EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPVAG00000008644 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Minus strand
Length: 372 bases
Position: chrGeneScaffold_207:116024-116395
Accession: 105290637
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000008157	LSM	PF01423.22	7.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000008641	LSM10-201	372	-	ENSPVAP00000008157	123 (aa)	XP_011356299	UPI00018B2DA4

Gene Model

Click here to download ENSPVAG00000008644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000008644's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPVAG00000008644	LSM10	55	30.000	ENSPVAG00000012405	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000008644	LSM10	100	91.057	ENSG00000181817	LSM10	100	91.057	Homo_sapiens
ENSPVAG00000008644	LSM10	100	91.870	ENSAMEG00000019854	LSM10	100	91.870	Ailuropoda_melanoleuca
ENSPVAG00000008644	LSM10	94	67.241	ENSACIG00000015420	oscp1a	77	67.241	Amphilophus_citrinellus
ENSPVAG00000008644	LSM10	96	69.492	ENSAOCG00000015618	LSM10	98	69.492	Amphiprion_ocellaris
ENSPVAG00000008644	LSM10	96	69.492	ENSAOCG00000014654	-	98	69.492	Amphiprion_ocellaris
ENSPVAG00000008644	LSM10	90	66.667	ENSAOCG00000015607	LSM10	86	66.667	Amphiprion_ocellaris
ENSPVAG00000008644	LSM10	96	69.492	ENSAPEG00000021845	-	98	69.492	Amphiprion_percula
ENSPVAG00000008644	LSM10	90	66.667	ENSAPEG00000021851	LSM10	86	66.667	Amphiprion_percula
ENSPVAG00000008644	LSM10	94	62.931	ENSATEG00000006310	oscp1a	86	62.931	Anabas_testudineus
ENSPVAG00000008644	LSM10	100	65.854	ENSACAG00000001231	LSM10	100	65.854	Anolis_carolinensis
ENSPVAG00000008644	LSM10	98	90.000	ENSANAG00000031489	-	98	90.000	Aotus_nancymaae
ENSPVAG00000008644	LSM10	100	90.244	ENSANAG00000018759	-	100	90.244	Aotus_nancymaae
ENSPVAG00000008644	LSM10	96	67.797	ENSACLG00000004728	oscp1a	96	67.797	Astatotilapia_calliptera
ENSPVAG00000008644	LSM10	96	68.644	ENSAMXG00000025301	oscp1a	98	68.644	Astyanax_mexicanus
ENSPVAG00000008644	LSM10	98	92.500	ENSBTAG00000024096	LSM10	98	92.500	Bos_taurus
ENSPVAG00000008644	LSM10	100	90.244	ENSCJAG00000044880	LSM10	100	90.244	Callithrix_jacchus
ENSPVAG00000008644	LSM10	100	95.122	ENSCAFG00000003382	LSM10	100	95.122	Canis_familiaris
ENSPVAG00000008644	LSM10	100	95.122	ENSCAFG00020008920	LSM10	100	95.122	Canis_lupus_dingo
ENSPVAG00000008644	LSM10	98	92.500	ENSCHIG00000009398	LSM10	98	92.500	Capra_hircus
ENSPVAG00000008644	LSM10	100	93.496	ENSCAPG00000012567	LSM10	100	93.496	Cavia_aperea
ENSPVAG00000008644	LSM10	100	93.496	ENSCPOG00000039302	LSM10	100	93.496	Cavia_porcellus
ENSPVAG00000008644	LSM10	98	90.000	ENSCCAG00000008378	-	98	90.000	Cebus_capucinus
ENSPVAG00000008644	LSM10	100	90.244	ENSCCAG00000018913	-	100	90.244	Cebus_capucinus
ENSPVAG00000008644	LSM10	100	91.057	ENSCATG00000006589	LSM10	100	91.057	Cercocebus_atys
ENSPVAG00000008644	LSM10	100	95.935	ENSCLAG00000008633	LSM10	100	95.935	Chinchilla_lanigera
ENSPVAG00000008644	LSM10	100	91.057	ENSCSAG00000000134	LSM10	100	91.057	Chlorocebus_sabaeus
ENSPVAG00000008644	LSM10	100	89.600	ENSCHOG00000008615	LSM10	100	89.600	Choloepus_hoffmanni
ENSPVAG00000008644	LSM10	83	32.353	ENSCSAVG00000001896	-	87	32.353	Ciona_savignyi
ENSPVAG00000008644	LSM10	100	91.057	ENSCANG00000019928	LSM10	100	91.057	Colobus_angolensis_palliatus
ENSPVAG00000008644	LSM10	87	86.239	ENSCGRG00001022673	-	89	86.239	Cricetulus_griseus_chok1gshd
ENSPVAG00000008644	LSM10	98	90.083	ENSCGRG00001004317	-	99	90.083	Cricetulus_griseus_chok1gshd
ENSPVAG00000008644	LSM10	87	86.239	ENSCGRG00000015514	-	89	86.239	Cricetulus_griseus_crigri
ENSPVAG00000008644	LSM10	98	90.083	ENSCGRG00000014935	-	99	90.083	Cricetulus_griseus_crigri
ENSPVAG00000008644	LSM10	96	64.407	ENSCSEG00000010374	oscp1a	79	64.407	Cynoglossus_semilaevis
ENSPVAG00000008644	LSM10	97	64.706	ENSCVAG00000001536	oscp1a	90	64.706	Cyprinodon_variegatus
ENSPVAG00000008644	LSM10	69	70.588	ENSDARG00000109563	CABZ01074453.1	99	70.588	Danio_rerio
ENSPVAG00000008644	LSM10	98	71.074	ENSDARG00000101222	oscp1a	100	71.074	Danio_rerio
ENSPVAG00000008644	LSM10	99	91.803	ENSDNOG00000036662	LSM10	99	91.803	Dasypus_novemcinctus
ENSPVAG00000008644	LSM10	100	91.057	ENSDORG00000007579	Lsm10	100	91.057	Dipodomys_ordii
ENSPVAG00000008644	LSM10	94	30.508	FBgn0033554	Lsm10	82	30.508	Drosophila_melanogaster
ENSPVAG00000008644	LSM10	100	88.618	ENSETEG00000005703	LSM10	100	88.618	Echinops_telfairi
ENSPVAG00000008644	LSM10	95	52.137	ENSEBUG00000001312	oscp1a	96	52.137	Eptatretus_burgeri
ENSPVAG00000008644	LSM10	100	93.496	ENSEASG00005012194	LSM10	100	93.496	Equus_asinus_asinus
ENSPVAG00000008644	LSM10	100	94.309	ENSECAG00000005071	LSM10	100	94.309	Equus_caballus
ENSPVAG00000008644	LSM10	100	90.244	ENSEEUG00000012032	LSM10	100	90.244	Erinaceus_europaeus
ENSPVAG00000008644	LSM10	98	69.421	ENSELUG00000007452	oscp1a	99	69.421	Esox_lucius
ENSPVAG00000008644	LSM10	100	69.106	ENSFALG00000000851	LSM10	100	69.106	Ficedula_albicollis
ENSPVAG00000008644	LSM10	100	93.496	ENSFDAG00000021056	LSM10	100	93.496	Fukomys_damarensis
ENSPVAG00000008644	LSM10	89	69.091	ENSFHEG00000001058	oscp1a	95	69.091	Fundulus_heteroclitus
ENSPVAG00000008644	LSM10	91	63.717	ENSGMOG00000019832	oscp1a	95	63.717	Gadus_morhua
ENSPVAG00000008644	LSM10	100	72.358	ENSGALG00000002127	LSM10	100	72.358	Gallus_gallus
ENSPVAG00000008644	LSM10	91	60.870	ENSGAFG00000016445	oscp1a	93	60.870	Gambusia_affinis
ENSPVAG00000008644	LSM10	96	65.254	ENSGACG00000002329	oscp1a	97	65.254	Gasterosteus_aculeatus
ENSPVAG00000008644	LSM10	100	71.545	ENSGAGG00000024848	LSM10	100	71.545	Gopherus_agassizii
ENSPVAG00000008644	LSM10	100	90.244	ENSGGOG00000003556	LSM10	100	90.244	Gorilla_gorilla
ENSPVAG00000008644	LSM10	96	67.797	ENSHBUG00000001722	oscp1a	96	67.797	Haplochromis_burtoni
ENSPVAG00000008644	LSM10	100	93.496	ENSHGLG00000011625	LSM10	100	93.496	Heterocephalus_glaber_female
ENSPVAG00000008644	LSM10	100	93.496	ENSHGLG00100001769	LSM10	100	93.496	Heterocephalus_glaber_male
ENSPVAG00000008644	LSM10	86	67.925	ENSIPUG00000005808	oscp1a	92	67.925	Ictalurus_punctatus
ENSPVAG00000008644	LSM10	100	91.870	ENSSTOG00000000606	LSM10	100	91.870	Ictidomys_tridecemlineatus
ENSPVAG00000008644	LSM10	96	64.407	ENSKMAG00000012143	oscp1a	98	64.407	Kryptolebias_marmoratus
ENSPVAG00000008644	LSM10	98	65.000	ENSLBEG00000017764	oscp1a	98	65.000	Labrus_bergylta
ENSPVAG00000008644	LSM10	100	73.171	ENSLACG00000015904	LSM10	95	73.171	Latimeria_chalumnae
ENSPVAG00000008644	LSM10	98	70.833	ENSLOCG00000018277	oscp1a	98	70.833	Lepisosteus_oculatus
ENSPVAG00000008644	LSM10	100	90.244	ENSLAFG00000009600	LSM10	100	90.244	Loxodonta_africana
ENSPVAG00000008644	LSM10	100	91.057	ENSMFAG00000009115	LSM10	100	91.057	Macaca_fascicularis
ENSPVAG00000008644	LSM10	100	91.057	ENSMMUG00000017338	LSM10	100	91.057	Macaca_mulatta
ENSPVAG00000008644	LSM10	100	91.057	ENSMNEG00000020023	LSM10	100	91.057	Macaca_nemestrina
ENSPVAG00000008644	LSM10	100	91.057	ENSMLEG00000025150	LSM10	100	91.057	Mandrillus_leucophaeus
ENSPVAG00000008644	LSM10	98	66.667	ENSMAMG00000004427	oscp1a	98	66.667	Mastacembelus_armatus
ENSPVAG00000008644	LSM10	96	67.797	ENSMZEG00005026307	oscp1a	96	67.797	Maylandia_zebra
ENSPVAG00000008644	LSM10	100	71.545	ENSMGAG00000015707	LSM10	100	71.545	Meleagris_gallopavo
ENSPVAG00000008644	LSM10	98	87.603	ENSMAUG00000016624	Lsm10	99	87.603	Mesocricetus_auratus
ENSPVAG00000008644	LSM10	98	88.430	ENSMOCG00000021943	Lsm10	99	88.430	Microtus_ochrogaster
ENSPVAG00000008644	LSM10	98	64.167	ENSMMOG00000013597	oscp1a	90	64.167	Mola_mola
ENSPVAG00000008644	LSM10	100	82.927	ENSMODG00000023328	LSM10	100	82.927	Monodelphis_domestica
ENSPVAG00000008644	LSM10	98	88.430	MGP_CAROLIEiJ_G0026467	Lsm10	100	89.247	Mus_caroli
ENSPVAG00000008644	LSM10	98	89.256	ENSMUSG00000050188	Lsm10	100	90.323	Mus_musculus
ENSPVAG00000008644	LSM10	98	89.256	MGP_PahariEiJ_G0028798	Lsm10	100	90.323	Mus_pahari
ENSPVAG00000008644	LSM10	98	89.256	MGP_SPRETEiJ_G0027446	Lsm10	100	90.323	Mus_spretus
ENSPVAG00000008644	LSM10	100	95.122	ENSMPUG00000018593	LSM10	100	95.122	Mustela_putorius_furo
ENSPVAG00000008644	LSM10	100	92.683	ENSMLUG00000023895	LSM10	100	92.683	Myotis_lucifugus
ENSPVAG00000008644	LSM10	100	89.431	ENSNGAG00000015011	Lsm10	100	89.431	Nannospalax_galili
ENSPVAG00000008644	LSM10	96	68.644	ENSNBRG00000014306	oscp1a	96	68.644	Neolamprologus_brichardi
ENSPVAG00000008644	LSM10	100	91.870	ENSNLEG00000033754	LSM10	100	91.870	Nomascus_leucogenys
ENSPVAG00000008644	LSM10	100	83.740	ENSMEUG00000006313	LSM10	100	83.740	Notamacropus_eugenii
ENSPVAG00000008644	LSM10	100	90.244	ENSOPRG00000001699	LSM10	100	90.244	Ochotona_princeps
ENSPVAG00000008644	LSM10	100	95.935	ENSODEG00000019161	LSM10	100	95.935	Octodon_degus
ENSPVAG00000008644	LSM10	96	68.644	ENSONIG00000020904	oscp1a	97	68.644	Oreochromis_niloticus
ENSPVAG00000008644	LSM10	100	76.423	ENSOANG00000002066	LSM10	100	76.423	Ornithorhynchus_anatinus
ENSPVAG00000008644	LSM10	100	89.431	ENSOCUG00000005333	LSM10	100	89.431	Oryctolagus_cuniculus
ENSPVAG00000008644	LSM10	97	66.387	ENSORLG00000009504	oscp1a	98	66.387	Oryzias_latipes
ENSPVAG00000008644	LSM10	97	66.387	ENSORLG00020016201	oscp1a	98	66.387	Oryzias_latipes_hni
ENSPVAG00000008644	LSM10	97	67.227	ENSORLG00015007794	oscp1a	98	67.227	Oryzias_latipes_hsok
ENSPVAG00000008644	LSM10	100	91.057	ENSOGAG00000002653	LSM10	100	91.057	Otolemur_garnettii
ENSPVAG00000008644	LSM10	98	92.500	ENSOARG00000009596	LSM10	98	92.500	Ovis_aries
ENSPVAG00000008644	LSM10	100	91.057	ENSPPAG00000023465	LSM10	100	91.057	Pan_paniscus
ENSPVAG00000008644	LSM10	100	93.496	ENSPPRG00000014619	LSM10	100	93.496	Panthera_pardus
ENSPVAG00000008644	LSM10	100	93.496	ENSPTIG00000004613	LSM10	100	93.496	Panthera_tigris_altaica
ENSPVAG00000008644	LSM10	100	91.057	ENSPTRG00000000539	LSM10	100	91.057	Pan_troglodytes
ENSPVAG00000008644	LSM10	100	91.057	ENSPANG00000023172	LSM10	100	91.057	Papio_anubis
ENSPVAG00000008644	LSM10	98	65.833	ENSPKIG00000003728	oscp1a	97	65.833	Paramormyrops_kingsleyae
ENSPVAG00000008644	LSM10	100	71.545	ENSPSIG00000000590	LSM10	100	71.545	Pelodiscus_sinensis
ENSPVAG00000008644	LSM10	62	64.474	ENSPMGG00000015718	oscp1a	99	64.474	Periophthalmus_magnuspinnatus
ENSPVAG00000008644	LSM10	84	83.495	ENSPCIG00000014865	LSM10	76	83.495	Phascolarctos_cinereus
ENSPVAG00000008644	LSM10	91	66.964	ENSPFOG00000020490	oscp1a	95	66.964	Poecilia_formosa
ENSPVAG00000008644	LSM10	91	66.964	ENSPLAG00000016537	oscp1a	85	66.964	Poecilia_latipinna
ENSPVAG00000008644	LSM10	88	67.593	ENSPMEG00000000174	oscp1a	94	67.593	Poecilia_mexicana
ENSPVAG00000008644	LSM10	91	66.071	ENSPREG00000009899	oscp1a	85	66.071	Poecilia_reticulata
ENSPVAG00000008644	LSM10	100	91.057	ENSPPYG00000001539	LSM10	100	91.057	Pongo_abelii
ENSPVAG00000008644	LSM10	96	90.678	ENSPCAG00000002520	LSM10	97	90.678	Procavia_capensis
ENSPVAG00000008644	LSM10	96	67.797	ENSPNYG00000003138	oscp1a	96	67.797	Pundamilia_nyererei
ENSPVAG00000008644	LSM10	95	66.667	ENSPNAG00000028829	oscp1a	97	66.667	Pygocentrus_nattereri
ENSPVAG00000008644	LSM10	98	90.083	ENSRNOG00000025716	Lsm10	99	90.083	Rattus_norvegicus
ENSPVAG00000008644	LSM10	100	91.057	ENSRBIG00000001561	LSM10	100	91.057	Rhinopithecus_bieti
ENSPVAG00000008644	LSM10	100	91.057	ENSRROG00000011414	LSM10	100	91.057	Rhinopithecus_roxellana
ENSPVAG00000008644	LSM10	100	90.244	ENSSBOG00000036413	-	100	90.244	Saimiri_boliviensis_boliviensis
ENSPVAG00000008644	LSM10	100	82.927	ENSSHAG00000018056	LSM10	100	82.927	Sarcophilus_harrisii
ENSPVAG00000008644	LSM10	98	66.942	ENSSFOG00015019954	lsm10	99	66.942	Scleropages_formosus
ENSPVAG00000008644	LSM10	93	66.957	ENSSMAG00000001297	oscp1a	98	66.957	Scophthalmus_maximus
ENSPVAG00000008644	LSM10	98	64.463	ENSSDUG00000007090	oscp1a	98	64.463	Seriola_dumerili
ENSPVAG00000008644	LSM10	94	65.517	ENSSLDG00000000800	oscp1a	96	65.517	Seriola_lalandi_dorsalis
ENSPVAG00000008644	LSM10	100	91.200	ENSSARG00000004211	LSM10	100	92.800	Sorex_araneus
ENSPVAG00000008644	LSM10	94	67.241	ENSSPAG00000009229	oscp1a	96	67.241	Stegastes_partitus
ENSPVAG00000008644	LSM10	100	89.431	ENSSSCG00000038916	LSM10	100	89.431	Sus_scrofa
ENSPVAG00000008644	LSM10	99	70.492	ENSTGUG00000001600	-	100	70.492	Taeniopygia_guttata
ENSPVAG00000008644	LSM10	99	70.492	ENSTGUG00000001602	-	100	70.492	Taeniopygia_guttata
ENSPVAG00000008644	LSM10	97	67.227	ENSTRUG00000010531	oscp1a	96	67.227	Takifugu_rubripes
ENSPVAG00000008644	LSM10	100	89.431	ENSTBEG00000016674	LSM10	100	89.431	Tupaia_belangeri
ENSPVAG00000008644	LSM10	100	92.683	ENSUAMG00000020265	LSM10	100	92.683	Ursus_americanus
ENSPVAG00000008644	LSM10	100	92.683	ENSUMAG00000001438	LSM10	57	92.683	Ursus_maritimus
ENSPVAG00000008644	LSM10	100	95.122	ENSVVUG00000023209	LSM10	100	95.122	Vulpes_vulpes
ENSPVAG00000008644	LSM10	100	70.732	ENSXETG00000027631	lsm10	100	70.732	Xenopus_tropicalis
ENSPVAG00000008644	LSM10	96	63.559	ENSXCOG00000018776	oscp1a	74	63.559	Xiphophorus_couchianus
ENSPVAG00000008644	LSM10	95	63.333	ENSXMAG00000019963	oscp1a	96	63.333	Xiphophorus_maculatus