EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000008446 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 6006 bases
Position: chrGeneScaffold_2976:280133-286138
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000007975	tRNA_int_end_N2	PF12928.7	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000008445	TSEN54-201	1596	-	ENSPVAP00000007975	531 (aa)	-	UPI00018B4D93

Gene Model

Click here to download ENSPVAG00000008446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000008446's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000008446	TSEN54	100	84.934	ENSG00000182173	TSEN54	100	95.833	Homo_sapiens
ENSPVAG00000008446	TSEN54	97	46.498	ENSAPOG00000009659	tsen54	99	43.750	Acanthochromis_polyacanthus
ENSPVAG00000008446	TSEN54	99	88.491	ENSAMEG00000009414	TSEN54	99	88.491	Ailuropoda_melanoleuca
ENSPVAG00000008446	TSEN54	97	46.498	ENSAOCG00000000152	tsen54	95	46.228	Amphiprion_ocellaris
ENSPVAG00000008446	TSEN54	97	45.914	ENSAPEG00000018931	tsen54	94	45.648	Amphiprion_percula
ENSPVAG00000008446	TSEN54	97	43.870	ENSATEG00000019860	tsen54	97	43.619	Anabas_testudineus
ENSPVAG00000008446	TSEN54	86	53.261	ENSAPLG00000009419	TSEN54	100	53.261	Anas_platyrhynchos
ENSPVAG00000008446	TSEN54	99	50.743	ENSACAG00000006714	TSEN54	99	51.756	Anolis_carolinensis
ENSPVAG00000008446	TSEN54	99	85.496	ENSANAG00000024061	TSEN54	99	85.094	Aotus_nancymaae
ENSPVAG00000008446	TSEN54	97	45.298	ENSACLG00000019800	tsen54	96	44.828	Astatotilapia_calliptera
ENSPVAG00000008446	TSEN54	97	47.184	ENSAMXG00000006546	tsen54	96	47.184	Astyanax_mexicanus
ENSPVAG00000008446	TSEN54	100	86.817	ENSBTAG00000000824	TSEN54	100	86.817	Bos_taurus
ENSPVAG00000008446	TSEN54	99	83.969	ENSCJAG00000014278	TSEN54	99	83.585	Callithrix_jacchus
ENSPVAG00000008446	TSEN54	100	89.077	ENSCAFG00000004798	TSEN54	100	89.077	Canis_familiaris
ENSPVAG00000008446	TSEN54	100	89.077	ENSCAFG00020000312	TSEN54	100	89.077	Canis_lupus_dingo
ENSPVAG00000008446	TSEN54	100	84.746	ENSCHIG00000019908	TSEN54	100	84.746	Capra_hircus
ENSPVAG00000008446	TSEN54	86	83.261	ENSTSYG00000037439	TSEN54	100	83.261	Carlito_syrichta
ENSPVAG00000008446	TSEN54	99	84.160	ENSCCAG00000036624	TSEN54	99	83.774	Cebus_capucinus
ENSPVAG00000008446	TSEN54	97	84.913	ENSCATG00000042877	TSEN54	99	84.528	Cercocebus_atys
ENSPVAG00000008446	TSEN54	97	82.205	ENSCLAG00000002924	TSEN54	99	81.698	Chinchilla_lanigera
ENSPVAG00000008446	TSEN54	100	84.181	ENSCSAG00000004809	TSEN54	100	84.181	Chlorocebus_sabaeus
ENSPVAG00000008446	TSEN54	99	56.215	ENSCPBG00000028071	TSEN54	99	56.215	Chrysemys_picta_bellii
ENSPVAG00000008446	TSEN54	100	83.616	ENSCANG00000028053	TSEN54	100	83.616	Colobus_angolensis_palliatus
ENSPVAG00000008446	TSEN54	100	80.979	ENSCGRG00001020029	Tsen54	100	80.979	Cricetulus_griseus_chok1gshd
ENSPVAG00000008446	TSEN54	84	79.241	ENSCGRG00000016289	Tsen54	100	79.241	Cricetulus_griseus_crigri
ENSPVAG00000008446	TSEN54	81	38.813	ENSCSEG00000020586	tsen54	99	38.095	Cynoglossus_semilaevis
ENSPVAG00000008446	TSEN54	81	43.721	ENSDARG00000036844	tsen54	99	43.458	Danio_rerio
ENSPVAG00000008446	TSEN54	100	84.746	ENSDNOG00000018452	TSEN54	100	84.746	Dasypus_novemcinctus
ENSPVAG00000008446	TSEN54	100	82.863	ENSDORG00000004073	Tsen54	100	83.239	Dipodomys_ordii
ENSPVAG00000008446	TSEN54	97	35.609	ENSEBUG00000005203	TSEN54	95	35.860	Eptatretus_burgeri
ENSPVAG00000008446	TSEN54	100	88.324	ENSEASG00005000579	TSEN54	100	88.324	Equus_asinus_asinus
ENSPVAG00000008446	TSEN54	100	88.136	ENSECAG00000004924	TSEN54	100	88.136	Equus_caballus
ENSPVAG00000008446	TSEN54	86	83.370	ENSEEUG00000008467	TSEN54	100	83.370	Erinaceus_europaeus
ENSPVAG00000008446	TSEN54	97	44.275	ENSELUG00000017703	tsen54	90	43.511	Esox_lucius
ENSPVAG00000008446	TSEN54	99	89.394	ENSFCAG00000023712	TSEN54	99	89.394	Felis_catus
ENSPVAG00000008446	TSEN54	97	50.874	ENSFALG00000001119	TSEN54	96	52.124	Ficedula_albicollis
ENSPVAG00000008446	TSEN54	86	82.713	ENSFDAG00000019090	TSEN54	99	82.713	Fukomys_damarensis
ENSPVAG00000008446	TSEN54	97	47.953	ENSFHEG00000005470	tsen54	96	47.953	Fundulus_heteroclitus
ENSPVAG00000008446	TSEN54	75	45.833	ENSGMOG00000013146	tsen54	82	45.833	Gadus_morhua
ENSPVAG00000008446	TSEN54	95	50.097	ENSGALG00000047163	TSEN54	98	50.097	Gallus_gallus
ENSPVAG00000008446	TSEN54	99	46.792	ENSGAFG00000005111	tsen54	99	46.415	Gambusia_affinis
ENSPVAG00000008446	TSEN54	96	44.722	ENSGACG00000014987	tsen54	99	44.146	Gasterosteus_aculeatus
ENSPVAG00000008446	TSEN54	100	55.185	ENSGAGG00000006825	TSEN54	99	55.185	Gopherus_agassizii
ENSPVAG00000008446	TSEN54	97	85.185	ENSGGOG00000009417	TSEN54	100	85.185	Gorilla_gorilla
ENSPVAG00000008446	TSEN54	87	43.644	ENSHBUG00000018296	tsen54	99	37.327	Haplochromis_burtoni
ENSPVAG00000008446	TSEN54	100	83.239	ENSHGLG00000007979	TSEN54	100	83.239	Heterocephalus_glaber_female
ENSPVAG00000008446	TSEN54	100	82.298	ENSHGLG00100005497	TSEN54	100	82.298	Heterocephalus_glaber_male
ENSPVAG00000008446	TSEN54	81	42.045	ENSHCOG00000007481	tsen54	99	41.309	Hippocampus_comes
ENSPVAG00000008446	TSEN54	75	61.176	ENSIPUG00000000590	tsen54	79	61.176	Ictalurus_punctatus
ENSPVAG00000008446	TSEN54	100	79.661	ENSSTOG00000012883	TSEN54	100	79.661	Ictidomys_tridecemlineatus
ENSPVAG00000008446	TSEN54	100	81.051	ENSJJAG00000007365	Tsen54	100	81.051	Jaculus_jaculus
ENSPVAG00000008446	TSEN54	97	45.455	ENSKMAG00000006944	tsen54	97	44.821	Kryptolebias_marmoratus
ENSPVAG00000008446	TSEN54	97	44.466	ENSLBEG00000004199	tsen54	97	44.023	Labrus_bergylta
ENSPVAG00000008446	TSEN54	97	45.541	ENSLACG00000009497	TSEN54	100	45.541	Latimeria_chalumnae
ENSPVAG00000008446	TSEN54	99	48.087	ENSLOCG00000011191	tsen54	99	48.094	Lepisosteus_oculatus
ENSPVAG00000008446	TSEN54	100	80.603	ENSLAFG00000011655	TSEN54	100	80.603	Loxodonta_africana
ENSPVAG00000008446	TSEN54	100	84.369	ENSMFAG00000000712	TSEN54	100	84.369	Macaca_fascicularis
ENSPVAG00000008446	TSEN54	100	84.181	ENSMNEG00000029199	TSEN54	100	84.181	Macaca_nemestrina
ENSPVAG00000008446	TSEN54	86	83.807	ENSMLEG00000044168	TSEN54	88	83.807	Mandrillus_leucophaeus
ENSPVAG00000008446	TSEN54	79	58.549	ENSMAMG00000019773	tsen54	98	44.213	Mastacembelus_armatus
ENSPVAG00000008446	TSEN54	97	45.298	ENSMZEG00005000884	tsen54	96	44.828	Maylandia_zebra
ENSPVAG00000008446	TSEN54	98	49.432	ENSMGAG00000009556	TSEN54	97	50.189	Meleagris_gallopavo
ENSPVAG00000008446	TSEN54	100	81.356	ENSMAUG00000016838	Tsen54	100	81.356	Mesocricetus_auratus
ENSPVAG00000008446	TSEN54	100	84.746	ENSMICG00000044012	TSEN54	100	84.746	Microcebus_murinus
ENSPVAG00000008446	TSEN54	100	81.921	ENSMOCG00000021585	Tsen54	100	81.921	Microtus_ochrogaster
ENSPVAG00000008446	TSEN54	96	42.412	ENSMMOG00000020189	tsen54	98	42.802	Mola_mola
ENSPVAG00000008446	TSEN54	98	69.623	ENSMODG00000007438	TSEN54	98	69.331	Monodelphis_domestica
ENSPVAG00000008446	TSEN54	97	45.731	ENSMALG00000020573	tsen54	97	44.528	Monopterus_albus
ENSPVAG00000008446	TSEN54	100	79.096	MGP_CAROLIEiJ_G0017417	Tsen54	100	79.096	Mus_caroli
ENSPVAG00000008446	TSEN54	100	79.473	ENSMUSG00000020781	Tsen54	100	79.473	Mus_musculus
ENSPVAG00000008446	TSEN54	100	79.284	MGP_PahariEiJ_G0018547	Tsen54	100	79.284	Mus_pahari
ENSPVAG00000008446	TSEN54	100	79.661	MGP_SPRETEiJ_G0018262	Tsen54	100	79.661	Mus_spretus
ENSPVAG00000008446	TSEN54	100	87.759	ENSMPUG00000013870	TSEN54	100	87.759	Mustela_putorius_furo
ENSPVAG00000008446	TSEN54	100	84.369	ENSMLUG00000015298	TSEN54	100	84.369	Myotis_lucifugus
ENSPVAG00000008446	TSEN54	100	80.791	ENSNGAG00000015673	Tsen54	100	80.791	Nannospalax_galili
ENSPVAG00000008446	TSEN54	89	65.890	ENSMEUG00000011908	TSEN54	100	65.890	Notamacropus_eugenii
ENSPVAG00000008446	TSEN54	99	74.340	ENSOPRG00000012513	TSEN54	99	74.340	Ochotona_princeps
ENSPVAG00000008446	TSEN54	97	45.489	ENSONIG00000009543	tsen54	96	45.019	Oreochromis_niloticus
ENSPVAG00000008446	TSEN54	99	75.279	ENSOCUG00000009875	TSEN54	99	75.279	Oryctolagus_cuniculus
ENSPVAG00000008446	TSEN54	97	45.136	ENSORLG00000000852	tsen54	97	44.553	Oryzias_latipes
ENSPVAG00000008446	TSEN54	97	44.358	ENSORLG00020018221	tsen54	97	44.358	Oryzias_latipes_hni
ENSPVAG00000008446	TSEN54	97	44.358	ENSORLG00015009413	tsen54	98	44.358	Oryzias_latipes_hsok
ENSPVAG00000008446	TSEN54	97	45.543	ENSOMEG00000014402	tsen54	94	44.961	Oryzias_melastigma
ENSPVAG00000008446	TSEN54	100	79.284	ENSOGAG00000001442	TSEN54	100	79.284	Otolemur_garnettii
ENSPVAG00000008446	TSEN54	86	84.902	ENSOARG00000010361	TSEN54	100	84.902	Ovis_aries
ENSPVAG00000008446	TSEN54	95	84.064	ENSPPAG00000043519	TSEN54	100	84.462	Pan_paniscus
ENSPVAG00000008446	TSEN54	99	89.015	ENSPPRG00000009162	TSEN54	99	89.015	Panthera_pardus
ENSPVAG00000008446	TSEN54	86	87.527	ENSPTIG00000019312	TSEN54	96	87.527	Panthera_tigris_altaica
ENSPVAG00000008446	TSEN54	100	84.746	ENSPTRG00000009646	TSEN54	100	84.746	Pan_troglodytes
ENSPVAG00000008446	TSEN54	99	84.151	ENSPANG00000020133	TSEN54	99	84.470	Papio_anubis
ENSPVAG00000008446	TSEN54	97	45.766	ENSPKIG00000023018	tsen54	100	45.578	Paramormyrops_kingsleyae
ENSPVAG00000008446	TSEN54	80	53.241	ENSPSIG00000012807	TSEN54	99	53.241	Pelodiscus_sinensis
ENSPVAG00000008446	TSEN54	92	36.694	ENSPMGG00000019578	tsen54	99	35.887	Periophthalmus_magnuspinnatus
ENSPVAG00000008446	TSEN54	100	82.298	ENSPEMG00000014857	Tsen54	100	82.298	Peromyscus_maniculatus_bairdii
ENSPVAG00000008446	TSEN54	99	47.368	ENSPFOG00000022740	tsen54	99	46.992	Poecilia_formosa
ENSPVAG00000008446	TSEN54	99	47.448	ENSPLAG00000014847	tsen54	99	47.070	Poecilia_latipinna
ENSPVAG00000008446	TSEN54	99	47.259	ENSPMEG00000022876	tsen54	99	46.881	Poecilia_mexicana
ENSPVAG00000008446	TSEN54	99	46.516	ENSPREG00000013090	tsen54	99	45.981	Poecilia_reticulata
ENSPVAG00000008446	TSEN54	91	78.099	ENSPPYG00000008629	TSEN54	100	78.306	Pongo_abelii
ENSPVAG00000008446	TSEN54	95	72.925	ENSPCAG00000002093	TSEN54	99	72.925	Procavia_capensis
ENSPVAG00000008446	TSEN54	99	88.258	ENSPCOG00000027880	TSEN54	99	88.258	Propithecus_coquereli
ENSPVAG00000008446	TSEN54	92	44.910	ENSPNYG00000010217	tsen54	99	44.422	Pundamilia_nyererei
ENSPVAG00000008446	TSEN54	99	46.642	ENSPNAG00000003770	tsen54	99	46.629	Pygocentrus_nattereri
ENSPVAG00000008446	TSEN54	100	79.849	ENSRNOG00000004598	Tsen54	100	79.849	Rattus_norvegicus
ENSPVAG00000008446	TSEN54	100	83.804	ENSRBIG00000043040	TSEN54	100	83.804	Rhinopithecus_bieti
ENSPVAG00000008446	TSEN54	100	83.427	ENSRROG00000030797	TSEN54	100	83.427	Rhinopithecus_roxellana
ENSPVAG00000008446	TSEN54	99	80.755	ENSSBOG00000013543	TSEN54	99	80.755	Saimiri_boliviensis_boliviensis
ENSPVAG00000008446	TSEN54	99	68.352	ENSSHAG00000018127	TSEN54	98	68.352	Sarcophilus_harrisii
ENSPVAG00000008446	TSEN54	81	44.292	ENSSFOG00015004093	tsen54	100	44.521	Scleropages_formosus
ENSPVAG00000008446	TSEN54	97	46.228	ENSSDUG00000021506	tsen54	97	45.577	Seriola_dumerili
ENSPVAG00000008446	TSEN54	97	46.035	ENSSLDG00000016303	tsen54	97	45.385	Seriola_lalandi_dorsalis
ENSPVAG00000008446	TSEN54	79	51.049	ENSSPUG00000008988	TSEN54	97	50.805	Sphenodon_punctatus
ENSPVAG00000008446	TSEN54	81	41.259	ENSSPAG00000008047	tsen54	99	40.741	Stegastes_partitus
ENSPVAG00000008446	TSEN54	92	44.689	ENSSPAG00000008098	-	99	44.223	Stegastes_partitus
ENSPVAG00000008446	TSEN54	100	88.324	ENSSSCG00000036852	TSEN54	100	88.324	Sus_scrofa
ENSPVAG00000008446	TSEN54	86	52.954	ENSTGUG00000008548	TSEN54	100	52.954	Taeniopygia_guttata
ENSPVAG00000008446	TSEN54	97	46.004	ENSTRUG00000004230	tsen54	96	46.199	Takifugu_rubripes
ENSPVAG00000008446	TSEN54	86	89.083	ENSTTRG00000015828	TSEN54	100	89.083	Tursiops_truncatus
ENSPVAG00000008446	TSEN54	81	88.372	ENSUAMG00000010045	TSEN54	100	88.372	Ursus_americanus
ENSPVAG00000008446	TSEN54	84	88.764	ENSUMAG00000008979	TSEN54	100	88.764	Ursus_maritimus
ENSPVAG00000008446	TSEN54	97	88.889	ENSVVUG00000011411	TSEN54	98	88.738	Vulpes_vulpes
ENSPVAG00000008446	TSEN54	98	48.762	ENSXETG00000012532	tsen54	99	71.667	Xenopus_tropicalis
ENSPVAG00000008446	TSEN54	97	37.765	ENSXCOG00000018245	tsen54	99	44.394	Xiphophorus_couchianus
ENSPVAG00000008446	TSEN54	99	47.448	ENSXMAG00000018818	tsen54	99	47.092	Xiphophorus_maculatus