahari
ENSPVAG00000008225CSDE19592.568MGP_SPRETEiJ_G0026394Csde110098.013Mus_spretus
ENSPVAG00000008225CSDE18794.851ENSMPUG00000005753CSDE19494.851Mustela_putorius_furo
ENSPVAG00000008225CSDE110091.882ENSMLUG00000005681CSDE110091.882Myotis_lucifugus
ENSPVAG00000008225CSDE19491.467ENSNGAG00000021929Csde110091.467Nannospalax_galili
ENSPVAG00000008225CSDE18471.465ENSNGAG00000012599-8571.465Nannospalax_galili
ENSPVAG00000008225CSDE19572.172ENSNBRG00000020808csde110072.172Neolamprologus_brichardi
ENSPVAG00000008225CSDE110092.620ENSNLEG00000004842CSDE110092.620Nomascus_leucogenys
ENSPVAG00000008225CSDE18790.806ENSMEUG00000002677CSDE19490.806Notamacropus_eugenii
ENSPVAG00000008225CSDE19393.464ENSOPRG00000005002CSDE18293.464Ochotona_princeps
ENSPVAG00000008225CSDE19158.850ENSODEG00000005979-9858.850Octodon_degus
ENSPVAG00000008225CSDE19491.617ENSODEG00000007383-10091.617Octodon_degus
ENSPVAG00000008225CSDE19567.931ENSONIG00000009309csde110067.931Oreochromis_niloticus
ENSPVAG00000008225CSDE18788.275ENSOANG00000003346-7688.275Ornithorhynchus_anatinus
ENSPVAG00000008225CSDE110088.507ENSOCUG00000016438CSDE110088.507Oryctolagus_cuniculus
ENSPVAG00000008225CSDE19572.432ENSORLG00000000707csde110072.432Oryzias_latipes
ENSPVAG00000008225CSDE19968.383ENSORLG00020005148csde110067.931Oryzias_latipes_hni
ENSPVAG00000008225CSDE19968.503ENSORLG00015019415csde110072.432Oryzias_latipes_hsok
ENSPVAG00000008225CSDE19572.857ENSOMEG00000015656csde110072.857Oryzias_melastigma
ENSPVAG00000008225CSDE110092.620ENSOGAG00000012127CSDE110092.620Otolemur_garnettii
ENSPVAG00000008225CSDE110092.251ENSOARG00000020034CSDE110092.251Ovis_aries
ENSPVAG00000008225CSDE110092.743ENSPPAG00000025861CSDE110092.829Pan_paniscus
ENSPVAG00000008225CSDE110092.989ENSPPRG00000006747CSDE110092.989Panthera_pardus
ENSPVAG00000008225CSDE110092.989ENSPTIG00000015468CSDE110092.989Panthera_tigris_altaica
ENSPVAG00000008225CSDE110092.743ENSPTRG00000033721CSDE110092.743Pan_troglodytes
ENSPVAG00000008225CSDE110092.743ENSPANG00000018873CSDE110092.829Papio_anubis
ENSPVAG00000008225CSDE19571.651ENSPKIG00000009459csde110071.651Paramormyrops_kingsleyae
ENSPVAG00000008225CSDE18787.611ENSPSIG00000003823CSDE19687.611Pelodiscus_sinensis
ENSPVAG00000008225CSDE19572.078ENSPMGG00000000772csde110072.078Periophthalmus_magnuspinnatus
ENSPVAG00000008225CSDE19491.467ENSPEMG00000020357-10091.467Peromyscus_maniculatus_bairdii
ENSPVAG00000008225CSDE110084.652ENSPCIG00000022587CSDE110086.466Phascolarctos_cinereus
ENSPVAG00000008225CSDE19469.255ENSPFOG00000012664csde110069.720Poecilia_formosa
ENSPVAG00000008225CSDE18670.016ENSPLAG00000017680csde18770.016Poecilia_latipinna
ENSPVAG00000008225CSDE18670.181ENSPMEG00000005094csde18970.181Poecilia_mexicana
ENSPVAG00000008225CSDE19967.500ENSPREG00000011631csde110066.667Poecilia_reticulata
ENSPVAG00000008225CSDE19589.098ENSPPYG00000000996CSDE110089.098Pongo_abelii
ENSPVAG00000008225CSDE110087.315ENSPCAG00000014368CSDE110087.808Procavia_capensis
ENSPVAG00000008225CSDE19592.829ENSPCOG00000017893CSDE110092.829Propithecus_coquereli
ENSPVAG00000008225CSDE18581.022ENSPCOG00000008223-9281.022Propithecus_coquereli
ENSPVAG00000008225CSDE19572.172ENSPNYG00000013745csde110072.172Pundamilia_nyererei
ENSPVAG00000008225CSDE18777.606ENSPNAG00000001958csde19277.606Pygocentrus_nattereri
ENSPVAG00000008225CSDE19588.847ENSRNOG00000061058Csde110088.847Rattus_norvegicus
ENSPVAG00000008225CSDE110087.362ENSRBIG00000038966-10087.362Rhinopithecus_bieti
ENSPVAG00000008225CSDE19589.453ENSRBIG00000038088-10089.453Rhinopithecus_bieti
ENSPVAG00000008225CSDE110092.743ENSRROG00000043101CSDE110092.743Rhinopithecus_roxellana
ENSPVAG00000008225CSDE110092.497ENSSBOG00000035592CSDE110092.497Saimiri_boliviensis_boliviensis
ENSPVAG00000008225CSDE110087.745ENSSHAG00000009831CSDE110089.831Sarcophilus_harrisii
ENSPVAG00000008225CSDE19572.172ENSSFOG00015007498csde110072.172Scleropages_formosus
ENSPVAG00000008225CSDE19572.987ENSSMAG00000007203csde110072.987Scophthalmus_maximus
ENSPVAG00000008225CSDE19572.597ENSSDUG00000015380csde110072.597Seriola_dumerili
ENSPVAG00000008225CSDE19572.597ENSSLDG00000008819csde110072.597Seriola_lalandi_dorsalis
ENSPVAG00000008225CSDE110090.786ENSSARG00000000738CSDE110090.786Sorex_araneus
ENSPVAG00000008225CSDE19585.789ENSSPUG00000008714CSDE110085.789Sphenodon_punctatus
ENSPVAG00000008225CSDE19968.929ENSSPAG00000000716csde110072.597Stegastes_partitus
ENSPVAG00000008225CSDE110088.981ENSSSCG00000006752CSDE110092.699Sus_scrofa
ENSPVAG00000008225CSDE19582.375ENSTGUG00000000972CSDE110082.375Taeniopygia_guttata
ENSPVAG00000008225CSDE19570.351ENSTRUG00000007996csde110070.351Takifugu_rubripes
ENSPVAG00000008225CSDE18772.414ENSTNIG00000010878csde110072.414Tetraodon_nigroviridis
ENSPVAG00000008225CSDE179100.000ENSTBEG00000011880-53100.000Tupaia_belangeri
ENSPVAG00000008225CSDE110091.882ENSTTRG00000015583CSDE110091.882Tursiops_truncatus
ENSPVAG00000008225CSDE18494.203ENSUAMG00000024289-9994.203Ursus_americanus
ENSPVAG00000008225CSDE18198.071ENSUAMG00000021779-10098.071Ursus_americanus
ENSPVAG00000008225CSDE18188.599ENSUMAG00000011714-9988.599Ursus_maritimus
ENSPVAG00000008225CSDE19587.160ENSUMAG00000009720-9887.160Ursus_maritimus
ENSPVAG00000008225CSDE110096.835ENSVPAG00000000749CSDE18596.835Vicugna_pacos
ENSPVAG00000008225CSDE18794.152ENSVVUG00000009890CSDE19494.152Vulpes_vulpes
ENSPVAG00000008225CSDE19577.403ENSXETG00000021448csde110077.403Xenopus_tropicalis
ENSPVAG00000008225CSDE18785.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSPVAG00000008225CSDE19968.690ENSXMAG00000009080csde19276.901Xiphophorus_maculatus

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