EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPVAG00000009222 (Gene tree)
Gene ID: -
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Pteropus_vampyrus
Status: putative
Strand: Plus strand
Length: 10333 bases
Position: chrGeneScaffold_1446:7299-17631
Accession: 105302506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPVAP00000008698	TruB_N	PF01509.18	2.6e-21	1	1
ENSPVAP00000008698	PUA	PF01472.20	2.2e-19	1	1
ENSPVAP00000008698	DKCLD	PF08068.12	7.8e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPVAT00000009223	DKC1-201	1503	-	ENSPVAP00000008698	500 (aa)	XP_011373875	UPI00018B1A22

Gene Model

Click here to download ENSPVAG00000009222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPVAG00000009222's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPVAG00000009222	DKC1	97	90.342	ENSG00000130826	DKC1	99	97.073	Homo_sapiens
ENSPVAG00000009222	DKC1	86	82.367	ENSAPOG00000007799	dkc1	84	82.367	Acanthochromis_polyacanthus
ENSPVAG00000009222	DKC1	89	92.998	ENSAMEG00000002776	DKC1	99	90.963	Ailuropoda_melanoleuca
ENSPVAG00000009222	DKC1	86	81.395	ENSACIG00000022614	dkc1	86	81.395	Amphilophus_citrinellus
ENSPVAG00000009222	DKC1	86	82.135	ENSAOCG00000013159	dkc1	87	80.698	Amphiprion_ocellaris
ENSPVAG00000009222	DKC1	86	82.135	ENSAPEG00000002284	dkc1	86	82.201	Amphiprion_percula
ENSPVAG00000009222	DKC1	86	80.320	ENSATEG00000013682	dkc1	86	79.954	Anabas_testudineus
ENSPVAG00000009222	DKC1	86	84.091	ENSACAG00000015600	DKC1	76	84.091	Anolis_carolinensis
ENSPVAG00000009222	DKC1	96	89.228	ENSANAG00000022732	DKC1	97	89.135	Aotus_nancymaae
ENSPVAG00000009222	DKC1	79	85.606	ENSACLG00000015605	dkc1	81	85.606	Astatotilapia_calliptera
ENSPVAG00000009222	DKC1	87	80.734	ENSAMXG00000017108	dkc1	84	80.278	Astyanax_mexicanus
ENSPVAG00000009222	DKC1	97	90.081	ENSBTAG00000013045	DKC1	97	89.879	Bos_taurus
ENSPVAG00000009222	DKC1	82	66.019	WBGene00010478	K01G5.5	98	63.908	Caenorhabditis_elegans
ENSPVAG00000009222	DKC1	97	89.960	ENSCJAG00000004210	DKC1	97	89.960	Callithrix_jacchus
ENSPVAG00000009222	DKC1	93	78.616	ENSCAFG00000009311	-	97	77.309	Canis_familiaris
ENSPVAG00000009222	DKC1	97	88.317	ENSCAFG00000019620	-	97	88.492	Canis_familiaris
ENSPVAG00000009222	DKC1	93	78.647	ENSCAFG00020009379	-	93	77.328	Canis_lupus_dingo
ENSPVAG00000009222	DKC1	97	88.317	ENSCAFG00020008918	-	97	88.492	Canis_lupus_dingo
ENSPVAG00000009222	DKC1	97	88.664	ENSCHIG00000017392	DKC1	97	90.283	Capra_hircus
ENSPVAG00000009222	DKC1	96	88.024	ENSTSYG00000007681	DKC1	96	88.224	Carlito_syrichta
ENSPVAG00000009222	DKC1	84	90.323	ENSCAPG00000003342	DKC1	99	89.631	Cavia_aperea
ENSPVAG00000009222	DKC1	97	89.357	ENSCPOG00000008825	DKC1	99	88.431	Cavia_porcellus
ENSPVAG00000009222	DKC1	97	81.452	ENSCCAG00000027418	DKC1	96	81.048	Cebus_capucinus
ENSPVAG00000009222	DKC1	97	89.940	ENSCATG00000033602	DKC1	97	89.537	Cercocebus_atys
ENSPVAG00000009222	DKC1	99	89.130	ENSCLAG00000000720	DKC1	99	89.130	Chinchilla_lanigera
ENSPVAG00000009222	DKC1	97	89.940	ENSCSAG00000006706	DKC1	97	89.537	Chlorocebus_sabaeus
ENSPVAG00000009222	DKC1	86	85.517	ENSCPBG00000005858	DKC1	88	88.808	Chrysemys_picta_bellii
ENSPVAG00000009222	DKC1	82	76.039	ENSCING00000004599	-	80	76.271	Ciona_intestinalis
ENSPVAG00000009222	DKC1	78	78.517	ENSCSAVG00000010047	-	96	73.131	Ciona_savignyi
ENSPVAG00000009222	DKC1	97	89.940	ENSCANG00000027987	DKC1	97	89.537	Colobus_angolensis_palliatus
ENSPVAG00000009222	DKC1	99	87.500	ENSCGRG00001014574	-	99	87.500	Cricetulus_griseus_chok1gshd
ENSPVAG00000009222	DKC1	96	66.183	ENSCGRG00001016789	-	94	67.538	Cricetulus_griseus_chok1gshd
ENSPVAG00000009222	DKC1	98	65.720	ENSCGRG00000014809	-	93	67.387	Cricetulus_griseus_crigri
ENSPVAG00000009222	DKC1	99	87.500	ENSCGRG00000016075	-	99	87.500	Cricetulus_griseus_crigri
ENSPVAG00000009222	DKC1	93	78.448	ENSCSEG00000012633	dkc1	89	81.967	Cynoglossus_semilaevis
ENSPVAG00000009222	DKC1	85	81.265	ENSCVAG00000010155	dkc1	83	82.009	Cyprinodon_variegatus
ENSPVAG00000009222	DKC1	80	85.464	ENSDARG00000016484	dkc1	84	81.352	Danio_rerio
ENSPVAG00000009222	DKC1	99	88.477	ENSDNOG00000004218	DKC1	99	88.672	Dasypus_novemcinctus
ENSPVAG00000009222	DKC1	60	82.000	ENSDORG00000013566	-	100	82.000	Dipodomys_ordii
ENSPVAG00000009222	DKC1	94	65.756	FBgn0259937	Nop60B	89	67.980	Drosophila_melanogaster
ENSPVAG00000009222	DKC1	86	86.036	ENSETEG00000016095	DKC1	90	86.036	Echinops_telfairi
ENSPVAG00000009222	DKC1	68	77.219	ENSEBUG00000015962	dkc1	99	81.570	Eptatretus_burgeri
ENSPVAG00000009222	DKC1	99	90.559	ENSEASG00005007484	DKC1	99	90.559	Equus_asinus_asinus
ENSPVAG00000009222	DKC1	99	90.559	ENSECAG00000023524	DKC1	99	90.559	Equus_caballus
ENSPVAG00000009222	DKC1	83	88.498	ENSEEUG00000003323	DKC1	100	88.732	Erinaceus_europaeus
ENSPVAG00000009222	DKC1	86	82.009	ENSELUG00000014538	dkc1	85	81.019	Esox_lucius
ENSPVAG00000009222	DKC1	99	90.963	ENSFCAG00000006577	DKC1	99	90.963	Felis_catus
ENSPVAG00000009222	DKC1	85	83.486	ENSFALG00000011496	DKC1	85	82.327	Ficedula_albicollis
ENSPVAG00000009222	DKC1	96	89.206	ENSFDAG00000002516	DKC1	99	88.911	Fukomys_damarensis
ENSPVAG00000009222	DKC1	86	80.886	ENSFHEG00000004627	dkc1	85	81.250	Fundulus_heteroclitus
ENSPVAG00000009222	DKC1	78	82.864	ENSGMOG00000017277	dkc1	100	82.864	Gadus_morhua
ENSPVAG00000009222	DKC1	85	85.581	ENSGALG00000005054	DKC1	86	83.784	Gallus_gallus
ENSPVAG00000009222	DKC1	86	81.163	ENSGAFG00000011486	dkc1	74	81.163	Gambusia_affinis
ENSPVAG00000009222	DKC1	79	86.364	ENSGACG00000004373	dkc1	96	88.450	Gasterosteus_aculeatus
ENSPVAG00000009222	DKC1	86	85.977	ENSGAGG00000011330	DKC1	84	86.207	Gopherus_agassizii
ENSPVAG00000009222	DKC1	97	90.342	ENSGGOG00000001045	DKC1	97	89.940	Gorilla_gorilla
ENSPVAG00000009222	DKC1	86	81.628	ENSHBUG00000012436	dkc1	86	81.250	Haplochromis_burtoni
ENSPVAG00000009222	DKC1	97	87.000	ENSHGLG00000000649	DKC1	99	88.327	Heterocephalus_glaber_female
ENSPVAG00000009222	DKC1	96	87.247	ENSHGLG00100001153	DKC1	99	88.583	Heterocephalus_glaber_male
ENSPVAG00000009222	DKC1	85	81.542	ENSHCOG00000021099	dkc1	85	81.542	Hippocampus_comes
ENSPVAG00000009222	DKC1	86	80.365	ENSIPUG00000010309	dkc1	88	78.214	Ictalurus_punctatus
ENSPVAG00000009222	DKC1	97	79.158	ENSSTOG00000011904	-	93	79.359	Ictidomys_tridecemlineatus
ENSPVAG00000009222	DKC1	99	82.271	ENSSTOG00000020149	-	99	82.470	Ictidomys_tridecemlineatus
ENSPVAG00000009222	DKC1	91	90.792	ENSSTOG00000001074	-	96	90.792	Ictidomys_tridecemlineatus
ENSPVAG00000009222	DKC1	60	83.333	ENSJJAG00000010086	-	100	83.333	Jaculus_jaculus
ENSPVAG00000009222	DKC1	85	80.235	ENSKMAG00000008010	dkc1	85	80.425	Kryptolebias_marmoratus
ENSPVAG00000009222	DKC1	85	81.030	ENSLBEG00000019122	dkc1	89	80.742	Labrus_bergylta
ENSPVAG00000009222	DKC1	87	83.562	ENSLACG00000014025	DKC1	91	89.196	Latimeria_chalumnae
ENSPVAG00000009222	DKC1	87	83.066	ENSLOCG00000013713	dkc1	88	85.071	Lepisosteus_oculatus
ENSPVAG00000009222	DKC1	96	88.415	ENSLAFG00000000221	DKC1	96	88.211	Loxodonta_africana
ENSPVAG00000009222	DKC1	97	90.141	ENSMFAG00000032398	DKC1	83	90.342	Macaca_fascicularis
ENSPVAG00000009222	DKC1	97	89.940	ENSMMUG00000005768	DKC1	97	89.537	Macaca_mulatta
ENSPVAG00000009222	DKC1	97	89.940	ENSMNEG00000034503	DKC1	97	89.537	Macaca_nemestrina
ENSPVAG00000009222	DKC1	97	89.940	ENSMLEG00000034422	DKC1	97	89.537	Mandrillus_leucophaeus
ENSPVAG00000009222	DKC1	80	86.000	ENSMAMG00000005427	dkc1	89	86.616	Mastacembelus_armatus
ENSPVAG00000009222	DKC1	86	81.860	ENSMZEG00005014503	dkc1	86	81.481	Maylandia_zebra
ENSPVAG00000009222	DKC1	77	84.987	ENSMGAG00000009238	DKC1	87	83.623	Meleagris_gallopavo
ENSPVAG00000009222	DKC1	60	82.667	ENSMAUG00000016454	-	100	82.667	Mesocricetus_auratus
ENSPVAG00000009222	DKC1	85	80.499	ENSMICG00000002818	-	99	82.418	Microcebus_murinus
ENSPVAG00000009222	DKC1	97	88.623	ENSMICG00000038751	-	97	88.822	Microcebus_murinus
ENSPVAG00000009222	DKC1	60	79.667	ENSMOCG00000001169	-	100	79.667	Microtus_ochrogaster
ENSPVAG00000009222	DKC1	80	85.176	ENSMMOG00000020348	dkc1	87	85.176	Mola_mola
ENSPVAG00000009222	DKC1	85	86.946	ENSMODG00000009243	DKC1	79	84.581	Monodelphis_domestica
ENSPVAG00000009222	DKC1	86	81.352	ENSMALG00000009454	dkc1	84	81.352	Monopterus_albus
ENSPVAG00000009222	DKC1	99	77.799	MGP_CAROLIEiJ_G0033191	Dkc1	100	91.216	Mus_caroli
ENSPVAG00000009222	DKC1	99	86.640	ENSMUSG00000031403	Dkc1	99	87.230	Mus_musculus
ENSPVAG00000009222	DKC1	99	87.280	MGP_PahariEiJ_G0031735	Dkc1	100	87.280	Mus_pahari
ENSPVAG00000009222	DKC1	99	86.837	MGP_SPRETEiJ_G0034351	Dkc1	99	86.837	Mus_spretus
ENSPVAG00000009222	DKC1	97	87.698	ENSMPUG00000016136	DKC1	93	89.286	Mustela_putorius_furo
ENSPVAG00000009222	DKC1	90	89.371	ENSMLUG00000011918	DKC1	99	86.154	Myotis_lucifugus
ENSPVAG00000009222	DKC1	60	83.000	ENSNGAG00000015724	-	100	83.000	Nannospalax_galili
ENSPVAG00000009222	DKC1	79	86.111	ENSNBRG00000005638	dkc1	80	85.678	Neolamprologus_brichardi
ENSPVAG00000009222	DKC1	97	90.323	ENSNLEG00000014323	DKC1	96	89.919	Nomascus_leucogenys
ENSPVAG00000009222	DKC1	83	84.597	ENSMEUG00000001066	DKC1	92	85.000	Notamacropus_eugenii
ENSPVAG00000009222	DKC1	73	88.219	ENSOPRG00000005248	DKC1	73	88.219	Ochotona_princeps
ENSPVAG00000009222	DKC1	87	92.890	ENSODEG00000011816	-	91	89.827	Octodon_degus
ENSPVAG00000009222	DKC1	60	84.000	ENSODEG00000000549	-	100	84.000	Octodon_degus
ENSPVAG00000009222	DKC1	93	78.270	ENSONIG00000013889	dkc1	94	78.481	Oreochromis_niloticus
ENSPVAG00000009222	DKC1	65	63.429	ENSOANG00000022295	-	84	65.000	Ornithorhynchus_anatinus
ENSPVAG00000009222	DKC1	83	89.437	ENSOANG00000008713	-	88	89.437	Ornithorhynchus_anatinus
ENSPVAG00000009222	DKC1	97	89.315	ENSOCUG00000012646	DKC1	96	89.516	Oryctolagus_cuniculus
ENSPVAG00000009222	DKC1	91	77.753	ENSORLG00000018748	dkc1	84	80.047	Oryzias_latipes
ENSPVAG00000009222	DKC1	85	81.265	ENSOMEG00000005786	dkc1	82	85.774	Oryzias_melastigma
ENSPVAG00000009222	DKC1	97	87.747	ENSOGAG00000003399	DKC1	97	87.747	Otolemur_garnettii
ENSPVAG00000009222	DKC1	97	87.652	ENSOARG00000003047	DKC1	96	90.369	Ovis_aries
ENSPVAG00000009222	DKC1	97	90.141	ENSPPAG00000023820	DKC1	97	89.738	Pan_paniscus
ENSPVAG00000009222	DKC1	90	93.013	ENSPPRG00000009104	DKC1	99	90.963	Panthera_pardus
ENSPVAG00000009222	DKC1	88	93.651	ENSPTIG00000017469	DKC1	98	91.463	Panthera_tigris_altaica
ENSPVAG00000009222	DKC1	97	90.342	ENSPTRG00000043416	-	84	90.543	Pan_troglodytes
ENSPVAG00000009222	DKC1	97	90.342	ENSPTRG00000022449	DKC1	97	89.940	Pan_troglodytes
ENSPVAG00000009222	DKC1	97	89.940	ENSPANG00000011978	DKC1	97	89.537	Papio_anubis
ENSPVAG00000009222	DKC1	85	82.599	ENSPKIG00000008443	dkc1	84	87.089	Paramormyrops_kingsleyae
ENSPVAG00000009222	DKC1	72	92.179	ENSPSIG00000013765	DKC1	86	92.179	Pelodiscus_sinensis
ENSPVAG00000009222	DKC1	92	73.377	ENSPMGG00000004097	dkc1	73	81.818	Periophthalmus_magnuspinnatus
ENSPVAG00000009222	DKC1	96	52.410	ENSPEMG00000013348	Dkc1	99	94.359	Peromyscus_maniculatus_bairdii
ENSPVAG00000009222	DKC1	87	88.073	ENSPCIG00000016706	DKC1	76	86.475	Phascolarctos_cinereus
ENSPVAG00000009222	DKC1	86	81.439	ENSPFOG00000018653	dkc1	86	81.439	Poecilia_formosa
ENSPVAG00000009222	DKC1	86	81.439	ENSPLAG00000003272	dkc1	77	81.439	Poecilia_latipinna
ENSPVAG00000009222	DKC1	86	81.439	ENSPMEG00000010413	dkc1	86	81.439	Poecilia_mexicana
ENSPVAG00000009222	DKC1	86	81.671	ENSPREG00000004100	dkc1	84	80.974	Poecilia_reticulata
ENSPVAG00000009222	DKC1	96	90.428	ENSPPYG00000020892	DKC1	96	90.020	Pongo_abelii
ENSPVAG00000009222	DKC1	75	92.781	ENSPCAG00000015034	DKC1	73	92.781	Procavia_capensis
ENSPVAG00000009222	DKC1	97	89.718	ENSPCOG00000026874	DKC1	96	90.121	Propithecus_coquereli
ENSPVAG00000009222	DKC1	86	79.773	ENSPNYG00000020063	dkc1	88	79.773	Pundamilia_nyererei
ENSPVAG00000009222	DKC1	91	78.308	ENSPNAG00000005780	dkc1	89	78.876	Pygocentrus_nattereri
ENSPVAG00000009222	DKC1	100	81.128	ENSRNOG00000055562	Dkc1	100	81.128	Rattus_norvegicus
ENSPVAG00000009222	DKC1	97	89.940	ENSRBIG00000028457	DKC1	83	90.141	Rhinopithecus_bieti
ENSPVAG00000009222	DKC1	97	89.940	ENSRROG00000044780	DKC1	97	89.537	Rhinopithecus_roxellana
ENSPVAG00000009222	DKC1	78	70.153	YLR175W	-	85	68.127	Saccharomyces_cerevisiae
ENSPVAG00000009222	DKC1	97	90.342	ENSSBOG00000033746	DKC1	97	89.940	Saimiri_boliviensis_boliviensis
ENSPVAG00000009222	DKC1	89	86.253	ENSSHAG00000002463	DKC1	96	85.872	Sarcophilus_harrisii
ENSPVAG00000009222	DKC1	87	80.909	ENSSFOG00015009585	dkc1	89	79.869	Scleropages_formosus
ENSPVAG00000009222	DKC1	86	81.903	ENSSMAG00000002552	dkc1	82	84.767	Scophthalmus_maximus
ENSPVAG00000009222	DKC1	85	82.864	ENSSDUG00000009963	dkc1	85	82.367	Seriola_dumerili
ENSPVAG00000009222	DKC1	91	78.289	ENSSLDG00000019342	dkc1	86	81.206	Seriola_lalandi_dorsalis
ENSPVAG00000009222	DKC1	95	83.711	ENSSARG00000001822	DKC1	96	83.711	Sorex_araneus
ENSPVAG00000009222	DKC1	84	86.239	ENSSPUG00000018907	DKC1	84	84.910	Sphenodon_punctatus
ENSPVAG00000009222	DKC1	86	81.250	ENSSPAG00000002585	dkc1	81	81.250	Stegastes_partitus
ENSPVAG00000009222	DKC1	99	89.038	ENSSSCG00000012823	DKC1	99	89.038	Sus_scrofa
ENSPVAG00000009222	DKC1	77	84.987	ENSTGUG00000006781	DKC1	94	80.139	Taeniopygia_guttata
ENSPVAG00000009222	DKC1	94	77.731	ENSTRUG00000004413	dkc1	96	77.731	Takifugu_rubripes
ENSPVAG00000009222	DKC1	86	65.688	ENSTNIG00000002582	dkc1	87	65.688	Tetraodon_nigroviridis
ENSPVAG00000009222	DKC1	67	85.549	ENSTBEG00000011262	DKC1	95	86.994	Tupaia_belangeri
ENSPVAG00000009222	DKC1	69	99.278	ENSTTRG00000008089	DKC1	69	99.278	Tursiops_truncatus
ENSPVAG00000009222	DKC1	95	90.698	ENSUAMG00000022721	DKC1	93	93.409	Ursus_americanus
ENSPVAG00000009222	DKC1	95	90.928	ENSUMAG00000016899	DKC1	98	92.519	Ursus_maritimus
ENSPVAG00000009222	DKC1	99	87.308	ENSVVUG00000020734	-	87	87.723	Vulpes_vulpes
ENSPVAG00000009222	DKC1	93	72.059	ENSVVUG00000021671	-	91	73.511	Vulpes_vulpes
ENSPVAG00000009222	DKC1	89	82.735	ENSXETG00000032517	DKC1	85	83.796	Xenopus_tropicalis
ENSPVAG00000009222	DKC1	86	80.742	ENSXCOG00000005498	dkc1	92	80.742	Xiphophorus_couchianus
ENSPVAG00000009222	DKC1	86	81.206	ENSXMAG00000004919	dkc1	86	81.206	Xiphophorus_maculatus